RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 BRDTQ58F21 947 aaPredicted RBP12.97□□□□□ -0.33
RFFL-204ENST00000414419 CCSAPQ6IQ19 270 aaPredicted RBP12.97□□□□□ -0.33
RFFL-204ENST00000414419 RASEFQ8IZ41 740 aa12.97□□□□□ -0.33
RFFL-204ENST00000414419 FANCBQ8NB91 859 aa12.97□□□□□ -0.33
RFFL-204ENST00000414419 SPZ1Q9BXG8 430 aa12.97□□□□□ -0.33
RFFL-204ENST00000414419 UBE2OQ9C0C9 1292 aaKnown RBP12.97□□□□□ -0.33
RFFL-204ENST00000414419 MROH7Q68CQ1 1323 aa12.96□□□□□ -0.33
RFFL-204ENST00000414419 A0A0U1RQG5 324 aaPredicted RBP12.96□□□□□ -0.33
RFFL-204ENST00000414419 A0A1W2PPC1 479 aa12.96□□□□□ -0.33
RFFL-204ENST00000414419 RBM47A0AV96 593 aaKnown RBP12.96□□□□□ -0.33
RFFL-204ENST00000414419 DCDC2CA8MYV0 355 aa12.96□□□□□ -0.33
RFFL-204ENST00000414419 NKRFO15226 690 aaKnown RBP eCLIP12.96□□□□□ -0.33
RFFL-204ENST00000414419 PQBP1O60828 265 aaKnown RBP12.96□□□□□ -0.33
RFFL-204ENST00000414419 CABYRO75952 493 aa12.96□□□□□ -0.33
RFFL-204ENST00000414419 TXNP10599 105 aaKnown RBP12.96□□□□□ -0.33
RFFL-204ENST00000414419 EIF2AK2P19525 551 aaKnown RBP12.96□□□□□ -0.33
RFFL-204ENST00000414419 HSPA4P34932 840 aa12.96□□□□□ -0.33
RFFL-204ENST00000414419 HSD17B4P51659 736 aa12.96□□□□□ -0.33
RFFL-204ENST00000414419 NKX3-2P78367 333 aa12.96□□□□□ -0.33
RFFL-204ENST00000414419 IRX5P78411 483 aaPredicted RBP12.96□□□□□ -0.33
RFFL-204ENST00000414419 MDM2Q00987 491 aaPredicted RBP12.96□□□□□ -0.33
RFFL-204ENST00000414419 ADCK5Q3MIX3 580 aa12.96□□□□□ -0.33
RFFL-204ENST00000414419 SGMS1Q86VZ5 419 aa12.96□□□□□ -0.33
RFFL-204ENST00000414419 MICU3Q86XE3 530 aa12.96□□□□□ -0.33
RFFL-204ENST00000414419 RAB11FIP4Q86YS3 637 aa12.96□□□□□ -0.33
RFFL-204ENST00000414419 GDF15Q99988 308 aa12.96□□□□□ -0.33
RFFL-204ENST00000414419 COL20A1Q9P218 1284 aa12.96□□□□□ -0.33
RFFL-204ENST00000414419 NAP1L2Q9ULW6 460 aaPredicted RBP12.96□□□□□ -0.33
RFFL-204ENST00000414419 NR3C2P08235 984 aa12.95□□□□□ -0.34
RFFL-204ENST00000414419 CLTBP09497 229 aa12.95□□□□□ -0.34
RFFL-204ENST00000414419 HOXA13P31271 388 aaPredicted RBP12.95□□□□□ -0.34
RFFL-204ENST00000414419 BMP8BP34820 402 aa12.95□□□□□ -0.34
RFFL-204ENST00000414419 CPT1AP50416 773 aa12.95□□□□□ -0.34
RFFL-204ENST00000414419 EXOSC10Q01780 885 aaKnown RBP12.95□□□□□ -0.34
RFFL-204ENST00000414419 COL9A3Q14050 684 aaPredicted RBP12.95□□□□□ -0.34
RFFL-204ENST00000414419 SLC35G1Q2M3R5 365 aa12.95□□□□□ -0.34
RFFL-204ENST00000414419 BLOC1S2Q6QNY1 142 aa12.95□□□□□ -0.34
RFFL-204ENST00000414419 SEPT14Q6ZU15 432 aa12.95□□□□□ -0.34
RFFL-204ENST00000414419 FCHSD1Q86WN1 690 aa12.95□□□□□ -0.34
RFFL-204ENST00000414419 CMTR1Q8N1G2 835 aaKnown RBP12.95□□□□□ -0.34
RFFL-204ENST00000414419 CCDC82Q8N4S0 544 aa12.95□□□□□ -0.34
RFFL-204ENST00000414419 OR6J1Q8NGC5 347 aa12.95□□□□□ -0.34
RFFL-204ENST00000414419 CUL5Q93034 780 aa12.95□□□□□ -0.34
RFFL-204ENST00000414419 TCEANC2Q96MN5 208 aa12.95□□□□□ -0.34
RFFL-204ENST00000414419 JAKMIP1Q96N16 626 aaKnown RBP12.95□□□□□ -0.34
RFFL-204ENST00000414419 PRO3102Q9H379 93 aa12.95□□□□□ -0.34
RFFL-204ENST00000414419 PXMP2Q9NR77 195 aa12.95□□□□□ -0.34
RFFL-204ENST00000414419 RBM28Q9NW13 759 aaKnown RBP12.95□□□□□ -0.34
RFFL-204ENST00000414419 ARVCFO00192 962 aa12.94□□□□□ -0.34
RFFL-204ENST00000414419 OPLAHO14841 1288 aa12.94□□□□□ -0.34
RFFL-204ENST00000414419 CTAGE5O15320 804 aa12.94□□□□□ -0.34
RFFL-204ENST00000414419 TLR3O15455 904 aaKnown RBP12.94□□□□□ -0.34
RFFL-204ENST00000414419 ZBTB43O43298 467 aa12.94□□□□□ -0.34
RFFL-204ENST00000414419 EPB41L2O43491 1005 aaKnown RBP12.94□□□□□ -0.34
RFFL-204ENST00000414419 EIF3JO75822 258 aaKnown RBP12.94□□□□□ -0.34
RFFL-204ENST00000414419 PLEKHA8P1O95397 391 aa12.94□□□□□ -0.34
RFFL-204ENST00000414419 MYCLP12524 364 aaPredicted RBP12.94□□□□□ -0.34
RFFL-204ENST00000414419 PSMA5P28066 241 aa12.94□□□□□ -0.34
RFFL-204ENST00000414419 GHRHRQ02643 423 aa12.94□□□□□ -0.34
RFFL-204ENST00000414419 TMEM63BQ5T3F8 832 aa12.94□□□□□ -0.34
RFFL-204ENST00000414419 APOA5Q6Q788 366 aa12.94□□□□□ -0.34
RFFL-204ENST00000414419 CXCL17Q6UXB2 119 aa12.94□□□□□ -0.34
RFFL-204ENST00000414419 SRBD1Q8N5C6 995 aaKnown RBP12.94□□□□□ -0.34
RFFL-204ENST00000414419 SMARCC2Q8TAQ2 1214 aa12.94□□□□□ -0.34
RFFL-204ENST00000414419 TOX2Q96NM4 488 aa12.94□□□□□ -0.34
RFFL-204ENST00000414419 PDLIM7Q9NR12 457 aa12.94□□□□□ -0.34
RFFL-204ENST00000414419 TMEM39AQ9NV64 488 aa12.94□□□□□ -0.34
RFFL-204ENST00000414419 POLR3EQ9NVU0 708 aa12.94□□□□□ -0.34
RFFL-204ENST00000414419 SNX14Q9Y5W7 946 aa12.94□□□□□ -0.34
RFFL-204ENST00000414419 KLF18A0A0U1RQI7 1052 aa12.93□□□□□ -0.34
RFFL-204ENST00000414419 MYL3P08590 195 aa12.93□□□□□ -0.34
RFFL-204ENST00000414419 PTGS1P23219 599 aa12.93□□□□□ -0.34
RFFL-204ENST00000414419 RTN1Q16799 776 aa12.93□□□□□ -0.34
RFFL-204ENST00000414419 Q6ZUG5 572 aa12.93□□□□□ -0.34
RFFL-204ENST00000414419 TMTC3Q6ZXV5 915 aa12.93□□□□□ -0.34
RFFL-204ENST00000414419 ANKRD33Q7Z3H0 272 aa12.93□□□□□ -0.34
RFFL-204ENST00000414419 KCNB2Q92953 911 aa12.93□□□□□ -0.34
RFFL-204ENST00000414419 PDCD2LQ9BRP1 358 aa12.93□□□□□ -0.34
RFFL-204ENST00000414419 SEZ6LQ9BYH1 1024 aa12.93□□□□□ -0.34
RFFL-204ENST00000414419 LTBP2Q14767 1821 aa12.92□□□□□ -0.34
RFFL-204ENST00000414419 GOLGA8AA7E2F4 631 aa12.92□□□□□ -0.34
RFFL-204ENST00000414419 GOLGA8BA8MQT2 603 aa12.92□□□□□ -0.34
RFFL-204ENST00000414419 KPNA6O60684 536 aa12.92□□□□□ -0.34
RFFL-204ENST00000414419 GH1P01241 217 aa12.92□□□□□ -0.34
RFFL-204ENST00000414419 RAG1P15918 1043 aa12.92□□□□□ -0.34
RFFL-204ENST00000414419 CASTP20810 708 aaKnown RBP12.92□□□□□ -0.34
RFFL-204ENST00000414419 CCND2P30279 289 aa12.92□□□□□ -0.34
RFFL-204ENST00000414419 FXR1P51114 621 aaKnown RBP eCLIP12.92□□□□□ -0.34
RFFL-204ENST00000414419 ITGA7Q13683 1181 aa12.92□□□□□ -0.34
RFFL-204ENST00000414419 PGM5Q15124 567 aa12.92□□□□□ -0.34
RFFL-204ENST00000414419 KCNV1Q6PIU1 500 aa12.92□□□□□ -0.34
RFFL-204ENST00000414419 SH3RF1Q7Z6J0 888 aa12.92□□□□□ -0.34
RFFL-204ENST00000414419 TDHQ8IZJ6 230 aa12.92□□□□□ -0.34
RFFL-204ENST00000414419 COPS5Q92905 334 aa12.92□□□□□ -0.34
RFFL-204ENST00000414419 BADQ92934 168 aa12.92□□□□□ -0.34
RFFL-204ENST00000414419 BRPF3Q9ULD4 1205 aa12.92□□□□□ -0.34
RFFL-204ENST00000414419 MRVI1Q9Y6F6 885 aa12.92□□□□□ -0.34
RFFL-204ENST00000414419 CCDC196A0A1B0GTZ2 297 aa12.91□□□□□ -0.34
RFFL-204ENST00000414419 hCG_1642624A0A1W2PR95 340 aa12.91□□□□□ -0.34
RFFL-204ENST00000414419 TRIM43BA6NCK2 446 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms