RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 NAV1Q8NEY1 1877 aa7.23□□□□□ -1.25
ECHDC1-208ENST00000436638 PASKQ96RG2 1323 aa7.23□□□□□ -1.25
ECHDC1-208ENST00000436638 POLR2AP24928 1970 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 EML1O00423 815 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 EPB41L2O43491 1005 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 USP2O75604 605 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 ZRANB2O95218 330 aaKnown RBP eCLIP7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 SLURP2P0DP57 97 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 CAP2P40123 477 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 CDK8P49336 464 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 HUNKP57058 714 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 C1QTNF8P60827 252 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 UBAP2LQ14157 1087 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 MAP3K11Q16584 847 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 RRP12Q5JTH9 1297 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 AKNAD1Q5T1N1 836 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 C16orf86Q6ZW13 317 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 RALYLQ86SE5 291 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 NLRP8Q86W28 1048 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 SVOPQ8N4V2 548 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 OTUD6BQ8N6M0 293 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 MAP4K1Q92918 833 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 KLRG1Q96E93 195 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 ABHD17AQ96GS6 310 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 TSPAN18Q96SJ8 248 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 KRT23Q9C075 422 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 LSG1Q9H089 658 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 GINM1Q9NU53 330 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 NOVA2Q9UNW9 492 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 PCDHGC4Q9Y5F7 938 aa7.22□□□□□ -1.25
ECHDC1-208ENST00000436638 MYH1P12882 1939 aa7.21□□□□□ -1.25
ECHDC1-208ENST00000436638 TSPY2A6NKD2 308 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 ATXN7O15265 892 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 FOXP2O15409 715 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 BNIP3LO60238 219 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 RANBP6O60518 1105 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 CTNND1O60716 968 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 GDF11O95390 407 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 ASNSP08243 561 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 TSPY3P0CV98 308 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 TSPY8P0CW00 308 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 NT5C2P49902 561 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 ZNF157P51786 506 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 MAP3K10Q02779 954 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 GABPAQ06546 454 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 KRT32Q14532 448 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 ABCB5Q2M3G0 1257 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 DEFB115Q30KQ5 88 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 CST9Q5W186 159 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 CREB3L3Q68CJ9 461 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 MOB2Q70IA6 237 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 SCYL3Q8IZE3 742 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 SLC44A5Q8NCS7 719 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 WHAMMQ8TF30 809 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 STAG1Q8WVM7 1258 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 ESR2Q92731 530 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 CNNM2Q9H8M5 875 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 AS3MTQ9HBK9 375 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 ZNF112Q9UJU3 913 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 ANAPC4Q9UJX5 808 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 PRDM4Q9UKN5 801 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 ATXN7L1Q9ULK2 861 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 FZD1Q9UP38 647 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 NUB1Q9Y5A7 615 aa7.21□□□□□ -1.26
ECHDC1-208ENST00000436638 ROBO3Q96MS0 1386 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 PAPPA2Q9BXP8 1791 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 FOCADQ5VW36 1801 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 ERICH2A1L162 156 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 DCDC2BA2VCK2 349 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 PHF20L1A8MW92 1017 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 SLC27A2O14975 620 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 KHNYNO15037 678 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 PRDM1O75626 825 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 GH2P01242 217 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 CYP21A2P08686 494 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 FGFR3P22607 806 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 INPP5BP32019 993 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 SHMT1P34896 483 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 ECE1P42892 770 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 TFAP4Q01664 338 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 GRM1Q13255 1194 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 VGLL4Q14135 290 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 RAB3GAP1Q15042 981 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 NECTIN1Q15223 517 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 C8orf34Q49A92 452 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 CCDC178Q5BJE1 867 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 NOL9Q5SY16 702 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 ZFYVE27Q5T4F4 411 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 ZNF385CQ66K41 422 aaPredicted RBP7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 RGMBQ6NW40 437 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 TATDN1Q6P1N9 297 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 LRRC69Q6ZNQ3 347 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 TMEM179Q6ZVK1 233 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 ARMCX6Q7L4S7 300 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 METTL16Q86W50 562 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 IQCA1Q86XH1 822 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 EGFL6Q8IUX8 553 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 TBC1D10CQ8IV04 446 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 NCOA7Q8NI08 942 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms