RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 NBNO60934 754 aa7.61□□□□□ -1.19
SDCBP-203ENST00000424270 SDHBP21912 280 aa7.61□□□□□ -1.19
SDCBP-203ENST00000424270 PDE4BQ07343 736 aa7.61□□□□□ -1.19
SDCBP-203ENST00000424270 G3BP1Q13283 466 aaKnown RBP eCLIP7.61□□□□□ -1.19
SDCBP-203ENST00000424270 OS9Q13438 667 aaPredicted RBP7.61□□□□□ -1.19
SDCBP-203ENST00000424270 COL19A1Q14993 1142 aa7.61□□□□□ -1.19
SDCBP-203ENST00000424270 CTC1Q2NKJ3 1217 aa7.61□□□□□ -1.19
SDCBP-203ENST00000424270 TMEM63BQ5T3F8 832 aa7.61□□□□□ -1.19
SDCBP-203ENST00000424270 RBM23Q86U06 439 aaKnown RBP7.61□□□□□ -1.19
SDCBP-203ENST00000424270 KREMEN2Q8NCW0 462 aa7.61□□□□□ -1.19
SDCBP-203ENST00000424270 REPS2Q8NFH8 660 aa7.61□□□□□ -1.19
SDCBP-203ENST00000424270 DYNLL2Q96FJ2 89 aa7.61□□□□□ -1.19
SDCBP-203ENST00000424270 IFIH1Q9BYX4 1025 aaKnown RBP7.61□□□□□ -1.19
SDCBP-203ENST00000424270 WDR11Q9BZH6 1224 aa7.61□□□□□ -1.19
SDCBP-203ENST00000424270 LMAN2LQ9H0V9 348 aa7.61□□□□□ -1.19
SDCBP-203ENST00000424270 VTA1Q9NP79 307 aa7.61□□□□□ -1.19
SDCBP-203ENST00000424270 PCDHGC5Q9Y5F6 944 aa7.61□□□□□ -1.19
SDCBP-203ENST00000424270 DDX49Q9Y6V7 483 aaKnown RBP7.61□□□□□ -1.19
SDCBP-203ENST00000424270 MYH1P12882 1939 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 KMT2BQ9UMN6 2715 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-203ENST00000424270 TANC1Q9C0D5 1861 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 MAGEB6P1A0A0J9YX57 407 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 STK25O00506 426 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 GRM6O15303 877 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 LGR5O75473 907 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 CYP2E1P05181 493 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-203ENST00000424270 CKBP12277 381 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 ZAP70P43403 619 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 NRIP1P48552 1158 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 ADAM15Q13444 863 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 CBX2Q14781 532 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-203ENST00000424270 PPP2R5BQ15173 497 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 ANGPT1Q15389 498 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 DUSP28Q4G0W2 176 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 UBALD2Q8IYN6 164 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 C7orf31Q8N865 590 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 SMRP1Q8NCR6 262 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 CCDC17Q96LX7 622 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 FGD4Q96M96 766 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 SEMA4AQ9H3S1 761 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 KANSL2Q9H9L4 492 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 PIH1D3Q9NQM4 214 aaKnown RBP7.6□□□□□ -1.19
SDCBP-203ENST00000424270 RNF146Q9NTX7 359 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 CDV3Q9UKY7 258 aaKnown RBP7.6□□□□□ -1.19
SDCBP-203ENST00000424270 BARX2Q9UMQ3 279 aaPredicted RBP7.6□□□□□ -1.19
SDCBP-203ENST00000424270 RWDD3Q9Y3V2 267 aa7.6□□□□□ -1.19
SDCBP-203ENST00000424270 FOCADQ5VW36 1801 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 EMSYQ7Z589 1322 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 EYA4O95677 639 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 CXCL10P02778 98 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 SRGAP2BP0DMP2 458 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 CYP2D6P10635 497 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 ALAS1P13196 640 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 HTRA4P83105 476 aaPredicted RBP7.59□□□□□ -1.19
SDCBP-203ENST00000424270 COL9A3Q14050 684 aaPredicted RBP7.59□□□□□ -1.19
SDCBP-203ENST00000424270 TCTN1Q2MV58 587 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 TAPT1Q6NXT6 567 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 ZC3H14Q6PJT7 736 aaKnown RBP7.59□□□□□ -1.19
SDCBP-203ENST00000424270 NSMFQ6X4W1 530 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 MICAL1Q8TDZ2 1067 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 RUBCNQ92622 972 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 IL17RAQ96F46 866 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 DDRGK1Q96HY6 314 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 MPHOSPH6Q99547 160 aaKnown RBP7.59□□□□□ -1.19
SDCBP-203ENST00000424270 DLL3Q9NYJ7 618 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 SORCS3Q9UPU3 1222 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 R4GN57 208 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 PKD1L2Q7Z442 2459 aa7.59□□□□□ -1.19
SDCBP-203ENST00000424270 FAM186AA6NE01 2351 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 ATP2A1O14983 1001 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 RB1P06400 928 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 GABPAQ06546 454 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 COASYQ13057 564 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 GDF6Q6KF10 455 aaPredicted RBP7.58□□□□□ -1.2
SDCBP-203ENST00000424270 SIAH1Q8IUQ4 282 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 WDR63Q8IWG1 891 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 DHX37Q8IY37 1157 aaKnown RBP7.58□□□□□ -1.2
SDCBP-203ENST00000424270 DBF4BQ8NFT6 615 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 SDR42E1Q8WUS8 393 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 SEPT8Q92599 483 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 MSLNLQ96KJ4 702 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 TRERF1Q96PN7 1200 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 APOL5Q9BWW9 433 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 A1CFQ9NQ94 594 aaKnown RBP7.58□□□□□ -1.2
SDCBP-203ENST00000424270 NCDNQ9UBB6 729 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 NR2E1Q9Y466 385 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 NCOR2Q9Y618 2525 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 RIF1Q5UIP0 2472 aaKnown RBP7.58□□□□□ -1.2
SDCBP-203ENST00000424270 PTPRSQ13332 1948 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 ZFHX4Q86UP3 3567 aa7.58□□□□□ -1.2
SDCBP-203ENST00000424270 F5H6K3 240 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 IGSF3O75054 1194 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 MMP1P03956 469 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 BMPR1AP36894 532 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 THPOP40225 353 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 CLCN5P51795 746 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 OAZ1P54368 228 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 KLRC3Q07444 240 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 PDE4DQ08499 809 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 DDX10Q13206 875 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms