RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 KLHDC7AQ5VTJ3 777 aa18.4■□□□□ 0.54
PKP4-204ENST00000421462 CNTNAP5Q8WYK1 1306 aa18.4■□□□□ 0.54
PKP4-204ENST00000421462 CCNE1P24864 410 aa18.39■□□□□ 0.54
PKP4-204ENST00000421462 ELF1P32519 619 aa18.39■□□□□ 0.54
PKP4-204ENST00000421462 QPCTQ16769 361 aa18.39■□□□□ 0.54
PKP4-204ENST00000421462 CYFIP2Q96F07 1278 aa18.39■□□□□ 0.54
PKP4-204ENST00000421462 VCPKMTQ9H867 229 aa18.39■□□□□ 0.54
PKP4-204ENST00000421462 SLC24A3Q9HC58 644 aa18.39■□□□□ 0.54
PKP4-204ENST00000421462 CHD4Q14839 1912 aa18.39■□□□□ 0.53
PKP4-204ENST00000421462 USP54Q70EL1 1684 aa18.39■□□□□ 0.53
PKP4-204ENST00000421462 BLIDQ8IZY5 108 aa18.39■□□□□ 0.53
PKP4-204ENST00000421462 UBLCP1Q8WVY7 318 aaPredicted RBP18.39■□□□□ 0.53
PKP4-204ENST00000421462 CAVIN3Q969G5 261 aa18.39■□□□□ 0.53
PKP4-204ENST00000421462 CCDC47Q96A33 483 aaKnown RBP18.39■□□□□ 0.53
PKP4-204ENST00000421462 PYM1Q9BRP8 204 aaKnown RBP18.39■□□□□ 0.53
PKP4-204ENST00000421462 PLAGL2Q9UPG8 496 aa18.39■□□□□ 0.53
PKP4-204ENST00000421462 PPP1R12BO60237 982 aaPredicted RBP18.38■□□□□ 0.53
PKP4-204ENST00000421462 CHRM1P11229 460 aaPredicted RBP18.38■□□□□ 0.53
PKP4-204ENST00000421462 PDE6BP35913 854 aa18.38■□□□□ 0.53
PKP4-204ENST00000421462 PIK3R5Q8WYR1 880 aa18.38■□□□□ 0.53
PKP4-204ENST00000421462 PKD1L3Q7Z443 1732 aa18.38■□□□□ 0.53
PKP4-204ENST00000421462 LRRC41Q15345 812 aa18.38■□□□□ 0.53
PKP4-204ENST00000421462 GIGYF2Q6Y7W6 1299 aaKnown RBP18.38■□□□□ 0.53
PKP4-204ENST00000421462 HEATR3Q7Z4Q2 680 aa18.38■□□□□ 0.53
PKP4-204ENST00000421462 RETREG2Q8NC44 543 aa18.38■□□□□ 0.53
PKP4-204ENST00000421462 ZNF512BQ96KM6 892 aaPredicted RBP18.38■□□□□ 0.53
PKP4-204ENST00000421462 CPVLQ9H3G5 476 aa18.38■□□□□ 0.53
PKP4-204ENST00000421462 NDST4Q9H3R1 872 aa18.38■□□□□ 0.53
PKP4-204ENST00000421462 RBM28Q9NW13 759 aaKnown RBP18.38■□□□□ 0.53
PKP4-204ENST00000421462 JAG2Q9Y219 1238 aa18.38■□□□□ 0.53
PKP4-204ENST00000421462 TMEM94Q12767 1356 aa18.38■□□□□ 0.53
PKP4-204ENST00000421462 RAD51CO43502 376 aa18.38■□□□□ 0.53
PKP4-204ENST00000421462 RHOBTB3O94955 611 aa18.38■□□□□ 0.53
PKP4-204ENST00000421462 UIMC1Q96RL1 719 aa18.38■□□□□ 0.53
PKP4-204ENST00000421462 KIF13AQ9H1H9 1805 aa18.37■□□□□ 0.53
PKP4-204ENST00000421462 GYG1P46976 350 aa18.37■□□□□ 0.53
PKP4-204ENST00000421462 PPP2R5AQ15172 486 aa18.37■□□□□ 0.53
PKP4-204ENST00000421462 LETM2Q2VYF4 491 aa18.37■□□□□ 0.53
PKP4-204ENST00000421462 FAM114A1Q8IWE2 563 aa18.37■□□□□ 0.53
PKP4-204ENST00000421462 AP1M1Q9BXS5 423 aa18.37■□□□□ 0.53
PKP4-204ENST00000421462 VEZTQ9HBM0 779 aa18.37■□□□□ 0.53
PKP4-204ENST00000421462 BICDL2A1A5D9 508 aa18.37■□□□□ 0.53
PKP4-204ENST00000421462 FAM107AO95990 144 aa18.37■□□□□ 0.53
PKP4-204ENST00000421462 CTNNA1P35221 906 aaKnown RBP18.37■□□□□ 0.53
PKP4-204ENST00000421462 SNCBQ16143 134 aa18.37■□□□□ 0.53
PKP4-204ENST00000421462 CABP7Q86V35 215 aa18.37■□□□□ 0.53
PKP4-204ENST00000421462 DHTKD1Q96HY7 919 aaPredicted RBP18.37■□□□□ 0.53
PKP4-204ENST00000421462 TMOD3Q9NYL9 352 aa18.37■□□□□ 0.53
PKP4-204ENST00000421462 BCL9LQ86UU0 1499 aa18.37■□□□□ 0.53
PKP4-204ENST00000421462 PHF20L1A8MW92 1017 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 GCOM1H8Y6P7 765 aaPredicted RBP18.36■□□□□ 0.53
PKP4-204ENST00000421462 DNM1LO00429 736 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 SKAP2O75563 359 aaPredicted RBP18.36■□□□□ 0.53
PKP4-204ENST00000421462 NEBLO76041 1014 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 MYZAPP0CAP1 466 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 TECP42680 631 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 MMP14P50281 582 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 TXNRD1Q16881 649 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 PLA2G12BQ9BX93 195 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 TSPY2A6NKD2 308 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 CYP2D6P10635 497 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 SMTNP53814 917 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 VWA3BQ502W6 1294 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 ZNF662Q6ZS27 426 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 RPAINQ86UA6 219 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 STAG2Q8N3U4 1231 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 TRIM31Q9BZY9 425 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 SEMA6BQ9H3T3 888 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 DDX20Q9UHI6 824 aaKnown RBP18.36■□□□□ 0.53
PKP4-204ENST00000421462 PDE8AO60658 829 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 PAX7P23759 505 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 CLNS1AP54105 237 aaKnown RBP18.36■□□□□ 0.53
PKP4-204ENST00000421462 ITGB3BPQ13352 177 aaPredicted RBP18.36■□□□□ 0.53
PKP4-204ENST00000421462 CHADLQ6NUI6 762 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 CYB5D1Q6P9G0 228 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 CPLX4Q7Z7G2 160 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 PARP9Q8IXQ6 854 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 C4orf32Q8N8J7 132 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 OSBPL7Q9BZF2 842 aa18.36■□□□□ 0.53
PKP4-204ENST00000421462 NOVA2Q9UNW9 492 aaKnown RBP18.36■□□□□ 0.53
PKP4-204ENST00000421462 KCNK3O14649 394 aa18.35■□□□□ 0.53
PKP4-204ENST00000421462 NAA25Q14CX7 972 aa18.35■□□□□ 0.53
PKP4-204ENST00000421462 PACSIN1Q9BY11 444 aa18.35■□□□□ 0.53
PKP4-204ENST00000421462 TCP11L1Q9NUJ3 509 aa18.35■□□□□ 0.53
PKP4-204ENST00000421462 BAIAP2L1Q9UHR4 511 aa18.35■□□□□ 0.53
PKP4-204ENST00000421462 KIF1AQ12756 1690 aa18.35■□□□□ 0.53
PKP4-204ENST00000421462 SMIM23A6NLE4 172 aa18.35■□□□□ 0.53
PKP4-204ENST00000421462 DCDC2CA8MYV0 355 aa18.35■□□□□ 0.53
PKP4-204ENST00000421462 KLRC1P26715 233 aa18.35■□□□□ 0.53
PKP4-204ENST00000421462 SPATS2Q86XZ4 545 aaKnown RBP18.35■□□□□ 0.53
PKP4-204ENST00000421462 TRIM9Q9C026 710 aa18.35■□□□□ 0.53
PKP4-204ENST00000421462 NID2Q14112 1375 aa18.35■□□□□ 0.53
PKP4-204ENST00000421462 A6NNZ2 444 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 FGFR2P21802 821 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 KCNB1Q14721 858 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 PPP2R5BQ15173 497 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 TUBB8Q3ZCM7 444 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 TBC1D5Q92609 795 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 ERGIC2Q96RQ1 377 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 GDF3Q9NR23 364 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms