RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 DEXIO95424 95 aa33.78■■■■□ 3
CHCHD4-202ENST00000396914 TFRCP02786 760 aaKnown RBP33.78■■■■□ 3
CHCHD4-202ENST00000396914 ANO1Q5XXA6 986 aa33.78■■■■□ 3
CHCHD4-202ENST00000396914 TYW1BQ6NUM6 668 aa33.78■■■■□ 3
CHCHD4-202ENST00000396914 U2AF1L4Q8WU68 220 aaKnown RBP33.78■■■■□ 3
CHCHD4-202ENST00000396914 PXMP2Q9NR77 195 aa33.78■■■■□ 3
CHCHD4-202ENST00000396914 LOC102724159A0A0B4J2E5 919 aa33.77■■■■□ 3
CHCHD4-202ENST00000396914 ZNF865P0CJ78 1059 aaPredicted RBP33.77■■■■□ 3
CHCHD4-202ENST00000396914 PWP2Q15269 919 aaKnown RBP33.77■■■■□ 3
CHCHD4-202ENST00000396914 UBE2SQ16763 222 aa33.77■■■■□ 3
CHCHD4-202ENST00000396914 IL27Q8NEV9 243 aa33.77■■■■□ 3
CHCHD4-202ENST00000396914 DDX20Q9UHI6 824 aaKnown RBP33.77■■■■□ 3
CHCHD4-202ENST00000396914 SEPT4O43236 478 aa33.76■■■□□ 2.99
CHCHD4-202ENST00000396914 CCDC83Q8IWF9 413 aa33.76■■■□□ 2.99
CHCHD4-202ENST00000396914 FBXO16Q8IX29 292 aaPredicted RBP33.76■■■□□ 2.99
CHCHD4-202ENST00000396914 SH2B1Q9NRF2 756 aaPredicted RBP33.76■■■□□ 2.99
CHCHD4-202ENST00000396914 MEIS2O14770 477 aa33.75■■■□□ 2.99
CHCHD4-202ENST00000396914 SGPL1O95470 568 aa33.75■■■□□ 2.99
CHCHD4-202ENST00000396914 EN2P19622 333 aaPredicted RBP33.75■■■□□ 2.99
CHCHD4-202ENST00000396914 IWS1Q96ST2 819 aa33.75■■■□□ 2.99
CHCHD4-202ENST00000396914 RIC8AQ9NPQ8 531 aa33.75■■■□□ 2.99
CHCHD4-202ENST00000396914 VPS54Q9P1Q0 977 aa33.75■■■□□ 2.99
CHCHD4-202ENST00000396914 FAM184BQ9ULE4 1060 aa33.75■■■□□ 2.99
CHCHD4-202ENST00000396914 PIK3CDO00329 1044 aa33.74■■■□□ 2.99
CHCHD4-202ENST00000396914 MSCO60682 206 aa33.74■■■□□ 2.99
CHCHD4-202ENST00000396914 CTDNEP1O95476 244 aa33.74■■■□□ 2.99
CHCHD4-202ENST00000396914 MYCLP12524 364 aaPredicted RBP33.74■■■□□ 2.99
CHCHD4-202ENST00000396914 AKR1A1P14550 325 aa33.74■■■□□ 2.99
CHCHD4-202ENST00000396914 GJA8P48165 433 aa33.74■■■□□ 2.99
CHCHD4-202ENST00000396914 CCDC148Q8NFR7 591 aa33.74■■■□□ 2.99
CHCHD4-202ENST00000396914 MORC4Q8TE76 937 aa33.74■■■□□ 2.99
CHCHD4-202ENST00000396914 C6orf50Q9HD87 102 aa33.74■■■□□ 2.99
CHCHD4-202ENST00000396914 ORC3Q9UBD5 711 aaPredicted RBP33.74■■■□□ 2.99
CHCHD4-202ENST00000396914 SPDYE3A6NKU9 549 aa33.73■■■□□ 2.99
CHCHD4-202ENST00000396914 CCDC144BQ3MJ40 725 aa33.73■■■□□ 2.99
CHCHD4-202ENST00000396914 GLT8D2Q9H1C3 349 aa33.73■■■□□ 2.99
CHCHD4-202ENST00000396914 VTA1Q9NP79 307 aa33.73■■■□□ 2.99
CHCHD4-202ENST00000396914 NR3C2P08235 984 aa33.72■■■□□ 2.99
CHCHD4-202ENST00000396914 STXBP2Q15833 593 aa33.72■■■□□ 2.99
CHCHD4-202ENST00000396914 STK36Q9NRP7 1315 aa33.72■■■□□ 2.99
CHCHD4-202ENST00000396914 MYCNP04198 464 aaPredicted RBP33.71■■■□□ 2.99
CHCHD4-202ENST00000396914 EDNRBP24530 442 aa33.71■■■□□ 2.99
CHCHD4-202ENST00000396914 NLRP5P59047 1200 aa33.71■■■□□ 2.99
CHCHD4-202ENST00000396914 PDCD2LQ9BRP1 358 aa33.71■■■□□ 2.99
CHCHD4-202ENST00000396914 RARBP10826 455 aa33.7■■■□□ 2.99
CHCHD4-202ENST00000396914 MCM2P49736 904 aa33.7■■■□□ 2.99
CHCHD4-202ENST00000396914 PGM5Q15124 567 aa33.7■■■□□ 2.99
CHCHD4-202ENST00000396914 NSUN7Q8NE18 718 aaKnown RBP33.7■■■□□ 2.99
CHCHD4-202ENST00000396914 WASF1Q92558 559 aa33.7■■■□□ 2.99
CHCHD4-202ENST00000396914 AIFM3Q96NN9 605 aa33.7■■■□□ 2.99
CHCHD4-202ENST00000396914 KATNBL1Q9H079 304 aa33.7■■■□□ 2.99
CHCHD4-202ENST00000396914 SH3GLB2Q9NR46 395 aa33.7■■■□□ 2.99
CHCHD4-202ENST00000396914 PDGFCQ9NRA1 345 aa33.7■■■□□ 2.99
CHCHD4-202ENST00000396914 CD2BP2O95400 341 aaKnown RBP33.7■■■□□ 2.98
CHCHD4-202ENST00000396914 GNA11P29992 359 aa33.7■■■□□ 2.98
CHCHD4-202ENST00000396914 CCND2P30279 289 aa33.7■■■□□ 2.98
CHCHD4-202ENST00000396914 ADCYAP1R1P41586 468 aa33.7■■■□□ 2.98
CHCHD4-202ENST00000396914 LHX8Q68G74 356 aa33.7■■■□□ 2.98
CHCHD4-202ENST00000396914 JAK2O60674 1132 aa33.69■■■□□ 2.98
CHCHD4-202ENST00000396914 ST3GAL1Q11201 340 aa33.69■■■□□ 2.98
CHCHD4-202ENST00000396914 LENG1Q96BZ8 264 aaPredicted RBP33.69■■■□□ 2.98
CHCHD4-202ENST00000396914 ZMYND12Q9H0C1 365 aa33.69■■■□□ 2.98
CHCHD4-202ENST00000396914 EHMT1Q9H9B1 1298 aa33.69■■■□□ 2.98
CHCHD4-202ENST00000396914 PCDHA6Q9UN73 950 aa33.69■■■□□ 2.98
CHCHD4-202ENST00000396914 PCDHA8Q9Y5H6 950 aa33.69■■■□□ 2.98
CHCHD4-202ENST00000396914 ESYT2A0FGR8 921 aa33.68■■■□□ 2.98
CHCHD4-202ENST00000396914 XBP1P17861 261 aa33.68■■■□□ 2.98
CHCHD4-202ENST00000396914 TNFAIP2Q03169 654 aa33.68■■■□□ 2.98
CHCHD4-202ENST00000396914 SEPT14Q6ZU15 432 aa33.68■■■□□ 2.98
CHCHD4-202ENST00000396914 IL31RAQ8NI17 732 aa33.68■■■□□ 2.98
CHCHD4-202ENST00000396914 CRISPLD2Q9H0B8 497 aa33.68■■■□□ 2.98
CHCHD4-202ENST00000396914 TMEM260Q9NX78 707 aa33.68■■■□□ 2.98
CHCHD4-202ENST00000396914 LRRC37A2A6NM11 1700 aa33.67■■■□□ 2.98
CHCHD4-202ENST00000396914 TAPT1Q6NXT6 567 aa33.67■■■□□ 2.98
CHCHD4-202ENST00000396914 BICD2Q8TD16 824 aa33.67■■■□□ 2.98
CHCHD4-202ENST00000396914 SHISA4Q96DD7 197 aa33.67■■■□□ 2.98
CHCHD4-202ENST00000396914 ZFP91Q96JP5 570 aaPredicted RBP33.67■■■□□ 2.98
CHCHD4-202ENST00000396914 PGBD1Q96JS3 809 aa33.67■■■□□ 2.98
CHCHD4-202ENST00000396914 ALG1Q9BT22 464 aa33.67■■■□□ 2.98
CHCHD4-202ENST00000396914 XPNPEP3Q9NQH7 507 aa33.67■■■□□ 2.98
CHCHD4-202ENST00000396914 KIAA0100Q14667 2235 aaKnown RBP33.66■■■□□ 2.98
CHCHD4-202ENST00000396914 EIF3JO75822 258 aaKnown RBP33.66■■■□□ 2.98
CHCHD4-202ENST00000396914 JAKMIP3Q5VZ66 844 aa33.66■■■□□ 2.98
CHCHD4-202ENST00000396914 REXO1Q8N1G1 1221 aaKnown RBP33.66■■■□□ 2.98
CHCHD4-202ENST00000396914 TMX3Q96JJ7 454 aa33.66■■■□□ 2.98
CHCHD4-202ENST00000396914 C11orf97A0A1B0GVM6 126 aaPredicted RBP33.65■■■□□ 2.98
CHCHD4-202ENST00000396914 FOSP01100 380 aaPredicted RBP33.65■■■□□ 2.98
CHCHD4-202ENST00000396914 IQSEC1Q6DN90 963 aa33.65■■■□□ 2.98
CHCHD4-202ENST00000396914 VSIG10LQ86VR7 867 aa33.65■■■□□ 2.98
CHCHD4-202ENST00000396914 TEX2Q8IWB9 1127 aa33.65■■■□□ 2.98
CHCHD4-202ENST00000396914 LLPHQ9BRT6 129 aaKnown RBP33.65■■■□□ 2.98
CHCHD4-202ENST00000396914 WDR11Q9BZH6 1224 aa33.65■■■□□ 2.98
CHCHD4-202ENST00000396914 OGDHLQ9ULD0 1010 aa33.65■■■□□ 2.98
CHCHD4-202ENST00000396914 FOSBP53539 338 aa33.64■■■□□ 2.98
CHCHD4-202ENST00000396914 SCFD2Q8WU76 684 aa33.64■■■□□ 2.98
CHCHD4-202ENST00000396914 FDPSP14324 419 aaKnown RBP33.63■■■□□ 2.97
CHCHD4-202ENST00000396914 AP3B2Q13367 1082 aa33.63■■■□□ 2.97
CHCHD4-202ENST00000396914 ANO3Q9BYT9 981 aa33.63■■■□□ 2.97
CHCHD4-202ENST00000396914 KCNJ14Q9UNX9 436 aa33.63■■■□□ 2.97
CHCHD4-202ENST00000396914 BRCA2P51587 3418 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms