RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 TBC1D8O95759 1140 aa14.46□□□□□ -0.09
SCLT1-202ENST00000439369 BMP15O95972 392 aa14.46□□□□□ -0.09
SCLT1-202ENST00000439369 GNRH1P01148 92 aa14.46□□□□□ -0.09
SCLT1-202ENST00000439369 CYP3A4P08684 503 aa14.46□□□□□ -0.09
SCLT1-202ENST00000439369 ARHGEF6Q15052 776 aa14.46□□□□□ -0.09
SCLT1-202ENST00000439369 WDR78Q5VTH9 848 aa14.46□□□□□ -0.09
SCLT1-202ENST00000439369 NEK8Q86SG6 692 aa14.46□□□□□ -0.09
SCLT1-202ENST00000439369 FCHSD1Q86WN1 690 aa14.46□□□□□ -0.09
SCLT1-202ENST00000439369 TBCKQ8TEA7 893 aa14.46□□□□□ -0.09
SCLT1-202ENST00000439369 RMDN3Q96TC7 470 aa14.46□□□□□ -0.09
SCLT1-202ENST00000439369 PXMP2Q9NR77 195 aa14.46□□□□□ -0.09
SCLT1-202ENST00000439369 WBP1LQ9NX94 342 aa14.46□□□□□ -0.09
SCLT1-202ENST00000439369 COL20A1Q9P218 1284 aa14.46□□□□□ -0.09
SCLT1-202ENST00000439369 MORC2Q9Y6X9 1032 aaPredicted RBP14.46□□□□□ -0.09
SCLT1-202ENST00000439369 SMCHD1A6NHR9 2005 aa14.46□□□□□ -0.1
SCLT1-202ENST00000439369 CYP3A7-CYP3A51PA0A087WV96 503 aa14.45□□□□□ -0.1
SCLT1-202ENST00000439369 GPR25O00155 361 aa14.45□□□□□ -0.1
SCLT1-202ENST00000439369 TNPO2O14787 897 aaKnown RBP14.45□□□□□ -0.1
SCLT1-202ENST00000439369 HOXC6P09630 235 aa14.45□□□□□ -0.1
SCLT1-202ENST00000439369 CYP3A7P24462 503 aa14.45□□□□□ -0.1
SCLT1-202ENST00000439369 ADORA2AP29274 412 aa14.45□□□□□ -0.1
SCLT1-202ENST00000439369 CIITAP33076 1130 aa14.45□□□□□ -0.1
SCLT1-202ENST00000439369 ARHGAP4P98171 946 aa14.45□□□□□ -0.1
SCLT1-202ENST00000439369 MORN1Q5T089 497 aa14.45□□□□□ -0.1
SCLT1-202ENST00000439369 PCNX4Q63HM2 1172 aa14.45□□□□□ -0.1
SCLT1-202ENST00000439369 PPP4R3AQ6IN85 833 aa14.45□□□□□ -0.1
SCLT1-202ENST00000439369 CLEC17AQ6ZS10 378 aa14.45□□□□□ -0.1
SCLT1-202ENST00000439369 MSL3Q8N5Y2 521 aaKnown RBP14.45□□□□□ -0.1
SCLT1-202ENST00000439369 PDCD2LQ9BRP1 358 aa14.45□□□□□ -0.1
SCLT1-202ENST00000439369 R3HDMLQ9H3Y0 253 aa14.45□□□□□ -0.1
SCLT1-202ENST00000439369 CFAP45Q9UL16 551 aa14.45□□□□□ -0.1
SCLT1-202ENST00000439369 PLXNB2O15031 1838 aa14.45□□□□□ -0.1
SCLT1-202ENST00000439369 EDNRBP24530 442 aa14.44□□□□□ -0.1
SCLT1-202ENST00000439369 CCND2P30279 289 aa14.44□□□□□ -0.1
SCLT1-202ENST00000439369 MAP2K5Q13163 448 aa14.44□□□□□ -0.1
SCLT1-202ENST00000439369 INF2Q27J81 1249 aa14.44□□□□□ -0.1
SCLT1-202ENST00000439369 ZNF792Q3KQV3 632 aa14.44□□□□□ -0.1
SCLT1-202ENST00000439369 EARS2Q5JPH6 523 aaKnown RBP14.44□□□□□ -0.1
SCLT1-202ENST00000439369 FOXD4L5Q5VV16 416 aaPredicted RBP14.44□□□□□ -0.1
SCLT1-202ENST00000439369 ARHGEF16Q5VV41 709 aa14.44□□□□□ -0.1
SCLT1-202ENST00000439369 NIPA1Q7RTP0 329 aa14.44□□□□□ -0.1
SCLT1-202ENST00000439369 JMYQ8N9B5 988 aa14.44□□□□□ -0.1
SCLT1-202ENST00000439369 MORC4Q8TE76 937 aa14.44□□□□□ -0.1
SCLT1-202ENST00000439369 FOXD4L4Q8WXT5 416 aaPredicted RBP14.44□□□□□ -0.1
SCLT1-202ENST00000439369 USP6NLQ92738 828 aa14.44□□□□□ -0.1
SCLT1-202ENST00000439369 ERO1AQ96HE7 468 aa14.44□□□□□ -0.1
SCLT1-202ENST00000439369 MBOAT7Q96N66 472 aa14.44□□□□□ -0.1
SCLT1-202ENST00000439369 TAAR1Q96RJ0 339 aa14.44□□□□□ -0.1
SCLT1-202ENST00000439369 NUDT12Q9BQG2 462 aa14.44□□□□□ -0.1
SCLT1-202ENST00000439369 POLR3EQ9NVU0 708 aa14.44□□□□□ -0.1
SCLT1-202ENST00000439369 CEP131Q9UPN4 1083 aa14.44□□□□□ -0.1
SCLT1-202ENST00000439369 SOWAHBA6NEL2 793 aa14.43□□□□□ -0.1
SCLT1-202ENST00000439369 FAM205CA6NFA0 338 aa14.43□□□□□ -0.1
SCLT1-202ENST00000439369 ASB14A6NK59 587 aa14.43□□□□□ -0.1
SCLT1-202ENST00000439369 FKTNO75072 461 aa14.43□□□□□ -0.1
SCLT1-202ENST00000439369 RGS2P41220 211 aa14.43□□□□□ -0.1
SCLT1-202ENST00000439369 PSMC4P43686 418 aa14.43□□□□□ -0.1
SCLT1-202ENST00000439369 TOB1P50616 345 aaPredicted RBP14.43□□□□□ -0.1
SCLT1-202ENST00000439369 ALDH5A1P51649 535 aaPredicted RBP14.43□□□□□ -0.1
SCLT1-202ENST00000439369 KRT85P78386 507 aa14.43□□□□□ -0.1
SCLT1-202ENST00000439369 CNTN2Q02246 1040 aa14.43□□□□□ -0.1
SCLT1-202ENST00000439369 IRF5Q13568 498 aa14.43□□□□□ -0.1
SCLT1-202ENST00000439369 PGM5Q15124 567 aa14.43□□□□□ -0.1
SCLT1-202ENST00000439369 TTC38Q5R3I4 469 aa14.43□□□□□ -0.1
SCLT1-202ENST00000439369 VSIG10LQ86VR7 867 aa14.43□□□□□ -0.1
SCLT1-202ENST00000439369 TNPO1Q92973 898 aaKnown RBP14.43□□□□□ -0.1
SCLT1-202ENST00000439369 RTEL1Q9NZ71 1219 aa14.43□□□□□ -0.1
SCLT1-202ENST00000439369 LAD1O00515 517 aa14.42□□□□□ -0.1
SCLT1-202ENST00000439369 COBLO75128 1261 aa14.42□□□□□ -0.1
SCLT1-202ENST00000439369 YEATS4O95619 227 aa14.42□□□□□ -0.1
SCLT1-202ENST00000439369 NR3C2P08235 984 aa14.42□□□□□ -0.1
SCLT1-202ENST00000439369 XRCC5P13010 732 aaKnown RBP14.42□□□□□ -0.1
SCLT1-202ENST00000439369 HOXD10P28358 340 aa14.42□□□□□ -0.1
SCLT1-202ENST00000439369 NASPP49321 788 aaPredicted RBP14.42□□□□□ -0.1
SCLT1-202ENST00000439369 PRMT2P55345 433 aa14.42□□□□□ -0.1
SCLT1-202ENST00000439369 LETM2Q2VYF4 491 aa14.42□□□□□ -0.1
SCLT1-202ENST00000439369 MAMDC4Q6UXC1 1216 aa14.42□□□□□ -0.1
SCLT1-202ENST00000439369 DPP9Q86TI2 863 aa14.42□□□□□ -0.1
SCLT1-202ENST00000439369 TRMT44Q8IYL2 757 aaKnown RBP14.42□□□□□ -0.1
SCLT1-202ENST00000439369 PGBD1Q96JS3 809 aa14.42□□□□□ -0.1
SCLT1-202ENST00000439369 TRIM47Q96LD4 638 aa14.42□□□□□ -0.1
SCLT1-202ENST00000439369 APBA2Q99767 749 aa14.42□□□□□ -0.1
SCLT1-202ENST00000439369 SCAND2PQ9GZW5 306 aaPredicted RBP14.42□□□□□ -0.1
SCLT1-202ENST00000439369 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.42□□□□□ -0.1
SCLT1-202ENST00000439369 GJD2Q9UKL4 321 aa14.42□□□□□ -0.1
SCLT1-202ENST00000439369 SYNGAP1Q96PV0 1343 aa14.41□□□□□ -0.1
SCLT1-202ENST00000439369 LCTP09848 1927 aa14.41□□□□□ -0.1
SCLT1-202ENST00000439369 MYH15Q9Y2K3 1946 aa14.41□□□□□ -0.1
SCLT1-202ENST00000439369 MAFGO15525 162 aa14.41□□□□□ -0.1
SCLT1-202ENST00000439369 EIF3JO75822 258 aaKnown RBP14.41□□□□□ -0.1
SCLT1-202ENST00000439369 PGK2P07205 417 aa14.41□□□□□ -0.1
SCLT1-202ENST00000439369 EIF2AK2P19525 551 aaKnown RBP14.41□□□□□ -0.1
SCLT1-202ENST00000439369 SETQ01105 290 aaPredicted RBP14.41□□□□□ -0.1
SCLT1-202ENST00000439369 DNM1Q05193 864 aaKnown RBP14.41□□□□□ -0.1
SCLT1-202ENST00000439369 STXBP2Q15833 593 aa14.41□□□□□ -0.1
SCLT1-202ENST00000439369 Q4G0T1 1027 aa14.41□□□□□ -0.1
SCLT1-202ENST00000439369 CEP55Q53EZ4 464 aa14.41□□□□□ -0.1
SCLT1-202ENST00000439369 ANO1Q5XXA6 986 aa14.41□□□□□ -0.1
SCLT1-202ENST00000439369 OLFML2BQ68BL8 750 aa14.41□□□□□ -0.1
SCLT1-202ENST00000439369 CDHR1Q96JP9 859 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms