RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 SNED1Q8TER0 1413 aa17.12■□□□□ 0.33
APP-208ENST00000439274 ZC3H4Q9UPT8 1303 aaKnown RBP17.12■□□□□ 0.33
APP-208ENST00000439274 CDK8P49336 464 aa17.12■□□□□ 0.33
APP-208ENST00000439274 TPTE2Q6XPS3 522 aa17.12■□□□□ 0.33
APP-208ENST00000439274 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.12■□□□□ 0.33
APP-208ENST00000439274 ACBD3Q9H3P7 528 aa17.12■□□□□ 0.33
APP-208ENST00000439274 MED4Q9NPJ6 270 aa17.12■□□□□ 0.33
APP-208ENST00000439274 TAF1LQ8IZX4 1826 aa17.12■□□□□ 0.33
APP-208ENST00000439274 MYMKA6NI61 221 aa17.12■□□□□ 0.33
APP-208ENST00000439274 TRIM66O15016 1216 aa17.12■□□□□ 0.33
APP-208ENST00000439274 GNPATO15228 680 aa17.12■□□□□ 0.33
APP-208ENST00000439274 GRB10Q13322 594 aa17.12■□□□□ 0.33
APP-208ENST00000439274 SPA17Q15506 151 aa17.12■□□□□ 0.33
APP-208ENST00000439274 EZH2Q15910 746 aaKnown RBP17.12■□□□□ 0.33
APP-208ENST00000439274 CNNM4Q6P4Q7 775 aa17.12■□□□□ 0.33
APP-208ENST00000439274 TMED8Q6PL24 325 aaPredicted RBP17.12■□□□□ 0.33
APP-208ENST00000439274 SEPT12Q8IYM1 358 aa17.12■□□□□ 0.33
APP-208ENST00000439274 RRP36Q96EU6 259 aaKnown RBP17.12■□□□□ 0.33
APP-208ENST00000439274 LZTS2Q9BRK4 669 aa17.12■□□□□ 0.33
APP-208ENST00000439274 BLOC1S4Q9NUP1 217 aa17.12■□□□□ 0.33
APP-208ENST00000439274 CWC15Q9P013 229 aaKnown RBP17.12■□□□□ 0.33
APP-208ENST00000439274 TARSL2A2RTX5 802 aaKnown RBP17.11■□□□□ 0.33
APP-208ENST00000439274 ZPR1O75312 459 aa17.11■□□□□ 0.33
APP-208ENST00000439274 MOCS3O95396 460 aa17.11■□□□□ 0.33
APP-208ENST00000439274 SEMA3FQ13275 785 aa17.11■□□□□ 0.33
APP-208ENST00000439274 SOGA3Q5TF21 947 aa17.11■□□□□ 0.33
APP-208ENST00000439274 COG1Q8WTW3 980 aa17.11■□□□□ 0.33
APP-208ENST00000439274 CALML4Q96GE6 196 aa17.11■□□□□ 0.33
APP-208ENST00000439274 PSMB7Q99436 277 aa17.11■□□□□ 0.33
APP-208ENST00000439274 RTFDC1Q9BY42 306 aaPredicted RBP17.11■□□□□ 0.33
APP-208ENST00000439274 SMARCAL1Q9NZC9 954 aa17.11■□□□□ 0.33
APP-208ENST00000439274 NAV1Q8NEY1 1877 aa17.11■□□□□ 0.33
APP-208ENST00000439274 CNTNAP4Q9C0A0 1308 aa17.11■□□□□ 0.33
APP-208ENST00000439274 A0A1W2PQJ5 194 aa17.11■□□□□ 0.33
APP-208ENST00000439274 ANO9A1A5B4 782 aa17.11■□□□□ 0.33
APP-208ENST00000439274 GNA11P29992 359 aa17.11■□□□□ 0.33
APP-208ENST00000439274 BTDP43251 543 aa17.11■□□□□ 0.33
APP-208ENST00000439274 AARSP49588 968 aaKnown RBP eCLIP17.11■□□□□ 0.33
APP-208ENST00000439274 AMPD3Q01432 767 aa17.11■□□□□ 0.33
APP-208ENST00000439274 MAP9Q49MG5 647 aa17.11■□□□□ 0.33
APP-208ENST00000439274 VWA3BQ502W6 1294 aa17.11■□□□□ 0.33
APP-208ENST00000439274 CENPPQ6IPU0 288 aa17.11■□□□□ 0.33
APP-208ENST00000439274 GLIS3Q8NEA6 775 aa17.11■□□□□ 0.33
APP-208ENST00000439274 CEP95Q96GE4 821 aa17.11■□□□□ 0.33
APP-208ENST00000439274 PNMA5Q96PV4 448 aa17.11■□□□□ 0.33
APP-208ENST00000439274 IFIH1Q9BYX4 1025 aaKnown RBP17.11■□□□□ 0.33
APP-208ENST00000439274 PLEKHA4Q9H4M7 779 aa17.11■□□□□ 0.33
APP-208ENST00000439274 MMRN2Q9H8L6 949 aa17.11■□□□□ 0.33
APP-208ENST00000439274 VIPAS39Q9H9C1 493 aa17.11■□□□□ 0.33
APP-208ENST00000439274 SEC63Q9UGP8 760 aaKnown RBP17.11■□□□□ 0.33
APP-208ENST00000439274 SIK3Q9Y2K2 1263 aa17.11■□□□□ 0.33
APP-208ENST00000439274 PCDHA13Q9Y5I0 950 aa17.11■□□□□ 0.33
APP-208ENST00000439274 FRMPD2Q68DX3 1309 aaPredicted RBP17.1■□□□□ 0.33
APP-208ENST00000439274 USP17L5A8MUK1 530 aa17.1■□□□□ 0.33
APP-208ENST00000439274 SLC37A4O43826 429 aa17.1■□□□□ 0.33
APP-208ENST00000439274 PRPF6O94906 941 aaKnown RBP17.1■□□□□ 0.33
APP-208ENST00000439274 EIF4A3P38919 411 aaKnown RBP17.1■□□□□ 0.33
APP-208ENST00000439274 PPP4CP60510 307 aa17.1■□□□□ 0.33
APP-208ENST00000439274 FIGNQ5HY92 759 aa17.1■□□□□ 0.33
APP-208ENST00000439274 SV2BQ7L1I2 683 aa17.1■□□□□ 0.33
APP-208ENST00000439274 CREG2Q8IUH2 290 aa17.1■□□□□ 0.33
APP-208ENST00000439274 REXO1Q8N1G1 1221 aaKnown RBP17.1■□□□□ 0.33
APP-208ENST00000439274 HDAC7Q8WUI4 952 aa17.1■□□□□ 0.33
APP-208ENST00000439274 RPGRIP1Q96KN7 1286 aa17.1■□□□□ 0.33
APP-208ENST00000439274 SELENOOQ9BVL4 669 aa17.1■□□□□ 0.33
APP-208ENST00000439274 NDST4Q9H3R1 872 aa17.1■□□□□ 0.33
APP-208ENST00000439274 POTEMA6NI47 508 aa17.1■□□□□ 0.33
APP-208ENST00000439274 MCM3P25205 808 aa17.1■□□□□ 0.33
APP-208ENST00000439274 GGCXP38435 758 aa17.1■□□□□ 0.33
APP-208ENST00000439274 KIF11P52732 1056 aa17.1■□□□□ 0.33
APP-208ENST00000439274 GSTO1P78417 241 aa17.1■□□□□ 0.33
APP-208ENST00000439274 CDK17Q00537 523 aa17.1■□□□□ 0.33
APP-208ENST00000439274 LRRC41Q15345 812 aa17.1■□□□□ 0.33
APP-208ENST00000439274 CCNI2Q6ZMN8 369 aaPredicted RBP17.1■□□□□ 0.33
APP-208ENST00000439274 CCDC155Q8N6L0 562 aa17.1■□□□□ 0.33
APP-208ENST00000439274 NUDT12Q9BQG2 462 aa17.1■□□□□ 0.33
APP-208ENST00000439274 EHD2Q9NZN4 543 aa17.1■□□□□ 0.33
APP-208ENST00000439274 SNX12Q9UMY4 172 aa17.1■□□□□ 0.33
APP-208ENST00000439274 PLAGL2Q9UPG8 496 aa17.1■□□□□ 0.33
APP-208ENST00000439274 MYO1CO00159 1063 aa17.09■□□□□ 0.33
APP-208ENST00000439274 TDP2O95551 362 aa17.09■□□□□ 0.33
APP-208ENST00000439274 CXCR5P32302 372 aa17.09■□□□□ 0.33
APP-208ENST00000439274 MATR3P43243 847 aaKnown RBP eCLIP17.09■□□□□ 0.33
APP-208ENST00000439274 LRRC31Q6UY01 552 aa17.09■□□□□ 0.33
APP-208ENST00000439274 C10orf67Q8IYJ2 551 aa17.09■□□□□ 0.33
APP-208ENST00000439274 ANKRD13CQ8N6S4 541 aa17.09■□□□□ 0.33
APP-208ENST00000439274 COA7Q96BR5 231 aa17.09■□□□□ 0.33
APP-208ENST00000439274 SH2D4AQ9H788 454 aa17.09■□□□□ 0.33
APP-208ENST00000439274 LRRC53A6NM62 1247 aa17.09■□□□□ 0.33
APP-208ENST00000439274 CALCRLQ16602 461 aa17.09■□□□□ 0.33
APP-208ENST00000439274 NFRKBQ6P4R8 1299 aa17.09■□□□□ 0.33
APP-208ENST00000439274 C16orf86Q6ZW13 317 aa17.09■□□□□ 0.33
APP-208ENST00000439274 RRAGAQ7L523 313 aa17.09■□□□□ 0.33
APP-208ENST00000439274 SRLQ86TD4 932 aa17.09■□□□□ 0.33
APP-208ENST00000439274 TEX11Q8IYF3 940 aa17.09■□□□□ 0.33
APP-208ENST00000439274 DEF6Q9H4E7 631 aa17.09■□□□□ 0.33
APP-208ENST00000439274 RRP15Q9Y3B9 282 aaKnown RBP17.09■□□□□ 0.33
APP-208ENST00000439274 TNRC6CQ9HCJ0 1690 aaKnown RBP17.09■□□□□ 0.33
APP-208ENST00000439274 NCK2O43639 380 aa17.08■□□□□ 0.33
APP-208ENST00000439274 EDIL3O43854 480 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms