RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 CMTR1Q8N1G2 835 aaKnown RBP20.68■□□□□ 0.9
SBDSP1-202ENST00000423945 NSUN6Q8TEA1 469 aaKnown RBP20.68■□□□□ 0.9
SBDSP1-202ENST00000423945 COPS5Q92905 334 aa20.68■□□□□ 0.9
SBDSP1-202ENST00000423945 SZT2Q5T011 3432 aa20.68■□□□□ 0.9
SBDSP1-202ENST00000423945 ELP1O95163 1332 aa20.68■□□□□ 0.9
SBDSP1-202ENST00000423945 A0A1W2PPC1 479 aa20.67■□□□□ 0.9
SBDSP1-202ENST00000423945 EIF2AK2P19525 551 aaKnown RBP20.67■□□□□ 0.9
SBDSP1-202ENST00000423945 ITGB8P26012 769 aa20.67■□□□□ 0.9
SBDSP1-202ENST00000423945 SMARCA1P28370 1054 aa20.67■□□□□ 0.9
SBDSP1-202ENST00000423945 HOXA13P31271 388 aaPredicted RBP20.67■□□□□ 0.9
SBDSP1-202ENST00000423945 KIF5BP33176 963 aa20.67■□□□□ 0.9
SBDSP1-202ENST00000423945 CXCL17Q6UXB2 119 aa20.67■□□□□ 0.9
SBDSP1-202ENST00000423945 ANKRD33Q7Z3H0 272 aa20.67■□□□□ 0.9
SBDSP1-202ENST00000423945 GLT1D1Q96MS3 346 aa20.67■□□□□ 0.9
SBDSP1-202ENST00000423945 AP5M1Q9H0R1 490 aa20.67■□□□□ 0.9
SBDSP1-202ENST00000423945 PXMP2Q9NR77 195 aa20.67■□□□□ 0.9
SBDSP1-202ENST00000423945 BRPF3Q9ULD4 1205 aa20.67■□□□□ 0.9
SBDSP1-202ENST00000423945 SNX14Q9Y5W7 946 aa20.67■□□□□ 0.9
SBDSP1-202ENST00000423945 PQBP1O60828 265 aaKnown RBP20.66■□□□□ 0.9
SBDSP1-202ENST00000423945 CPA1P15085 419 aa20.66■□□□□ 0.9
SBDSP1-202ENST00000423945 FAAP100Q0VG06 881 aa20.66■□□□□ 0.9
SBDSP1-202ENST00000423945 CCDC62Q6P9F0 684 aa20.66■□□□□ 0.9
SBDSP1-202ENST00000423945 APOA5Q6Q788 366 aa20.66■□□□□ 0.9
SBDSP1-202ENST00000423945 SCFD2Q8WU76 684 aa20.66■□□□□ 0.9
SBDSP1-202ENST00000423945 IWS1Q96ST2 819 aa20.66■□□□□ 0.9
SBDSP1-202ENST00000423945 MPHOSPH6Q99547 160 aaKnown RBP20.66■□□□□ 0.9
SBDSP1-202ENST00000423945 PRDM5Q9NQX1 630 aaPredicted RBP20.66■□□□□ 0.9
SBDSP1-202ENST00000423945 MAP3K20Q9NYL2 800 aaKnown RBP20.66■□□□□ 0.9
SBDSP1-202ENST00000423945 SLC12A7Q9Y666 1083 aa20.66■□□□□ 0.9
SBDSP1-202ENST00000423945 GRIN2DO15399 1336 aa20.66■□□□□ 0.9
SBDSP1-202ENST00000423945 A0A0U1RQG5 324 aaPredicted RBP20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 NR3C2P08235 984 aa20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 CLTBP09497 229 aa20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 CALM1P0DP23 149 aa20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 CALM2P0DP24 149 aa20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 CALM3P0DP25 149 aa20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 KRT32Q14532 448 aa20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 ARHGEF16Q5VV41 709 aa20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 TMTC3Q6ZXV5 915 aa20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 MICU3Q86XE3 530 aa20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 SAMD3Q8N6K7 520 aa20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 FANCBQ8NB91 859 aa20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 SLC43A3Q8NBI5 491 aa20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 IL31RAQ8NI17 732 aa20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 TOX2Q96NM4 488 aa20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 LZTS2Q9BRK4 669 aa20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 PDCD2LQ9BRP1 358 aa20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 UBE2OQ9C0C9 1292 aaKnown RBP20.65■□□□□ 0.9
SBDSP1-202ENST00000423945 B4DLN1 442 aa20.64■□□□□ 0.89
SBDSP1-202ENST00000423945 ARVCFO00192 962 aa20.64■□□□□ 0.89
SBDSP1-202ENST00000423945 SOX1O00570 391 aaPredicted RBP20.64■□□□□ 0.89
SBDSP1-202ENST00000423945 RGS20O76081 388 aa20.64■□□□□ 0.89
SBDSP1-202ENST00000423945 CENPBP07199 599 aaPredicted RBP20.64■□□□□ 0.89
SBDSP1-202ENST00000423945 GNAQP50148 359 aa20.64■□□□□ 0.89
SBDSP1-202ENST00000423945 MRPL12P52815 198 aaKnown RBP20.64■□□□□ 0.89
SBDSP1-202ENST00000423945 PPP2R5BQ15173 497 aa20.64■□□□□ 0.89
SBDSP1-202ENST00000423945 STXBP2Q15833 593 aa20.64■□□□□ 0.89
SBDSP1-202ENST00000423945 RRP36Q96EU6 259 aaKnown RBP20.64■□□□□ 0.89
SBDSP1-202ENST00000423945 SCN10AQ9Y5Y9 1956 aa20.63■□□□□ 0.89
SBDSP1-202ENST00000423945 hCG_1642624A0A1W2PR95 340 aa20.63■□□□□ 0.89
SBDSP1-202ENST00000423945 GCOM1H8Y6P7 765 aaPredicted RBP20.63■□□□□ 0.89
SBDSP1-202ENST00000423945 KIAA0355O15063 1070 aa20.63■□□□□ 0.89
SBDSP1-202ENST00000423945 NKRFO15226 690 aaKnown RBP eCLIP20.63■□□□□ 0.89
SBDSP1-202ENST00000423945 POLR2MP0CAP2 368 aa20.63■□□□□ 0.89
SBDSP1-202ENST00000423945 TXNP10599 105 aaKnown RBP20.63■□□□□ 0.89
SBDSP1-202ENST00000423945 TRAF1Q13077 416 aa20.63■□□□□ 0.89
SBDSP1-202ENST00000423945 PGM5Q15124 567 aa20.63■□□□□ 0.89
SBDSP1-202ENST00000423945 SEPT14Q6ZU15 432 aa20.63■□□□□ 0.89
SBDSP1-202ENST00000423945 OR6J1Q8NGC5 347 aa20.63■□□□□ 0.89
SBDSP1-202ENST00000423945 BADQ92934 168 aa20.63■□□□□ 0.89
SBDSP1-202ENST00000423945 PRKAG2Q9UGJ0 569 aa20.63■□□□□ 0.89
SBDSP1-202ENST00000423945 MYH7BA7E2Y1 1941 aa20.63■□□□□ 0.89
SBDSP1-202ENST00000423945 CABYRO75952 493 aa20.62■□□□□ 0.89
SBDSP1-202ENST00000423945 PSMC6P62333 389 aa20.62■□□□□ 0.89
SBDSP1-202ENST00000423945 FUT2Q10981 343 aa20.62■□□□□ 0.89
SBDSP1-202ENST00000423945 TTLL4Q14679 1199 aa20.62■□□□□ 0.89
SBDSP1-202ENST00000423945 LY6KQ17RY6 165 aa20.62■□□□□ 0.89
SBDSP1-202ENST00000423945 FAM126BQ8IXS8 530 aa20.62■□□□□ 0.89
SBDSP1-202ENST00000423945 TDHQ8IZJ6 230 aa20.62■□□□□ 0.89
SBDSP1-202ENST00000423945 CCDC82Q8N4S0 544 aa20.62■□□□□ 0.89
SBDSP1-202ENST00000423945 VTI1AQ96AJ9 217 aa20.62■□□□□ 0.89
SBDSP1-202ENST00000423945 JAKMIP1Q96N16 626 aaKnown RBP20.62■□□□□ 0.89
SBDSP1-202ENST00000423945 FAM217BQ9NTX9 383 aaPredicted RBP20.62■□□□□ 0.89
SBDSP1-202ENST00000423945 TBX21Q9UL17 535 aa20.62■□□□□ 0.89
SBDSP1-202ENST00000423945 FRMPD4Q14CM0 1322 aa20.61■□□□□ 0.89
SBDSP1-202ENST00000423945 CNTNAP5Q8WYK1 1306 aa20.61■□□□□ 0.89
SBDSP1-202ENST00000423945 ZEB2O60315 1214 aa20.61■□□□□ 0.89
SBDSP1-202ENST00000423945 EIF3JO75822 258 aaKnown RBP20.61■□□□□ 0.89
SBDSP1-202ENST00000423945 REC8O95072 547 aa20.61■□□□□ 0.89
SBDSP1-202ENST00000423945 HMGB1P09429 215 aaKnown RBP20.61■□□□□ 0.89
SBDSP1-202ENST00000423945 PURAQ00577 322 aaKnown RBP20.61■□□□□ 0.89
SBDSP1-202ENST00000423945 ARHGAP1Q07960 439 aa20.61■□□□□ 0.89
SBDSP1-202ENST00000423945 ITGA7Q13683 1181 aa20.61■□□□□ 0.89
SBDSP1-202ENST00000423945 VSIG10LQ86VR7 867 aa20.61■□□□□ 0.89
SBDSP1-202ENST00000423945 FCHSD1Q86WN1 690 aa20.61■□□□□ 0.89
SBDSP1-202ENST00000423945 ZFP91Q96JP5 570 aaPredicted RBP20.61■□□□□ 0.89
SBDSP1-202ENST00000423945 LBHD1Q9BQE6 289 aaPredicted RBP20.61■□□□□ 0.89
SBDSP1-202ENST00000423945 LAMA2P24043 3122 aaKnown RBP20.6■□□□□ 0.89
SBDSP1-202ENST00000423945 KLF18A0A0U1RQI7 1052 aa20.6■□□□□ 0.89
SBDSP1-202ENST00000423945 A6NJR5 290 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms