RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 TXNP10599 105 aaKnown RBP15.95■□□□□ 0.14
CXCL12-205ENST00000395794 TROAPQ12815 778 aa15.95■□□□□ 0.14
CXCL12-205ENST00000395794 TTLL4Q14679 1199 aa15.95■□□□□ 0.14
CXCL12-205ENST00000395794 STXBP2Q15833 593 aa15.95■□□□□ 0.14
CXCL12-205ENST00000395794 CREB3L3Q68CJ9 461 aa15.95■□□□□ 0.14
CXCL12-205ENST00000395794 IGDCC4Q8TDY8 1250 aa15.95■□□□□ 0.14
CXCL12-205ENST00000395794 TBC1D5Q92609 795 aa15.95■□□□□ 0.14
CXCL12-205ENST00000395794 TMEM87BQ96K49 555 aa15.95■□□□□ 0.14
CXCL12-205ENST00000395794 TAAR1Q96RJ0 339 aa15.95■□□□□ 0.14
CXCL12-205ENST00000395794 MAP3K20Q9NYL2 800 aaKnown RBP15.95■□□□□ 0.14
CXCL12-205ENST00000395794 KPNA6O60684 536 aa15.94■□□□□ 0.14
CXCL12-205ENST00000395794 CDC45O75419 566 aa15.94■□□□□ 0.14
CXCL12-205ENST00000395794 DDAH1O94760 285 aa15.94■□□□□ 0.14
CXCL12-205ENST00000395794 ANTXR2P58335 489 aa15.94■□□□□ 0.14
CXCL12-205ENST00000395794 FPGSQ05932 587 aa15.94■□□□□ 0.14
CXCL12-205ENST00000395794 ITGA7Q13683 1181 aa15.94■□□□□ 0.14
CXCL12-205ENST00000395794 TMEM63BQ5T3F8 832 aa15.94■□□□□ 0.14
CXCL12-205ENST00000395794 SAMD3Q8N6K7 520 aa15.94■□□□□ 0.14
CXCL12-205ENST00000395794 MTMR8Q96EF0 704 aa15.94■□□□□ 0.14
CXCL12-205ENST00000395794 PIGSQ96S52 555 aa15.94■□□□□ 0.14
CXCL12-205ENST00000395794 MAP3K14Q99558 947 aa15.94■□□□□ 0.14
CXCL12-205ENST00000395794 RIOX1Q9H6W3 641 aa15.94■□□□□ 0.14
CXCL12-205ENST00000395794 SENP2Q9HC62 589 aa15.94■□□□□ 0.14
CXCL12-205ENST00000395794 MCM3APO60318 1980 aa15.94■□□□□ 0.14
CXCL12-205ENST00000395794 PNMA6FA0A0J9YX94 578 aa15.93■□□□□ 0.14
CXCL12-205ENST00000395794 TIMP1P01033 207 aa15.93■□□□□ 0.14
CXCL12-205ENST00000395794 MYL3P08590 195 aa15.93■□□□□ 0.14
CXCL12-205ENST00000395794 PTGS1P23219 599 aa15.93■□□□□ 0.14
CXCL12-205ENST00000395794 GNAQP50148 359 aa15.93■□□□□ 0.14
CXCL12-205ENST00000395794 NECTIN1Q15223 517 aa15.93■□□□□ 0.14
CXCL12-205ENST00000395794 SHHQ15465 462 aa15.93■□□□□ 0.14
CXCL12-205ENST00000395794 SEPT14Q6ZU15 432 aa15.93■□□□□ 0.14
CXCL12-205ENST00000395794 SKAP1Q86WV1 359 aa15.93■□□□□ 0.14
CXCL12-205ENST00000395794 ZNF654Q8IZM8 581 aa15.93■□□□□ 0.14
CXCL12-205ENST00000395794 LZTS2Q9BRK4 669 aa15.93■□□□□ 0.14
CXCL12-205ENST00000395794 LY9Q9HBG7 655 aa15.93■□□□□ 0.14
CXCL12-205ENST00000395794 GCOM1H8Y6P7 765 aaPredicted RBP15.92■□□□□ 0.14
CXCL12-205ENST00000395794 EIF3JO75822 258 aaKnown RBP15.92■□□□□ 0.14
CXCL12-205ENST00000395794 POLR2MP0CAP2 368 aa15.92■□□□□ 0.14
CXCL12-205ENST00000395794 CALM1P0DP23 149 aa15.92■□□□□ 0.14
CXCL12-205ENST00000395794 CALM2P0DP24 149 aa15.92■□□□□ 0.14
CXCL12-205ENST00000395794 CALM3P0DP25 149 aa15.92■□□□□ 0.14
CXCL12-205ENST00000395794 EIF2AK2P19525 551 aaKnown RBP15.92■□□□□ 0.14
CXCL12-205ENST00000395794 ITGB8P26012 769 aa15.92■□□□□ 0.14
CXCL12-205ENST00000395794 HSD17B4P51659 736 aa15.92■□□□□ 0.14
CXCL12-205ENST00000395794 SYNE3Q6ZMZ3 975 aa15.92■□□□□ 0.14
CXCL12-205ENST00000395794 FAM126BQ8IXS8 530 aa15.92■□□□□ 0.14
CXCL12-205ENST00000395794 TMEM199Q8N511 208 aa15.92■□□□□ 0.14
CXCL12-205ENST00000395794 RRP36Q96EU6 259 aaKnown RBP15.92■□□□□ 0.14
CXCL12-205ENST00000395794 MTG1Q9BT17 334 aaPredicted RBP15.92■□□□□ 0.14
CXCL12-205ENST00000395794 PXMP2Q9NR77 195 aa15.92■□□□□ 0.14
CXCL12-205ENST00000395794 COL20A1Q9P218 1284 aa15.92■□□□□ 0.14
CXCL12-205ENST00000395794 SEC63Q9UGP8 760 aaKnown RBP15.92■□□□□ 0.14
CXCL12-205ENST00000395794 TBX21Q9UL17 535 aa15.92■□□□□ 0.14
CXCL12-205ENST00000395794 SLC12A7Q9Y666 1083 aa15.92■□□□□ 0.14
CXCL12-205ENST00000395794 SH2B2O14492 632 aaPredicted RBP15.91■□□□□ 0.14
CXCL12-205ENST00000395794 PPP1R11O60927 126 aaPredicted RBP15.91■□□□□ 0.14
CXCL12-205ENST00000395794 NR3C2P08235 984 aa15.91■□□□□ 0.14
CXCL12-205ENST00000395794 LIFRP42702 1097 aa15.91■□□□□ 0.14
CXCL12-205ENST00000395794 PSMC6P62333 389 aa15.91■□□□□ 0.14
CXCL12-205ENST00000395794 PPIGQ13427 754 aaKnown RBP eCLIP15.91■□□□□ 0.14
CXCL12-205ENST00000395794 MFSD5Q6N075 450 aa15.91■□□□□ 0.14
CXCL12-205ENST00000395794 DEFB123Q8N688 67 aa15.91■□□□□ 0.14
CXCL12-205ENST00000395794 SLC43A3Q8NBI5 491 aa15.91■□□□□ 0.14
CXCL12-205ENST00000395794 PIBF1Q8WXW3 757 aa15.91■□□□□ 0.14
CXCL12-205ENST00000395794 MYL10Q9BUA6 226 aa15.91■□□□□ 0.14
CXCL12-205ENST00000395794 LRRC37A2A6NM11 1700 aa15.91■□□□□ 0.14
CXCL12-205ENST00000395794 CYTH3O43739 400 aa15.9■□□□□ 0.14
CXCL12-205ENST00000395794 GH1P01241 217 aa15.9■□□□□ 0.14
CXCL12-205ENST00000395794 CD4P01730 458 aa15.9■□□□□ 0.14
CXCL12-205ENST00000395794 SUPT20HL2P0C7V6 817 aa15.9■□□□□ 0.14
CXCL12-205ENST00000395794 MYCLP12524 364 aaPredicted RBP15.9■□□□□ 0.14
CXCL12-205ENST00000395794 SMARCA1P28370 1054 aa15.9■□□□□ 0.14
CXCL12-205ENST00000395794 HOXA13P31271 388 aaPredicted RBP15.9■□□□□ 0.14
CXCL12-205ENST00000395794 PURAQ00577 322 aaKnown RBP15.9■□□□□ 0.14
CXCL12-205ENST00000395794 GHRHRQ02643 423 aa15.9■□□□□ 0.14
CXCL12-205ENST00000395794 C9orf50Q5SZB4 431 aa15.9■□□□□ 0.14
CXCL12-205ENST00000395794 RNPC3Q96LT9 517 aaKnown RBP15.9■□□□□ 0.14
CXCL12-205ENST00000395794 NEK1Q96PY6 1258 aa15.9■□□□□ 0.14
CXCL12-205ENST00000395794 SPZ1Q9BXG8 430 aa15.9■□□□□ 0.14
CXCL12-205ENST00000395794 PPP1R12CQ9BZL4 782 aa15.9■□□□□ 0.14
CXCL12-205ENST00000395794 FOXD4L1Q9NU39 408 aa15.9■□□□□ 0.14
CXCL12-205ENST00000395794 MRVI1Q9Y6F6 885 aa15.9■□□□□ 0.14
CXCL12-205ENST00000395794 A6NJR5 290 aa15.89■□□□□ 0.13
CXCL12-205ENST00000395794 OPLAHO14841 1288 aa15.89■□□□□ 0.13
CXCL12-205ENST00000395794 KRT32Q14532 448 aa15.89■□□□□ 0.13
CXCL12-205ENST00000395794 LY6KQ17RY6 165 aa15.89■□□□□ 0.13
CXCL12-205ENST00000395794 FAM47CQ5HY64 1035 aa15.89■□□□□ 0.13
CXCL12-205ENST00000395794 KCNV1Q6PIU1 500 aa15.89■□□□□ 0.13
CXCL12-205ENST00000395794 FCHSD1Q86WN1 690 aa15.89■□□□□ 0.13
CXCL12-205ENST00000395794 COPS5Q92905 334 aa15.89■□□□□ 0.13
CXCL12-205ENST00000395794 CUL5Q93034 780 aa15.89■□□□□ 0.13
CXCL12-205ENST00000395794 HIPK3Q9H422 1215 aa15.89■□□□□ 0.13
CXCL12-205ENST00000395794 LCTP09848 1927 aa15.89■□□□□ 0.13
CXCL12-205ENST00000395794 GRIN2DO15399 1336 aa15.89■□□□□ 0.13
CXCL12-205ENST00000395794 LTBP2Q14767 1821 aa15.89■□□□□ 0.13
CXCL12-205ENST00000395794 ARIH2O95376 493 aa15.88■□□□□ 0.13
CXCL12-205ENST00000395794 CCND2P30279 289 aa15.88■□□□□ 0.13
CXCL12-205ENST00000395794 CHMP4BP1P59074 171 aa15.88■□□□□ 0.13
CXCL12-205ENST00000395794 SLC35G1Q2M3R5 365 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms