RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 SCTRP47872 440 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 GMPSP49915 693 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-202ENST00000409915 EIF6P56537 245 aaKnown RBP5.33□□□□□ -1.56
SF3B1-202ENST00000409915 SSRP1Q08945 709 aaKnown RBP5.33□□□□□ -1.56
SF3B1-202ENST00000409915 APOBRQ0VD83 1088 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 MTX1Q13505 466 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 PIN1Q13526 163 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-202ENST00000409915 SIM2Q14190 667 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-202ENST00000409915 ALFQ53S48 1182 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 FAM83BQ5T0W9 1011 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 ANO1Q5XXA6 986 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 LARP1BQ659C4 914 aaKnown RBP5.33□□□□□ -1.56
SF3B1-202ENST00000409915 CIAPIN1Q6FI81 312 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 CCDC70Q6NSX1 233 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 CEP85Q6P2H3 762 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 SPATC1Q76KD6 591 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 PODNQ7Z5L7 613 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 SH3RF1Q7Z6J0 888 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 RNF180Q86T96 592 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 SLC9A9Q8IVB4 645 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 VGLL2Q8N8G2 317 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 TRIM56Q9BRZ2 755 aaKnown RBP5.33□□□□□ -1.56
SF3B1-202ENST00000409915 MXD3Q9BW11 206 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 ZC3H12CQ9C0D7 883 aaKnown RBP5.33□□□□□ -1.56
SF3B1-202ENST00000409915 ANKRD2Q9GZV1 360 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 SENP2Q9HC62 589 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 GOLGA6AQ9NYA3 693 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 PPP2R3BQ9Y5P8 575 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-202ENST00000409915 WDR90Q96KV7 1748 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 MROH5Q6ZUA9 1318 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 DYTNA2CJ06 578 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 ADORA1P30542 326 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 EPS15P42566 896 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 RAB15P59190 212 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 FOXK2Q01167 660 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 FAM160A1Q05DH4 1040 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 TFCP2Q12800 502 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 NNTQ13423 1086 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 DGKZQ13574 1117 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 ARID5BQ14865 1188 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 GFOD2Q3B7J2 385 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 PERM1Q5SV97 790 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 FAM102BQ5T8I3 360 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 NXNQ6DKJ4 435 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 FBXL19Q6PCT2 694 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 DGKHQ86XP1 1220 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 TCEAL8Q8IYN2 117 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 CPXCR1Q8N123 301 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 GPC2Q8N158 579 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-202ENST00000409915 GPR152Q8TDT2 470 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 CRBNQ96SW2 442 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 KLF16Q9BXK1 252 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-202ENST00000409915 BCO2Q9BYV7 579 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 TSPYL1Q9H0U9 437 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 AASDHPPTQ9NRN7 309 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 ZNF69Q9UC07 566 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 ZHX1Q9UKY1 873 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-202ENST00000409915 DDX19BQ9UMR2 479 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 PPT2Q9UMR5 302 aa5.32□□□□□ -1.56
SF3B1-202ENST00000409915 ZNF609O15014 1411 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 E2F8A0AVK6 867 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 CAPN5O15484 640 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 PRPF3O43395 683 aaKnown RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 SURF6O75683 361 aaKnown RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 CIAO1O76071 339 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 PDE8BO95263 885 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 GJB6O95452 261 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 EGFRP00533 1210 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 VEGFAP15692 232 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 EPHX2P34913 555 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 GRM5P41594 1212 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 PPM1FP49593 454 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 MRE11P49959 708 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 NEK3P51956 506 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 PSMA6P60900 246 aaKnown RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 ATP8B2P98198 1209 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 PURAQ00577 322 aaKnown RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 CHAF1AQ13111 956 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 PDE3AQ14432 1141 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 AGERQ15109 404 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 PUM3Q15397 648 aaKnown RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 CCDC85BQ15834 202 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 FXNQ16595 210 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 ATP2B3Q16720 1220 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 SLC4A8Q2Y0W8 1093 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 IL31Q6EBC2 164 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 KIAA1211Q6ZU35 1233 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 ZNF804AQ7Z570 1209 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 SIRT2Q8IXJ6 389 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 C16orf71Q8IYS4 520 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 AFAP1L2Q8N4X5 818 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 MAGEB6Q8N7X4 407 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 ANKRD42Q8N9B4 389 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 ZSWIM2Q8NEG5 633 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 RIN3Q8TB24 985 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 SSH3Q8TE77 659 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 NKD1Q969G9 470 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms