RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 ZNF333Q96JL9 665 aa16.96■□□□□ 0.31
CPNE1-215ENST00000437100 RMDN3Q96TC7 470 aa16.96■□□□□ 0.31
CPNE1-215ENST00000437100 GJB4Q9NTQ9 266 aa16.96■□□□□ 0.31
CPNE1-215ENST00000437100 NRBP1Q9UHY1 535 aa16.96■□□□□ 0.31
CPNE1-215ENST00000437100 PLXNA1Q9UIW2 1896 aa16.95■□□□□ 0.3
CPNE1-215ENST00000437100 CYBAP13498 195 aa16.95■□□□□ 0.3
CPNE1-215ENST00000437100 GNA11P29992 359 aa16.95■□□□□ 0.3
CPNE1-215ENST00000437100 CYP2C19P33261 490 aa16.95■□□□□ 0.3
CPNE1-215ENST00000437100 AP3B2Q13367 1082 aa16.95■□□□□ 0.3
CPNE1-215ENST00000437100 SLC9C1Q4G0N8 1177 aa16.95■□□□□ 0.3
CPNE1-215ENST00000437100 MFSD14CQ5VZR4 134 aa16.95■□□□□ 0.3
CPNE1-215ENST00000437100 GALNT17Q6IS24 598 aa16.95■□□□□ 0.3
CPNE1-215ENST00000437100 HSCBQ8IWL3 235 aa16.95■□□□□ 0.3
CPNE1-215ENST00000437100 NSUN6Q8TEA1 469 aaKnown RBP16.95■□□□□ 0.3
CPNE1-215ENST00000437100 INTS4Q96HW7 963 aaKnown RBP16.95■□□□□ 0.3
CPNE1-215ENST00000437100 IWS1Q96ST2 819 aa16.95■□□□□ 0.3
CPNE1-215ENST00000437100 PDCD2LQ9BRP1 358 aa16.95■□□□□ 0.3
CPNE1-215ENST00000437100 C6orf50Q9HD87 102 aa16.95■□□□□ 0.3
CPNE1-215ENST00000437100 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.95■□□□□ 0.3
CPNE1-215ENST00000437100 DDX49Q9Y6V7 483 aaKnown RBP16.95■□□□□ 0.3
CPNE1-215ENST00000437100 LRRC37A2A6NM11 1700 aa16.94■□□□□ 0.3
CPNE1-215ENST00000437100 XBP1P17861 261 aa16.94■□□□□ 0.3
CPNE1-215ENST00000437100 NLRP5P59047 1200 aa16.94■□□□□ 0.3
CPNE1-215ENST00000437100 CACNB2Q08289 660 aaPredicted RBP16.94■□□□□ 0.3
CPNE1-215ENST00000437100 FCHSD1Q86WN1 690 aa16.94■□□□□ 0.3
CPNE1-215ENST00000437100 TRPV1Q8NER1 839 aa16.94■□□□□ 0.3
CPNE1-215ENST00000437100 IL31RAQ8NI17 732 aa16.94■□□□□ 0.3
CPNE1-215ENST00000437100 BICD2Q8TD16 824 aa16.94■□□□□ 0.3
CPNE1-215ENST00000437100 PCDHA4Q9UN74 947 aa16.94■□□□□ 0.3
CPNE1-215ENST00000437100 KCNJ14Q9UNX9 436 aa16.94■□□□□ 0.3
CPNE1-215ENST00000437100 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.94■□□□□ 0.3
CPNE1-215ENST00000437100 FOSP01100 380 aaPredicted RBP16.93■□□□□ 0.3
CPNE1-215ENST00000437100 ZNF865P0CJ78 1059 aaPredicted RBP16.93■□□□□ 0.3
CPNE1-215ENST00000437100 PRKAR2AP13861 404 aaKnown RBP16.93■□□□□ 0.3
CPNE1-215ENST00000437100 EIF2AK2P19525 551 aaKnown RBP16.93■□□□□ 0.3
CPNE1-215ENST00000437100 PGM5Q15124 567 aa16.93■□□□□ 0.3
CPNE1-215ENST00000437100 ARHGEF16Q5VV41 709 aa16.93■□□□□ 0.3
CPNE1-215ENST00000437100 REXO1Q8N1G1 1221 aaKnown RBP16.93■□□□□ 0.3
CPNE1-215ENST00000437100 CRYGNQ8WXF5 182 aa16.93■□□□□ 0.3
CPNE1-215ENST00000437100 TMEM260Q9NX78 707 aa16.93■□□□□ 0.3
CPNE1-215ENST00000437100 PCDHA6Q9UN73 950 aa16.93■□□□□ 0.3
CPNE1-215ENST00000437100 PCDHA8Q9Y5H6 950 aa16.93■□□□□ 0.3
CPNE1-215ENST00000437100 CENPFP49454 3210 aa16.92■□□□□ 0.3
CPNE1-215ENST00000437100 MMP1P03956 469 aa16.92■□□□□ 0.3
CPNE1-215ENST00000437100 NR3C2P08235 984 aa16.92■□□□□ 0.3
CPNE1-215ENST00000437100 GJB2P29033 226 aa16.92■□□□□ 0.3
CPNE1-215ENST00000437100 KRT40Q6A162 431 aa16.92■□□□□ 0.3
CPNE1-215ENST00000437100 MCTP2Q6DN12 878 aa16.92■□□□□ 0.3
CPNE1-215ENST00000437100 VSIG10LQ86VR7 867 aa16.92■□□□□ 0.3
CPNE1-215ENST00000437100 BLIDQ8IZY5 108 aa16.92■□□□□ 0.3
CPNE1-215ENST00000437100 RASGRP4Q8TDF6 673 aa16.92■□□□□ 0.3
CPNE1-215ENST00000437100 TNFRSF25Q93038 417 aa16.92■□□□□ 0.3
CPNE1-215ENST00000437100 ANO3Q9BYT9 981 aa16.92■□□□□ 0.3
CPNE1-215ENST00000437100 ABHD16BQ9H3Z7 469 aa16.92■□□□□ 0.3
CPNE1-215ENST00000437100 BIN2Q9UBW5 565 aaPredicted RBP16.92■□□□□ 0.3
CPNE1-215ENST00000437100 SMC3Q9UQE7 1217 aa16.92■□□□□ 0.3
CPNE1-215ENST00000437100 SPDYE3A6NKU9 549 aa16.91■□□□□ 0.3
CPNE1-215ENST00000437100 SREBF1P36956 1147 aa16.91■□□□□ 0.3
CPNE1-215ENST00000437100 UBXN2AP68543 259 aa16.91■□□□□ 0.3
CPNE1-215ENST00000437100 ACVR2BQ13705 512 aa16.91■□□□□ 0.3
CPNE1-215ENST00000437100 PCNX4Q63HM2 1172 aa16.91■□□□□ 0.3
CPNE1-215ENST00000437100 XRRA1Q6P2D8 792 aa16.91■□□□□ 0.3
CPNE1-215ENST00000437100 FAM184AQ8NB25 1140 aa16.91■□□□□ 0.3
CPNE1-215ENST00000437100 FBXO18Q8NFZ0 1043 aa16.91■□□□□ 0.3
CPNE1-215ENST00000437100 C8orf76Q96K31 380 aa16.91■□□□□ 0.3
CPNE1-215ENST00000437100 VTA1Q9NP79 307 aa16.91■□□□□ 0.3
CPNE1-215ENST00000437100 PAK6Q9NQU5 681 aaPredicted RBP16.91■□□□□ 0.3
CPNE1-215ENST00000437100 RBM47A0AV96 593 aaKnown RBP16.9■□□□□ 0.3
CPNE1-215ENST00000437100 B4DLN1 442 aa16.9■□□□□ 0.3
CPNE1-215ENST00000437100 RGS20O76081 388 aa16.9■□□□□ 0.3
CPNE1-215ENST00000437100 CCND3P30281 292 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-215ENST00000437100 MRPS9P82933 396 aaKnown RBP16.9■□□□□ 0.3
CPNE1-215ENST00000437100 PDE4DQ08499 809 aa16.9■□□□□ 0.3
CPNE1-215ENST00000437100 MTFR1Q15390 333 aa16.9■□□□□ 0.3
CPNE1-215ENST00000437100 PRAMEF19Q5SWL8 479 aa16.9■□□□□ 0.3
CPNE1-215ENST00000437100 JAKMIP3Q5VZ66 844 aa16.9■□□□□ 0.3
CPNE1-215ENST00000437100 TAPT1Q6NXT6 567 aa16.9■□□□□ 0.3
CPNE1-215ENST00000437100 FBXO16Q8IX29 292 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-215ENST00000437100 OXER1Q8TDS5 423 aa16.9■□□□□ 0.3
CPNE1-215ENST00000437100 PGBD1Q96JS3 809 aa16.9■□□□□ 0.3
CPNE1-215ENST00000437100 MPHOSPH6Q99547 160 aaKnown RBP16.9■□□□□ 0.3
CPNE1-215ENST00000437100 UNC93B1Q9H1C4 597 aa16.9■□□□□ 0.3
CPNE1-215ENST00000437100 CNPY2Q9Y2B0 182 aa16.9■□□□□ 0.3
CPNE1-215ENST00000437100 EDIL3O43854 480 aa16.89■□□□□ 0.29
CPNE1-215ENST00000437100 EIF3JO75822 258 aaKnown RBP16.89■□□□□ 0.29
CPNE1-215ENST00000437100 CCL5P13501 91 aa16.89■□□□□ 0.29
CPNE1-215ENST00000437100 CCND2P30279 289 aa16.89■□□□□ 0.29
CPNE1-215ENST00000437100 STXBP2Q15833 593 aa16.89■□□□□ 0.29
CPNE1-215ENST00000437100 INPP4AQ96PE3 977 aaPredicted RBP16.89■□□□□ 0.29
CPNE1-215ENST00000437100 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.89■□□□□ 0.296e-9■□□□□ 10.4
CPNE1-215ENST00000437100 EHMT1Q9H9B1 1298 aa16.89■□□□□ 0.29
CPNE1-215ENST00000437100 HMX1Q9NP08 348 aaPredicted RBP16.89■□□□□ 0.29
CPNE1-215ENST00000437100 KIF3AQ9Y496 699 aa16.89■□□□□ 0.29
CPNE1-215ENST00000437100 BRCA2P51587 3418 aa16.89■□□□□ 0.29
CPNE1-215ENST00000437100 MCM3APO60318 1980 aa16.88■□□□□ 0.29
CPNE1-215ENST00000437100 SEPT4O43236 478 aa16.88■□□□□ 0.29
CPNE1-215ENST00000437100 STAM2O75886 525 aa16.88■□□□□ 0.29
CPNE1-215ENST00000437100 CYP3A4P08684 503 aa16.88■□□□□ 0.29
CPNE1-215ENST00000437100 KRT2P35908 639 aa16.88■□□□□ 0.29
CPNE1-215ENST00000437100 FOSBP53539 338 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms