RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ACAD9Q9H845 621 aa31.23■■■□□ 2.59
CPNE1-203ENST00000397442 TMEM63CQ9P1W3 806 aa31.23■■■□□ 2.59
CPNE1-203ENST00000397442 RABGAP1Q9Y3P9 1069 aa31.23■■■□□ 2.59
CPNE1-203ENST00000397442 CYP3A4P08684 503 aa31.22■■■□□ 2.59
CPNE1-203ENST00000397442 GCFC2P16383 781 aaKnown RBP31.22■■■□□ 2.59
CPNE1-203ENST00000397442 MOXD1Q6UVY6 613 aa31.22■■■□□ 2.59
CPNE1-203ENST00000397442 NSMFQ6X4W1 530 aa31.22■■■□□ 2.59
CPNE1-203ENST00000397442 RNF207Q6ZRF8 634 aa31.22■■■□□ 2.59
CPNE1-203ENST00000397442 POTEDQ86YR6 584 aa31.22■■■□□ 2.59
CPNE1-203ENST00000397442 ZNF579Q8NAF0 562 aaKnown RBP31.22■■■□□ 2.59
CPNE1-203ENST00000397442 RPTORQ8N122 1335 aa31.22■■■□□ 2.59
CPNE1-203ENST00000397442 TMEM88BA6NKF7 163 aa31.22■■■□□ 2.59
CPNE1-203ENST00000397442 RESP18Q5W5W9 173 aa31.22■■■□□ 2.59
CPNE1-203ENST00000397442 ZNF784Q8NCA9 323 aaPredicted RBP31.22■■■□□ 2.59
CPNE1-203ENST00000397442 CHST13Q8NET6 341 aa31.22■■■□□ 2.59
CPNE1-203ENST00000397442 ENGASEQ8NFI3 743 aa31.22■■■□□ 2.59
CPNE1-203ENST00000397442 CSRNP2Q9H175 543 aa31.22■■■□□ 2.59
CPNE1-203ENST00000397442 FAM155AB1AL88 458 aaPredicted RBP31.21■■■□□ 2.59
CPNE1-203ENST00000397442 CIITAP33076 1130 aa31.21■■■□□ 2.59
CPNE1-203ENST00000397442 PRPHP41219 470 aa31.21■■■□□ 2.59
CPNE1-203ENST00000397442 BAATQ14032 418 aaPredicted RBP31.21■■■□□ 2.59
CPNE1-203ENST00000397442 MTMR9Q96QG7 549 aa31.21■■■□□ 2.59
CPNE1-203ENST00000397442 NAP1L4Q99733 375 aaKnown RBP31.21■■■□□ 2.59
CPNE1-203ENST00000397442 MOV10L1Q9BXT6 1211 aaKnown RBP31.21■■■□□ 2.59
CPNE1-203ENST00000397442 MAF1Q9H063 256 aa31.21■■■□□ 2.59
CPNE1-203ENST00000397442 A0A1B0GVL5 298 aa31.2■■■□□ 2.59
CPNE1-203ENST00000397442 NR1I2O75469 434 aa31.2■■■□□ 2.59
CPNE1-203ENST00000397442 OR52Z1P0C646 297 aa31.2■■■□□ 2.59
CPNE1-203ENST00000397442 YY1P25490 414 aa31.2■■■□□ 2.59
CPNE1-203ENST00000397442 FSTL1Q12841 308 aa31.2■■■□□ 2.59
CPNE1-203ENST00000397442 SNW1Q13573 536 aaKnown RBP31.2■■■□□ 2.59
CPNE1-203ENST00000397442 Q3C1V9 767 aa31.2■■■□□ 2.59
CPNE1-203ENST00000397442 SPECC1Q5M775 1068 aa31.2■■■□□ 2.59
CPNE1-203ENST00000397442 A1CFQ9NQ94 594 aaKnown RBP31.2■■■□□ 2.59
CPNE1-203ENST00000397442 DDX25Q9UHL0 483 aaKnown RBP31.2■■■□□ 2.59
CPNE1-203ENST00000397442 FRMPD4Q14CM0 1322 aa31.2■■■□□ 2.58
CPNE1-203ENST00000397442 FAM237AA0A1B0GTK4 181 aa31.19■■■□□ 2.58
CPNE1-203ENST00000397442 VWA3AA6NCI4 1184 aa31.19■■■□□ 2.58
CPNE1-203ENST00000397442 DACT1Q9NYF0 836 aa31.19■■■□□ 2.58
CPNE1-203ENST00000397442 ABT1Q9ULW3 272 aaKnown RBP31.19■■■□□ 2.58
CPNE1-203ENST00000397442 MANSC4A6NHS7 340 aaPredicted RBP31.19■■■□□ 2.58
CPNE1-203ENST00000397442 NDUFA8P51970 172 aa31.19■■■□□ 2.58
CPNE1-203ENST00000397442 UBXN2AP68543 259 aa31.19■■■□□ 2.58
CPNE1-203ENST00000397442 GTF3C2Q8WUA4 911 aaPredicted RBP31.19■■■□□ 2.58
CPNE1-203ENST00000397442 HHIPL1Q96JK4 782 aa31.19■■■□□ 2.58
CPNE1-203ENST00000397442 TAAR1Q96RJ0 339 aa31.19■■■□□ 2.58
CPNE1-203ENST00000397442 R3HDMLQ9H3Y0 253 aa31.19■■■□□ 2.58
CPNE1-203ENST00000397442 EHMT1Q9H9B1 1298 aa31.19■■■□□ 2.58
CPNE1-203ENST00000397442 CYP39A1Q9NYL5 469 aa31.19■■■□□ 2.58
CPNE1-203ENST00000397442 HPSEQ9Y251 543 aa31.19■■■□□ 2.58
CPNE1-203ENST00000397442 FAM86B1E9PN63 330 aa31.18■■■□□ 2.58
CPNE1-203ENST00000397442 FAM86B2P0C5J1 330 aa31.18■■■□□ 2.58
CPNE1-203ENST00000397442 PFKFB1P16118 471 aa31.18■■■□□ 2.58
CPNE1-203ENST00000397442 FAM160A1Q05DH4 1040 aa31.18■■■□□ 2.58
CPNE1-203ENST00000397442 LENG9Q96B70 501 aa31.18■■■□□ 2.58
CPNE1-203ENST00000397442 PURBQ96QR8 312 aaKnown RBP31.18■■■□□ 2.58
CPNE1-203ENST00000397442 GZF1Q9H116 711 aaPredicted RBP31.18■■■□□ 2.58
CPNE1-203ENST00000397442 LCTP09848 1927 aa31.17■■■□□ 2.58
CPNE1-203ENST00000397442 CALCRLQ16602 461 aa31.17■■■□□ 2.58
CPNE1-203ENST00000397442 CCDC73Q6ZRK6 1079 aa31.17■■■□□ 2.58
CPNE1-203ENST00000397442 USP49Q70CQ1 688 aa31.17■■■□□ 2.58
CPNE1-203ENST00000397442 FMR1NBQ8N0W7 255 aaPredicted RBP31.17■■■□□ 2.58
CPNE1-203ENST00000397442 SMCR8Q8TEV9 937 aaPredicted RBP31.17■■■□□ 2.58
CPNE1-203ENST00000397442 FBXO40Q9UH90 709 aa31.17■■■□□ 2.58
CPNE1-203ENST00000397442 ERVK-9P63128 1117 aa31.16■■■□□ 2.58
CPNE1-203ENST00000397442 ERVK-24P63145 666 aa31.16■■■□□ 2.58
CPNE1-203ENST00000397442 Q4G0T1 1027 aa31.16■■■□□ 2.58
CPNE1-203ENST00000397442 DTHD1Q6ZMT9 781 aa31.16■■■□□ 2.58
CPNE1-203ENST00000397442 HAS1Q92839 578 aa31.16■■■□□ 2.58
CPNE1-203ENST00000397442 IGF2BP3O00425 579 aaKnown RBP eCLIP31.16■■■□□ 2.582e-7■■■■□ 20.3
CPNE1-203ENST00000397442 SLC25A27O95847 323 aa31.16■■■□□ 2.58
CPNE1-203ENST00000397442 ERCC3P19447 782 aa31.16■■■□□ 2.58
CPNE1-203ENST00000397442 NCAPG2Q86XI2 1143 aa31.16■■■□□ 2.58
CPNE1-203ENST00000397442 IL31RAQ8NI17 732 aa31.16■■■□□ 2.58
CPNE1-203ENST00000397442 CYP2W1Q8TAV3 490 aa31.16■■■□□ 2.58
CPNE1-203ENST00000397442 CCDC102AQ96A19 550 aa31.16■■■□□ 2.58
CPNE1-203ENST00000397442 IGLV3-22A0A075B6J6 115 aa31.15■■■□□ 2.58
CPNE1-203ENST00000397442 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.15■■■□□ 2.583e-8■□□□□ 9.3
CPNE1-203ENST00000397442 KCNMB3Q9NPA1 279 aa31.15■■■□□ 2.58
CPNE1-203ENST00000397442 PRR16Q569H4 304 aa31.14■■■□□ 2.58
CPNE1-203ENST00000397442 PARK7Q99497 189 aaKnown RBP31.14■■■□□ 2.58
CPNE1-203ENST00000397442 PXMP2Q9NR77 195 aa31.14■■■□□ 2.58
CPNE1-203ENST00000397442 LONP1P36776 959 aaKnown RBP31.13■■■□□ 2.57
CPNE1-203ENST00000397442 GCLCP48506 637 aaPredicted RBP31.13■■■□□ 2.57
CPNE1-203ENST00000397442 EPSTI1Q96J88 318 aa31.13■■■□□ 2.57
CPNE1-203ENST00000397442 RMDN3Q96TC7 470 aa31.13■■■□□ 2.57
CPNE1-203ENST00000397442 COPB2P35606 906 aa31.13■■■□□ 2.57
CPNE1-203ENST00000397442 SYMPKQ92797 1274 aaKnown RBP31.13■■■□□ 2.57
CPNE1-203ENST00000397442 ANP32EQ9BTT0 268 aa31.13■■■□□ 2.57
CPNE1-203ENST00000397442 DDX19AQ9NUU7 478 aaKnown RBP31.13■■■□□ 2.57
CPNE1-203ENST00000397442 MORF4L1Q9UBU8 362 aa31.13■■■□□ 2.57
CPNE1-203ENST00000397442 EIF2AK2P19525 551 aaKnown RBP31.12■■■□□ 2.57
CPNE1-203ENST00000397442 PGM5Q15124 567 aa31.12■■■□□ 2.57
CPNE1-203ENST00000397442 CCDC183Q5T5S1 534 aa31.12■■■□□ 2.57
CPNE1-203ENST00000397442 PCNX4Q63HM2 1172 aa31.12■■■□□ 2.57
CPNE1-203ENST00000397442 ANKRD13CQ8N6S4 541 aa31.12■■■□□ 2.57
CPNE1-203ENST00000397442 GPRC5AQ8NFJ5 357 aa31.12■■■□□ 2.57
CPNE1-203ENST00000397442 ETNPPLQ8TBG4 499 aa31.12■■■□□ 2.57
CPNE1-203ENST00000397442 SYAP1Q96A49 352 aaPredicted RBP31.12■■■□□ 2.57
CPNE1-203ENST00000397442 PDCD2LQ9BRP1 358 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms