RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 PHF20L1A8MW92 1017 aa6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 VIMP08670 466 aaKnown RBP6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 MRPS35P82673 323 aaKnown RBP6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 ATP11AP98196 1134 aa6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 ERMARDQ5T6L9 678 aa6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 MTHFD1LQ6UB35 978 aa6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 CYB5R4Q7L1T6 521 aa6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 GALNT15Q8N3T1 639 aa6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 DTNBP1Q96EV8 351 aa6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 PCMTD1Q96MG8 357 aaPredicted RBP6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 XPO6Q96QU8 1125 aaKnown RBP6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 TLR10Q9BXR5 811 aa6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 LY9Q9HBG7 655 aa6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 CABP5Q9NP86 173 aa6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 CHCHD3Q9NX63 227 aaKnown RBP6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 KCNJ14Q9UNX9 436 aa6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 TMEM94Q12767 1356 aa6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 NFAT5O94916 1531 aa6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 XDHP47989 1333 aa6.43□□□□□ -1.38
R3HDM1-202ENST00000409478 PIK3C2AO00443 1686 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 COBLO75128 1261 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 RPN1P04843 607 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 SETSIPP0DME0 302 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 CNGA1P29973 690 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 CTCFP49711 727 aaPredicted RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 KIF11P52732 1056 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 SNX1Q13596 522 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 HLTFQ14527 1009 aaKnown RBP eCLIP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 AMOTQ4VCS5 1084 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 TMEM67Q5HYA8 995 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 TRPM8Q7Z2W7 1104 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 SDCCAG8Q86SQ7 713 aaPredicted RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 IRF2BP1Q8IU81 584 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 LMNTD2Q8IXW0 634 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 IGDCC4Q8TDY8 1250 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 IFT74Q96LB3 600 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 PSMB7Q99436 277 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 KRT12Q99456 494 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 KCNMB3Q9NPA1 279 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 SMARCAL1Q9NZC9 954 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 ANKIB1Q9P2G1 1089 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 ZBTB12Q9Y330 459 aaPredicted RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 ROBO2Q9HCK4 1378 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 F8W031 263 aaPredicted RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 ZNF263O14978 683 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 RNMTO43148 476 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 NPTXRO95502 500 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 CSB-PGBD3P0DP91 1061 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 GNAT1P11488 350 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 PRCPP42785 496 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 EIF3BP55884 814 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 LACTBP83111 547 aaPredicted RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 PDIA5Q14554 519 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 PDIA6Q15084 440 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 TBC1D25Q3MII6 688 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 ANKRD20A2Q5SQ80 823 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 ANKRD20A1Q5TYW2 823 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 ANKRD20A3Q5VUR7 823 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 PIGWQ7Z7B1 504 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 ADSSL1Q8N142 457 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 LTV1Q96GA3 475 aaPredicted RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 TUBGCP2Q9BSJ2 902 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 BLZF1Q9H2G9 400 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 LUC7LQ9NQ29 371 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 PANK4Q9NVE7 773 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 NOVA2Q9UNW9 492 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 PLAGL2Q9UPG8 496 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 E7ENQ6 273 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 CES2O00748 559 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 PSMA7O14818 248 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 GPAA1O43292 621 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 WFS1O76024 890 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 MYBP10242 640 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 NLRP6P59044 892 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 MAGOHP61326 146 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 FKBP4Q02790 459 aaKnown RBP eCLIP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 NR5A1Q13285 461 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 CMPK2Q5EBM0 449 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 C1orf141Q5JVX7 400 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 SPDYCQ5MJ68 293 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 KLHDC7AQ5VTJ3 777 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 ZNF530Q6P9A1 599 aaPredicted RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 MAGOHBQ96A72 148 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 NAF1Q96HR8 494 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 TRIM47Q96LD4 638 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 EHD2Q9NZN4 543 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 SLIT3O75094 1523 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 AKR1B10O60218 316 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 CTNND1O60716 968 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 RCAN1P53805 252 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 LBRQ14739 615 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 TAF11Q15544 211 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 PDXDC2PQ6P474 469 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 ATG9AQ7Z3C6 839 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 HOOK3Q86VS8 718 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 NGDNQ8NEJ9 315 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 EZH1Q92800 747 aaPredicted RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 ERGIC2Q96RQ1 377 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 UBAC1Q9BSL1 405 aa6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms