RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TMEM151BQ8IW70 566 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 PLEKHO2Q8TD55 490 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 USP33Q8TEY7 942 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 PEX11GQ96HA9 241 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 NBPF4Q96M43 638 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 TANGO6Q9C0B7 1094 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 DBR1Q9UK59 544 aaKnown RBP5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 NUDT5Q9UKK9 219 aa5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 TIMM13Q9Y5L4 95 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P23-201ENST00000414981 FUCA1P04066 466 aa5.68□□□□□ -1.5
HMGB3P23-201ENST00000414981 PFKLP17858 780 aa5.68□□□□□ -1.5
HMGB3P23-201ENST00000414981 ECI1P42126 302 aa5.68□□□□□ -1.5
HMGB3P23-201ENST00000414981 PPP2R2AP63151 447 aa5.68□□□□□ -1.5
HMGB3P23-201ENST00000414981 HSP90AA2PQ14568 343 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P23-201ENST00000414981 INF2Q27J81 1249 aa5.68□□□□□ -1.5
HMGB3P23-201ENST00000414981 FBLN7Q53RD9 439 aa5.68□□□□□ -1.5
HMGB3P23-201ENST00000414981 MBLAC2Q68D91 279 aa5.68□□□□□ -1.5
HMGB3P23-201ENST00000414981 TMEFF1Q8IYR6 380 aa5.68□□□□□ -1.5
HMGB3P23-201ENST00000414981 DIO2Q92813 273 aa5.68□□□□□ -1.5
HMGB3P23-201ENST00000414981 TSPAN17Q96FV3 270 aa5.68□□□□□ -1.5
HMGB3P23-201ENST00000414981 HIRIP3Q9BW71 556 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P23-201ENST00000414981 TRIM55Q9BYV6 548 aa5.68□□□□□ -1.5
HMGB3P23-201ENST00000414981 RNF38Q9H0F5 515 aa5.68□□□□□ -1.5
HMGB3P23-201ENST00000414981 IRF2BPLQ9H1B7 796 aa5.68□□□□□ -1.5
HMGB3P23-201ENST00000414981 MSRB2Q9Y3D2 182 aa5.68□□□□□ -1.5
HMGB3P23-201ENST00000414981 MEFVO15553 781 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 BUB1BO60566 1050 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 NCAM1P13591 858 aa5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 FBLN1P23142 703 aa5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 IGFBP6P24592 240 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 LTBRP36941 435 aa5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 KCNJ6P48051 423 aa5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 RPL11P62913 178 aaKnown RBP5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 CAP1Q01518 475 aa5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 MAP4K2Q12851 820 aa5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 KCNAB2Q13303 367 aa5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 SSPNQ14714 243 aa5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 SF1Q15637 639 aaKnown RBP5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 SLC35F1Q5T1Q4 408 aa5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 LCNL1Q6ZST4 164 aa5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 KCTD13Q8WZ19 329 aa5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 DACT3Q96B18 629 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 CCDC113Q9H0I3 377 aa5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 EPB41L4AQ9HCS5 686 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 FBLN5Q9UBX5 448 aa5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 PPP1R1BQ9UD71 204 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 TMEFF2Q9UIK5 374 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 NPFFR2Q9Y5X5 522 aa5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 X6R8D5 127 aa5.67□□□□□ -1.5
HMGB3P23-201ENST00000414981 U2SURPO15042 1029 aaKnown RBP5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 MYO1BO43795 1136 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 NTRK1P04629 796 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 GRIA2P42262 883 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 ZNF200P98182 395 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 TCERG1LQ5VWI1 586 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 WWC2Q6AWC2 1192 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 DENND5AQ6IQ26 1287 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 SPOCD1Q6ZMY3 1216 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 FAM129CQ86XR2 697 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 RIOX2Q8IUF8 465 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 CCDC103Q8IW40 242 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 Q8N1Y9 231 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 NLGN1Q8N2Q7 840 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 TMEM145Q8NBT3 493 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 RCBTB1Q8NDN9 531 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 PANK1Q8TE04 598 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 C1orf159Q96HA4 380 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 SIRPGQ9P1W8 387 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 HCFC2Q9Y5Z7 792 aa5.66□□□□□ -1.5
HMGB3P23-201ENST00000414981 C22orf46C9J442 243 aa5.65□□□□□ -1.5
HMGB3P23-201ENST00000414981 FGFR1P11362 822 aa5.65□□□□□ -1.5
HMGB3P23-201ENST00000414981 PI3P19957 117 aa5.65□□□□□ -1.5
HMGB3P23-201ENST00000414981 NCKAP1LP55160 1127 aa5.65□□□□□ -1.5
HMGB3P23-201ENST00000414981 LSAMPQ13449 338 aa5.65□□□□□ -1.5
HMGB3P23-201ENST00000414981 PRSS53Q2L4Q9 553 aa5.65□□□□□ -1.5
HMGB3P23-201ENST00000414981 SOGA3Q5TF21 947 aa5.65□□□□□ -1.5
HMGB3P23-201ENST00000414981 MROH9Q5TGP6 573 aa5.65□□□□□ -1.5
HMGB3P23-201ENST00000414981 CNKSR3Q6P9H4 555 aa5.65□□□□□ -1.5
HMGB3P23-201ENST00000414981 RSPO2Q6UXX9 243 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P23-201ENST00000414981 CEP68Q76N32 757 aa5.65□□□□□ -1.5
HMGB3P23-201ENST00000414981 LRRC47Q8N1G4 583 aaKnown RBP5.65□□□□□ -1.5
HMGB3P23-201ENST00000414981 CPA5Q8WXQ8 436 aa5.65□□□□□ -1.5
HMGB3P23-201ENST00000414981 MARCH2Q9P0N8 246 aa5.65□□□□□ -1.5
HMGB3P23-201ENST00000414981 H7BY64 318 aa5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 PDPK1O15530 556 aa5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 DLX3O60479 287 aa5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 EIF5BO60841 1220 aaKnown RBP5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 ASGR2P07307 311 aa5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 ATF2P15336 505 aa5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 GTF2F1P35269 517 aaKnown RBP eCLIP5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 SLC6A11P48066 632 aa5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 FOXO4P98177 505 aa5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 RASGRF1Q13972 1273 aa5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 LRP10Q7Z4F1 713 aa5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 DCP2Q8IU60 420 aaKnown RBP5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 PPIL6Q8IXY8 311 aa5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 ALG3Q92685 438 aa5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 TRMT2BQ96GJ1 504 aaKnown RBP5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 AARSD1Q9BTE6 412 aaKnown RBP5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 IER2Q9BTL4 223 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms