RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 NUDT12Q9BQG2 462 aa17.72■□□□□ 0.43
HOXD3-202ENST00000410016 RHOXF2Q9BQY4 288 aa17.72■□□□□ 0.43
HOXD3-202ENST00000410016 ABCB6Q9NP58 842 aa17.72■□□□□ 0.43
HOXD3-202ENST00000410016 HDAC6Q9UBN7 1215 aa17.72■□□□□ 0.43
HOXD3-202ENST00000410016 LARP4BQ92615 738 aaKnown RBP17.72■□□□□ 0.43
HOXD3-202ENST00000410016 ATP1A1P05023 1023 aaKnown RBP17.71■□□□□ 0.43
HOXD3-202ENST00000410016 CYLC1P35663 651 aaPredicted RBP17.71■□□□□ 0.43
HOXD3-202ENST00000410016 ADCY7P51828 1080 aa17.71■□□□□ 0.43
HOXD3-202ENST00000410016 GTF2IP78347 998 aa17.71■□□□□ 0.43
HOXD3-202ENST00000410016 CLEC10AQ8IUN9 316 aa17.71■□□□□ 0.43
HOXD3-202ENST00000410016 MSL3Q8N5Y2 521 aaKnown RBP17.71■□□□□ 0.43
HOXD3-202ENST00000410016 DDX4Q9NQI0 724 aaKnown RBP17.71■□□□□ 0.43
HOXD3-202ENST00000410016 KLRG2A4D1S0 409 aaPredicted RBP17.71■□□□□ 0.42
HOXD3-202ENST00000410016 POTEMA6NI47 508 aa17.71■□□□□ 0.42
HOXD3-202ENST00000410016 H3BQF6 201 aa17.71■□□□□ 0.42
HOXD3-202ENST00000410016 HNRNPH3P31942 346 aaKnown RBP17.71■□□□□ 0.42
HOXD3-202ENST00000410016 EHHADHQ08426 723 aa17.71■□□□□ 0.42
HOXD3-202ENST00000410016 PURBQ96QR8 312 aaKnown RBP17.71■□□□□ 0.42
HOXD3-202ENST00000410016 JMJD4Q9H9V9 463 aa17.71■□□□□ 0.42
HOXD3-202ENST00000410016 SUGCTQ9HAC7 445 aa17.71■□□□□ 0.42
HOXD3-202ENST00000410016 ZNHIT6Q9NWK9 470 aaKnown RBP17.71■□□□□ 0.42
HOXD3-202ENST00000410016 C6orf229H3BNL8 230 aa17.7■□□□□ 0.42
HOXD3-202ENST00000410016 ZNF263O14978 683 aa17.7■□□□□ 0.42
HOXD3-202ENST00000410016 KRT86O43790 486 aa17.7■□□□□ 0.42
HOXD3-202ENST00000410016 PPP1R11O60927 126 aaPredicted RBP17.7■□□□□ 0.42
HOXD3-202ENST00000410016 EIF6P56537 245 aaKnown RBP17.7■□□□□ 0.42
HOXD3-202ENST00000410016 PICALMQ13492 652 aa17.7■□□□□ 0.42
HOXD3-202ENST00000410016 KCNK18Q7Z418 384 aa17.7■□□□□ 0.42
HOXD3-202ENST00000410016 GUF1Q8N442 669 aaKnown RBP17.7■□□□□ 0.42
HOXD3-202ENST00000410016 CRAMP1Q96RY5 1269 aa17.7■□□□□ 0.42
HOXD3-202ENST00000410016 PLAGL2Q9UPG8 496 aa17.7■□□□□ 0.42
HOXD3-202ENST00000410016 SIK3Q9Y2K2 1263 aa17.7■□□□□ 0.42
HOXD3-202ENST00000410016 SAR1BQ9Y6B6 198 aa17.7■□□□□ 0.42
HOXD3-202ENST00000410016 DUSP10Q9Y6W6 482 aa17.7■□□□□ 0.42
HOXD3-202ENST00000410016 TUBBP07437 444 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 CLK2P49760 499 aaKnown RBP17.69■□□□□ 0.42
HOXD3-202ENST00000410016 ZNF543Q08ER8 600 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 VWA3BQ502W6 1294 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 PPP4R3AQ6IN85 833 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 WDR93Q6P2C0 686 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 DPP8Q6V1X1 898 aaPredicted RBP17.69■□□□□ 0.42
HOXD3-202ENST00000410016 DYMQ7RTS9 669 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 HDXQ7Z353 690 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 RAD54LQ92698 747 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 JAKMIP2Q96AA8 810 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 GPCPD1Q9NPB8 672 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 RIC8AQ9NPQ8 531 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 PNMA6FA0A0J9YX94 578 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 EPHB6O15197 1021 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 ERLIN1O75477 346 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 TMEM266Q2M3C6 531 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 KIAA1328Q86T90 577 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 ADGRF4Q8IZF3 695 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 CERS5Q8N5B7 392 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 NDST4Q9H3R1 872 aa17.69■□□□□ 0.42
HOXD3-202ENST00000410016 SRGAP2O75044 1071 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 TTLL1O95922 423 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 CYP27A1Q02318 531 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 DDR1Q08345 913 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 ECM1Q16610 540 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 TMEM119Q4V9L6 283 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 FKBP15Q5T1M5 1219 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 EHBP1Q8NDI1 1231 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 HAS1Q92839 578 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 PCMTD1Q96MG8 357 aaPredicted RBP17.68■□□□□ 0.42
HOXD3-202ENST00000410016 MMS19Q96T76 1030 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 EP400Q96L91 3159 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 ERICH4A6NGS2 130 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 PLEKP08567 350 aaPredicted RBP17.68■□□□□ 0.42
HOXD3-202ENST00000410016 TTBK2Q6IQ55 1244 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 DDX12PQ92771 950 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 IQCDQ96DY2 449 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 RAB34Q9BZG1 259 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 SUGT1Q9Y2Z0 365 aa17.68■□□□□ 0.42
HOXD3-202ENST00000410016 LRRC55Q6ZSA7 311 aa17.67■□□□□ 0.42
HOXD3-202ENST00000410016 GLIS3Q8NEA6 775 aa17.67■□□□□ 0.42
HOXD3-202ENST00000410016 SNX29Q8TEQ0 813 aa17.67■□□□□ 0.42
HOXD3-202ENST00000410016 CDK5RAP3Q96JB5 506 aa17.67■□□□□ 0.42
HOXD3-202ENST00000410016 GJD4Q96KN9 370 aaPredicted RBP17.67■□□□□ 0.42
HOXD3-202ENST00000410016 PDE11AQ9HCR9 933 aa17.67■□□□□ 0.42
HOXD3-202ENST00000410016 ARHGAP20Q9P2F6 1191 aa17.67■□□□□ 0.42
HOXD3-202ENST00000410016 SERPINB13Q9UIV8 391 aa17.67■□□□□ 0.42
HOXD3-202ENST00000410016 ABCB11O95342 1321 aa17.67■□□□□ 0.42
HOXD3-202ENST00000410016 SHMT1P34896 483 aa17.67■□□□□ 0.42
HOXD3-202ENST00000410016 LRRC63Q05C16 580 aa17.67■□□□□ 0.42
HOXD3-202ENST00000410016 UBE2SQ16763 222 aa17.67■□□□□ 0.42
HOXD3-202ENST00000410016 KRT79Q5XKE5 535 aa17.67■□□□□ 0.42
HOXD3-202ENST00000410016 PPP1R18Q6NYC8 613 aa17.67■□□□□ 0.42
HOXD3-202ENST00000410016 SP8Q8IXZ3 490 aa17.67■□□□□ 0.42
HOXD3-202ENST00000410016 COA1Q9GZY4 146 aa17.67■□□□□ 0.42
HOXD3-202ENST00000410016 FOCADQ5VW36 1801 aa17.67■□□□□ 0.42
HOXD3-202ENST00000410016 POLRMTO00411 1230 aaKnown RBP17.66■□□□□ 0.42
HOXD3-202ENST00000410016 TNNI2P48788 182 aa17.66■□□□□ 0.42
HOXD3-202ENST00000410016 VAV2P52735 878 aa17.66■□□□□ 0.42
HOXD3-202ENST00000410016 USP14P54578 494 aa17.66■□□□□ 0.42
HOXD3-202ENST00000410016 MAN2A1Q16706 1144 aa17.66■□□□□ 0.42
HOXD3-202ENST00000410016 FOXR2Q6PJQ5 311 aa17.66■□□□□ 0.42
HOXD3-202ENST00000410016 KRT26Q7Z3Y9 468 aa17.66■□□□□ 0.42
HOXD3-202ENST00000410016 DNAJC19Q96DA6 116 aa17.66■□□□□ 0.42
HOXD3-202ENST00000410016 MTMR8Q96EF0 704 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms