RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 IL27Q8NEV9 243 aa19.8■□□□□ 0.76
UPF3AP3-201ENST00000420996 CHD7Q9P2D1 2997 aa19.8■□□□□ 0.76
UPF3AP3-201ENST00000420996 TXNP10599 105 aaKnown RBP19.79■□□□□ 0.76
UPF3AP3-201ENST00000420996 NMIQ13287 307 aaPredicted RBP19.79■□□□□ 0.76
UPF3AP3-201ENST00000420996 GPATCH4Q5T3I0 446 aaKnown RBP19.79■□□□□ 0.76
UPF3AP3-201ENST00000420996 ZNF589Q86UQ0 364 aaPredicted RBP19.79■□□□□ 0.76
UPF3AP3-201ENST00000420996 PHOSPHO2Q8TCD6 241 aa19.79■□□□□ 0.76
UPF3AP3-201ENST00000420996 COPS5Q92905 334 aa19.79■□□□□ 0.76
UPF3AP3-201ENST00000420996 SLC9A7Q96T83 725 aa19.79■□□□□ 0.76
UPF3AP3-201ENST00000420996 UHRF1Q96T88 793 aaPredicted RBP19.79■□□□□ 0.76
UPF3AP3-201ENST00000420996 TANC1Q9C0D5 1861 aa19.79■□□□□ 0.76
UPF3AP3-201ENST00000420996 CCDC171Q6TFL3 1326 aa19.78■□□□□ 0.76
UPF3AP3-201ENST00000420996 IQCF3P0C7M6 154 aa19.78■□□□□ 0.76
UPF3AP3-201ENST00000420996 POU3F3P20264 500 aaPredicted RBP19.78■□□□□ 0.76
UPF3AP3-201ENST00000420996 BFSP2Q13515 415 aa19.78■□□□□ 0.76
UPF3AP3-201ENST00000420996 MAF1Q9H063 256 aa19.78■□□□□ 0.76
UPF3AP3-201ENST00000420996 RNF41Q9H4P4 317 aaPredicted RBP19.78■□□□□ 0.76
UPF3AP3-201ENST00000420996 MUC3AQ02505 3323 aa19.78■□□□□ 0.76
UPF3AP3-201ENST00000420996 TRIP12Q14669 1992 aaPredicted RBP19.77■□□□□ 0.76
UPF3AP3-201ENST00000420996 CA3P07451 260 aa19.77■□□□□ 0.76
UPF3AP3-201ENST00000420996 COL9A1P20849 921 aa19.77■□□□□ 0.76
UPF3AP3-201ENST00000420996 HDAC1Q13547 482 aaPredicted RBP19.77■□□□□ 0.76
UPF3AP3-201ENST00000420996 DGKHQ86XP1 1220 aa19.77■□□□□ 0.76
UPF3AP3-201ENST00000420996 TBC1D10CQ8IV04 446 aa19.77■□□□□ 0.76
UPF3AP3-201ENST00000420996 MICALL1Q8N3F8 863 aa19.77■□□□□ 0.76
UPF3AP3-201ENST00000420996 PPP1R13LQ8WUF5 828 aa19.77■□□□□ 0.76
UPF3AP3-201ENST00000420996 ESR2Q92731 530 aa19.77■□□□□ 0.76
UPF3AP3-201ENST00000420996 TCF20Q9UGU0 1960 aaKnown RBP19.76■□□□□ 0.75
UPF3AP3-201ENST00000420996 ARIH2O95376 493 aa19.76■□□□□ 0.75
UPF3AP3-201ENST00000420996 GOLGA8HP0CJ92 632 aa19.76■□□□□ 0.75
UPF3AP3-201ENST00000420996 MFAP1P55081 439 aaKnown RBP19.76■□□□□ 0.75
UPF3AP3-201ENST00000420996 RRP1P56182 461 aaKnown RBP19.76■□□□□ 0.75
UPF3AP3-201ENST00000420996 USH1GQ495M9 461 aa19.76■□□□□ 0.75
UPF3AP3-201ENST00000420996 CCDC62Q6P9F0 684 aa19.76■□□□□ 0.75
UPF3AP3-201ENST00000420996 FTOQ9C0B1 505 aaKnown RBP eCLIP19.76■□□□□ 0.75
UPF3AP3-201ENST00000420996 NOD1Q9Y239 953 aa19.76■□□□□ 0.75
UPF3AP3-201ENST00000420996 KIAA1217Q5T5P2 1943 aa19.76■□□□□ 0.75
UPF3AP3-201ENST00000420996 TET1Q8NFU7 2136 aa19.75■□□□□ 0.75
UPF3AP3-201ENST00000420996 TRIM6-TRIM34B2RNG4 842 aa19.75■□□□□ 0.75
UPF3AP3-201ENST00000420996 RFXAPO00287 272 aa19.75■□□□□ 0.75
UPF3AP3-201ENST00000420996 GTPBP6O43824 516 aaPredicted RBP19.75■□□□□ 0.75
UPF3AP3-201ENST00000420996 BMP1P13497 986 aa19.75■□□□□ 0.75
UPF3AP3-201ENST00000420996 NT5C2P49902 561 aa19.75■□□□□ 0.75
UPF3AP3-201ENST00000420996 AAK1Q2M2I8 961 aa19.75■□□□□ 0.75
UPF3AP3-201ENST00000420996 ZKSCAN3Q9BRR0 538 aa19.75■□□□□ 0.75
UPF3AP3-201ENST00000420996 UBA5Q9GZZ9 404 aa19.75■□□□□ 0.75
UPF3AP3-201ENST00000420996 MTCH2Q9Y6C9 303 aa19.75■□□□□ 0.75
UPF3AP3-201ENST00000420996 KIF28PB7ZC32 967 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 BAIAP3O94812 1187 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 TAP1Q03518 808 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 PTGISQ16647 500 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 CCDC178Q5BJE1 867 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 HERC6Q8IVU3 1022 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 CCDC155Q8N6L0 562 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 CAGE1Q8TC20 777 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 NSUN6Q8TEA1 469 aaKnown RBP19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 AFG1LQ8WV93 481 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 TBC1D5Q92609 795 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 RILPL2Q969X0 211 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 CRBNQ96SW2 442 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 CPVLQ9H3G5 476 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 CERS4Q9HA82 394 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 MYH6P13533 1939 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 ABCB11O95342 1321 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 NEDD4P46934 1319 aa19.74■□□□□ 0.75
UPF3AP3-201ENST00000420996 ZNF213O14771 459 aa19.73■□□□□ 0.75
UPF3AP3-201ENST00000420996 GH1P01241 217 aa19.73■□□□□ 0.75
UPF3AP3-201ENST00000420996 MMP3P08254 477 aa19.73■□□□□ 0.75
UPF3AP3-201ENST00000420996 CHMP4BP1P59074 171 aa19.73■□□□□ 0.75
UPF3AP3-201ENST00000420996 TFF2Q03403 129 aa19.73■□□□□ 0.75
UPF3AP3-201ENST00000420996 SKIV2LQ15477 1246 aaKnown RBP19.73■□□□□ 0.75
UPF3AP3-201ENST00000420996 CDC37Q16543 378 aaPredicted RBP19.73■□□□□ 0.75
UPF3AP3-201ENST00000420996 SESTD1Q86VW0 696 aa19.73■□□□□ 0.75
UPF3AP3-201ENST00000420996 IQCA1Q86XH1 822 aa19.73■□□□□ 0.75
UPF3AP3-201ENST00000420996 PNMA1Q8ND90 353 aa19.73■□□□□ 0.75
UPF3AP3-201ENST00000420996 SYTL5Q8TDW5 730 aaPredicted RBP19.73■□□□□ 0.75
UPF3AP3-201ENST00000420996 AFAP1L1Q8TED9 768 aa19.73■□□□□ 0.75
UPF3AP3-201ENST00000420996 ANKS1AQ92625 1134 aa19.73■□□□□ 0.75
UPF3AP3-201ENST00000420996 TAAR1Q96RJ0 339 aa19.73■□□□□ 0.75
UPF3AP3-201ENST00000420996 IWS1Q96ST2 819 aa19.73■□□□□ 0.75
UPF3AP3-201ENST00000420996 PRRC2BQ5JSZ5 2229 aaKnown RBP19.73■□□□□ 0.75
UPF3AP3-201ENST00000420996 LAMA4Q16363 1823 aa19.72■□□□□ 0.75
UPF3AP3-201ENST00000420996 NCOR1O75376 2440 aa19.72■□□□□ 0.75
UPF3AP3-201ENST00000420996 EPOPA6NHQ4 379 aa19.72■□□□□ 0.75
UPF3AP3-201ENST00000420996 SDSP20132 328 aa19.72■□□□□ 0.75
UPF3AP3-201ENST00000420996 ARHGAP1Q07960 439 aa19.72■□□□□ 0.75
UPF3AP3-201ENST00000420996 STXBP2Q15833 593 aa19.72■□□□□ 0.75
UPF3AP3-201ENST00000420996 LY6KQ17RY6 165 aa19.72■□□□□ 0.75
UPF3AP3-201ENST00000420996 GDF6Q6KF10 455 aaPredicted RBP19.72■□□□□ 0.75
UPF3AP3-201ENST00000420996 SEPT14Q6ZU15 432 aa19.72■□□□□ 0.75
UPF3AP3-201ENST00000420996 MCF2L2Q86YR7 1114 aa19.72■□□□□ 0.75
UPF3AP3-201ENST00000420996 ADGRF4Q8IZF3 695 aa19.72■□□□□ 0.75
UPF3AP3-201ENST00000420996 CTAGE1Q96RT6 745 aa19.72■□□□□ 0.75
UPF3AP3-201ENST00000420996 LNPKQ9C0E8 428 aa19.72■□□□□ 0.75
UPF3AP3-201ENST00000420996 COL20A1Q9P218 1284 aa19.72■□□□□ 0.75
UPF3AP3-201ENST00000420996 REV3LO60673 3130 aa19.72■□□□□ 0.75
UPF3AP3-201ENST00000420996 PTPRSQ13332 1948 aa19.72■□□□□ 0.75
UPF3AP3-201ENST00000420996 KDM4AO75164 1064 aa19.71■□□□□ 0.75
UPF3AP3-201ENST00000420996 CASTP20810 708 aaKnown RBP19.71■□□□□ 0.75
UPF3AP3-201ENST00000420996 ARNTL2Q8WYA1 636 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms