RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 CLEC4GQ6UXB4 293 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 U2AF1L4Q8WU68 220 aaKnown RBP5.46□□□□□ -1.54
SMAD4-202ENST00000398417 RIN2Q8WYP3 895 aaPredicted RBP5.46□□□□□ -1.54
SMAD4-202ENST00000398417 LARP4BQ92615 738 aaKnown RBP5.46□□□□□ -1.54
SMAD4-202ENST00000398417 NDST4Q9H3R1 872 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 KCND1Q9NSA2 647 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 MAD2L2Q9UI95 211 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 EP400Q96L91 3159 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 SHTN1A0MZ66 631 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 DDX39AO00148 427 aaKnown RBP5.46□□□□□ -1.54
SMAD4-202ENST00000398417 PCP11498 1178 aaKnown RBP5.46□□□□□ -1.54
SMAD4-202ENST00000398417 PLCG2P16885 1265 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 EEF1GP26641 437 aaKnown RBP5.46□□□□□ -1.54
SMAD4-202ENST00000398417 GUCY2FP51841 1108 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 MRPL12P52815 198 aaKnown RBP5.46□□□□□ -1.54
SMAD4-202ENST00000398417 SLC7A5Q01650 507 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 ARL6IP4Q66PJ3 421 aaKnown RBP5.46□□□□□ -1.54
SMAD4-202ENST00000398417 SLFN13Q68D06 897 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 IL17RBQ9NRM6 502 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 ZBTB21Q9ULJ3 1066 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 PRPF6O94906 941 aaKnown RBP5.46□□□□□ -1.54
SMAD4-202ENST00000398417 TAL1P17542 331 aaPredicted RBP5.46□□□□□ -1.54
SMAD4-202ENST00000398417 CFAP58Q5T655 872 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 REXO1Q8N1G1 1221 aaKnown RBP5.46□□□□□ -1.54
SMAD4-202ENST00000398417 NEDD1Q8NHV4 660 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 TBC1D5Q92609 795 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 FAM204AQ9H8W3 233 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 KNDC1Q76NI1 1749 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.46□□□□□ -1.54
SMAD4-202ENST00000398417 CLIC2O15247 247 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 CCDC65Q8IXS2 484 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 PNMA5Q96PV4 448 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 IFIH1Q9BYX4 1025 aaKnown RBP5.46□□□□□ -1.54
SMAD4-202ENST00000398417 MYMKA6NI61 221 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 RNF40O75150 1001 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 SRGNP10124 158 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 PPP1R2P41236 205 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 GFPT1Q06210 699 aaPredicted RBP5.45□□□□□ -1.54
SMAD4-202ENST00000398417 PRR16Q569H4 304 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 GALNT17Q6IS24 598 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 C8orf74Q6P047 294 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 CCDC43Q96MW1 224 aaKnown RBP5.45□□□□□ -1.54
SMAD4-202ENST00000398417 FUT8Q9BYC5 575 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 BARHL2Q9NY43 387 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 SLIT3O75094 1523 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 FUT2Q10981 343 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 SF3A3Q12874 501 aaKnown RBP eCLIP5.45□□□□□ -1.54
SMAD4-202ENST00000398417 ADAM9Q13443 819 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 CCDC157Q569K6 752 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 SMYD5Q6GMV2 418 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 MICALL1Q8N3F8 863 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 RDH13Q8NBN7 331 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 DUSP9Q99956 384 aaKnown RBP5.45□□□□□ -1.54
SMAD4-202ENST00000398417 LZTS2Q9BRK4 669 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 PSTPIP2Q9H939 334 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 COL5A2P05997 1499 aaPredicted RBP5.45□□□□□ -1.54
SMAD4-202ENST00000398417 RHOBTB3O94955 611 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 CYP4A11Q02928 519 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 PABPC4Q13310 644 aaKnown RBP eCLIP5.45□□□□□ -1.54
SMAD4-202ENST00000398417 VWA3BQ502W6 1294 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 MSL1Q68DK7 614 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 RSRC2Q7L4I2 434 aaKnown RBP5.45□□□□□ -1.54
SMAD4-202ENST00000398417 NAP1L4Q99733 375 aaKnown RBP5.45□□□□□ -1.54
SMAD4-202ENST00000398417 DPH5Q9H2P9 285 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 SEMA6BQ9H3T3 888 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 DBNDD1Q9H9R9 158 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 GOPCQ9HD26 462 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 DDX25Q9UHL0 483 aaKnown RBP5.45□□□□□ -1.54
SMAD4-202ENST00000398417 DAGLAQ9Y4D2 1042 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 SFI1A8K8P3 1242 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 VGLL3A8MV65 326 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 CETN3O15182 167 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 RFX1P22670 979 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 USP8P40818 1118 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 DNAAF5Q86Y56 855 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 FAM133AQ8N9E0 248 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 FAM76AQ8TAV0 307 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 ZNF384Q8TF68 577 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 CAPN11Q9UMQ6 739 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 REXO2Q9Y3B8 237 aaKnown RBP5.45□□□□□ -1.54
SMAD4-202ENST00000398417 ITIH6Q6UXX5 1313 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 LRRIQ3A6PVS8 624 aaPredicted RBP5.45□□□□□ -1.54
SMAD4-202ENST00000398417 EIF3CLB5ME19 914 aaKnown RBP5.45□□□□□ -1.54
SMAD4-202ENST00000398417 OPA1O60313 960 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 FAM13AO94988 1023 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 PBX1P40424 430 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 CTTNQ14247 550 aaKnown RBP5.45□□□□□ -1.54
SMAD4-202ENST00000398417 NOX5Q96PH1 765 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 EIF3CQ99613 913 aaKnown RBP5.45□□□□□ -1.54
SMAD4-202ENST00000398417 TRIM31Q9BZY9 425 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 LUC7LQ9NQ29 371 aaKnown RBP5.45□□□□□ -1.54
SMAD4-202ENST00000398417 TOM1O60784 492 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 MAN2A1Q16706 1144 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 TMED8Q6PL24 325 aaPredicted RBP5.45□□□□□ -1.54
SMAD4-202ENST00000398417 VTI1AQ96AJ9 217 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 KRT12Q99456 494 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 KIAA1024Q9UPX6 916 aa5.45□□□□□ -1.54
SMAD4-202ENST00000398417 PVALEFA0A1B0GWK0 134 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 TCP10L2B9ZVM9 353 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 ARHGAP25P42331 645 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms