RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 PQBP1O60828 265 aaKnown RBP20.24■□□□□ 0.83
UPK3A-202ENST00000396082 POLR2MP0CAP2 368 aa20.24■□□□□ 0.83
UPK3A-202ENST00000396082 EIF2AK2P19525 551 aaKnown RBP20.24■□□□□ 0.83
UPK3A-202ENST00000396082 PTGS1P23219 599 aa20.24■□□□□ 0.83
UPK3A-202ENST00000396082 SMARCA1P28370 1054 aa20.24■□□□□ 0.83
UPK3A-202ENST00000396082 HOXA13P31271 388 aaPredicted RBP20.24■□□□□ 0.83
UPK3A-202ENST00000396082 HSPA4P34932 840 aa20.24■□□□□ 0.83
UPK3A-202ENST00000396082 MAGEA10P43363 369 aaPredicted RBP20.24■□□□□ 0.83
UPK3A-202ENST00000396082 HSD17B4P51659 736 aa20.24■□□□□ 0.83
UPK3A-202ENST00000396082 EXOSC10Q01780 885 aaKnown RBP20.24■□□□□ 0.83
UPK3A-202ENST00000396082 SAMD3Q8N6K7 520 aa20.24■□□□□ 0.83
UPK3A-202ENST00000396082 FANCBQ8NB91 859 aa20.24■□□□□ 0.83
UPK3A-202ENST00000396082 IWS1Q96ST2 819 aa20.24■□□□□ 0.83
UPK3A-202ENST00000396082 MAP3K20Q9NYL2 800 aaKnown RBP20.24■□□□□ 0.83
UPK3A-202ENST00000396082 NAP1L2Q9ULW6 460 aaPredicted RBP20.24■□□□□ 0.83
UPK3A-202ENST00000396082 OPLAHO14841 1288 aa20.23■□□□□ 0.83
UPK3A-202ENST00000396082 MDM2Q00987 491 aaPredicted RBP20.23■□□□□ 0.83
UPK3A-202ENST00000396082 TLE2Q04725 743 aa20.23■□□□□ 0.83
UPK3A-202ENST00000396082 TTLL4Q14679 1199 aa20.23■□□□□ 0.83
UPK3A-202ENST00000396082 STXBP2Q15833 593 aa20.23■□□□□ 0.83
UPK3A-202ENST00000396082 TMEM63BQ5T3F8 832 aa20.23■□□□□ 0.83
UPK3A-202ENST00000396082 BLOC1S2Q6QNY1 142 aa20.23■□□□□ 0.83
UPK3A-202ENST00000396082 CMTR1Q8N1G2 835 aaKnown RBP20.23■□□□□ 0.83
UPK3A-202ENST00000396082 OR6J1Q8NGC5 347 aa20.23■□□□□ 0.83
UPK3A-202ENST00000396082 GDF15Q99988 308 aa20.23■□□□□ 0.83
UPK3A-202ENST00000396082 PXMP2Q9NR77 195 aa20.23■□□□□ 0.83
UPK3A-202ENST00000396082 PCDH10Q9P2E7 1040 aa20.23■□□□□ 0.83
UPK3A-202ENST00000396082 SNX14Q9Y5W7 946 aa20.23■□□□□ 0.83
UPK3A-202ENST00000396082 ELP1O95163 1332 aa20.23■□□□□ 0.83
UPK3A-202ENST00000396082 RBM47A0AV96 593 aaKnown RBP20.22■□□□□ 0.83
UPK3A-202ENST00000396082 NKRFO15226 690 aaKnown RBP eCLIP20.22■□□□□ 0.83
UPK3A-202ENST00000396082 CTAGE5O15320 804 aa20.22■□□□□ 0.83
UPK3A-202ENST00000396082 ZBTB43O43298 467 aa20.22■□□□□ 0.83
UPK3A-202ENST00000396082 TXNP10599 105 aaKnown RBP20.22■□□□□ 0.83
UPK3A-202ENST00000396082 NKX3-2P78367 333 aa20.22■□□□□ 0.83
UPK3A-202ENST00000396082 GHRHRQ02643 423 aa20.22■□□□□ 0.83
UPK3A-202ENST00000396082 APOA5Q6Q788 366 aa20.22■□□□□ 0.83
UPK3A-202ENST00000396082 CXCL17Q6UXB2 119 aa20.22■□□□□ 0.83
UPK3A-202ENST00000396082 SEPT14Q6ZU15 432 aa20.22■□□□□ 0.83
UPK3A-202ENST00000396082 FCHSD1Q86WN1 690 aa20.22■□□□□ 0.83
UPK3A-202ENST00000396082 CCDC82Q8N4S0 544 aa20.22■□□□□ 0.83
UPK3A-202ENST00000396082 SRBD1Q8N5C6 995 aaKnown RBP20.22■□□□□ 0.83
UPK3A-202ENST00000396082 UBE2OQ9C0C9 1292 aaKnown RBP20.22■□□□□ 0.83
UPK3A-202ENST00000396082 RBM28Q9NW13 759 aaKnown RBP20.22■□□□□ 0.83
UPK3A-202ENST00000396082 A0A0U1RQG5 324 aaPredicted RBP20.21■□□□□ 0.83
UPK3A-202ENST00000396082 KLF18A0A0U1RQI7 1052 aa20.21■□□□□ 0.83
UPK3A-202ENST00000396082 DCDC2CA8MYV0 355 aa20.21■□□□□ 0.83
UPK3A-202ENST00000396082 CLTBP09497 229 aa20.21■□□□□ 0.83
UPK3A-202ENST00000396082 CPT1AP50416 773 aa20.21■□□□□ 0.83
UPK3A-202ENST00000396082 RTN1Q16799 776 aa20.21■□□□□ 0.83
UPK3A-202ENST00000396082 BRDTQ58F21 947 aaPredicted RBP20.21■□□□□ 0.83
UPK3A-202ENST00000396082 TMTC3Q6ZXV5 915 aa20.21■□□□□ 0.83
UPK3A-202ENST00000396082 KCNB2Q92953 911 aa20.21■□□□□ 0.83
UPK3A-202ENST00000396082 PRO3102Q9H379 93 aa20.21■□□□□ 0.83
UPK3A-202ENST00000396082 PDLIM7Q9NR12 457 aa20.21■□□□□ 0.83
UPK3A-202ENST00000396082 KIAA1217Q5T5P2 1943 aa20.21■□□□□ 0.83
UPK3A-202ENST00000396082 MROH7Q68CQ1 1323 aa20.21■□□□□ 0.83
UPK3A-202ENST00000396082 A0A1W2PPC1 479 aa20.2■□□□□ 0.82
UPK3A-202ENST00000396082 GOLGA8AA7E2F4 631 aa20.2■□□□□ 0.82
UPK3A-202ENST00000396082 GOLGA8BA8MQT2 603 aa20.2■□□□□ 0.82
UPK3A-202ENST00000396082 CABYRO75952 493 aa20.2■□□□□ 0.82
UPK3A-202ENST00000396082 NR3C2P08235 984 aa20.2■□□□□ 0.82
UPK3A-202ENST00000396082 MYCLP12524 364 aaPredicted RBP20.2■□□□□ 0.82
UPK3A-202ENST00000396082 CPA1P15085 419 aa20.2■□□□□ 0.82
UPK3A-202ENST00000396082 PSMA5P28066 241 aa20.2■□□□□ 0.82
UPK3A-202ENST00000396082 BMP8BP34820 402 aa20.2■□□□□ 0.82
UPK3A-202ENST00000396082 CUL5Q93034 780 aa20.2■□□□□ 0.82
UPK3A-202ENST00000396082 TRIOBPQ9H2D6 2365 aa20.2■□□□□ 0.82
UPK3A-202ENST00000396082 LTBP2Q14767 1821 aa20.19■□□□□ 0.82
UPK3A-202ENST00000396082 EPB41L2O43491 1005 aaKnown RBP20.19■□□□□ 0.82
UPK3A-202ENST00000396082 Q6ZUG5 572 aa20.19■□□□□ 0.82
UPK3A-202ENST00000396082 SMARCC2Q8TAQ2 1214 aa20.19■□□□□ 0.82
UPK3A-202ENST00000396082 COPS5Q92905 334 aa20.19■□□□□ 0.82
UPK3A-202ENST00000396082 PDCD2LQ9BRP1 358 aa20.19■□□□□ 0.82
UPK3A-202ENST00000396082 TMEM39AQ9NV64 488 aa20.19■□□□□ 0.82
UPK3A-202ENST00000396082 POLR3EQ9NVU0 708 aa20.19■□□□□ 0.82
UPK3A-202ENST00000396082 BRPF3Q9ULD4 1205 aa20.19■□□□□ 0.82
UPK3A-202ENST00000396082 hCG_1642624A0A1W2PR95 340 aa20.18■□□□□ 0.82
UPK3A-202ENST00000396082 ARVCFO00192 962 aa20.18■□□□□ 0.82
UPK3A-202ENST00000396082 EIF3JO75822 258 aaKnown RBP20.18■□□□□ 0.82
UPK3A-202ENST00000396082 MYL3P08590 195 aa20.18■□□□□ 0.82
UPK3A-202ENST00000396082 CASTP20810 708 aaKnown RBP20.18■□□□□ 0.82
UPK3A-202ENST00000396082 PGM5Q15124 567 aa20.18■□□□□ 0.82
UPK3A-202ENST00000396082 ANKRD33Q7Z3H0 272 aa20.18■□□□□ 0.82
UPK3A-202ENST00000396082 SH3RF1Q7Z6J0 888 aa20.18■□□□□ 0.82
UPK3A-202ENST00000396082 TOX2Q96NM4 488 aa20.18■□□□□ 0.82
UPK3A-202ENST00000396082 MRVI1Q9Y6F6 885 aa20.18■□□□□ 0.82
UPK3A-202ENST00000396082 TLR3O15455 904 aaKnown RBP20.17■□□□□ 0.82
UPK3A-202ENST00000396082 ARIH2O95376 493 aa20.17■□□□□ 0.82
UPK3A-202ENST00000396082 RPS6KB1P23443 525 aa20.17■□□□□ 0.82
UPK3A-202ENST00000396082 CCND2P30279 289 aa20.17■□□□□ 0.82
UPK3A-202ENST00000396082 HEATR3Q7Z4Q2 680 aa20.17■□□□□ 0.82
UPK3A-202ENST00000396082 BRF1Q92994 677 aa20.17■□□□□ 0.82
UPK3A-202ENST00000396082 TRIM43BA6NCK2 446 aa20.16■□□□□ 0.82
UPK3A-202ENST00000396082 GH1P01241 217 aa20.16■□□□□ 0.82
UPK3A-202ENST00000396082 RAG1P15918 1043 aa20.16■□□□□ 0.82
UPK3A-202ENST00000396082 METAP2P50579 478 aaKnown RBP eCLIP20.16■□□□□ 0.82
UPK3A-202ENST00000396082 FXR1P51114 621 aaKnown RBP eCLIP20.16■□□□□ 0.82
UPK3A-202ENST00000396082 APOBRQ0VD83 1088 aa20.16■□□□□ 0.82
UPK3A-202ENST00000396082 ITGA7Q13683 1181 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms