RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 NRDCO43847 1150 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 TRIM14Q14142 442 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 PPP1R18Q6NYC8 613 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 TATDN1Q6P1N9 297 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 CYP26C1Q6V0L0 522 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 RAD54LQ92698 747 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 MKL1Q969V6 931 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 LENG9Q96B70 501 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 CNOT6LQ96LI5 555 aaKnown RBP17.24■□□□□ 0.35
CPSF7-202ENST00000394888 ERGIC2Q96RQ1 377 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 SLF1Q9BQI6 1058 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 PARD6BQ9BYG5 372 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 ADCY7P51828 1080 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 CACNB3P54284 484 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 PDE4DQ08499 809 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 PDIA5Q14554 519 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 KCTD1Q719H9 257 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 QTRT2Q9H974 415 aaKnown RBP17.24■□□□□ 0.35
CPSF7-202ENST00000394888 KCNMB3Q9NPA1 279 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 GLIPR1L2Q4G1C9 344 aa17.23■□□□□ 0.35
CPSF7-202ENST00000394888 DACT2Q5SW24 774 aa17.23■□□□□ 0.35
CPSF7-202ENST00000394888 CCDC12Q8WUD4 166 aaPredicted RBP17.23■□□□□ 0.35
CPSF7-202ENST00000394888 LACRTQ9GZZ8 138 aa17.23■□□□□ 0.35
CPSF7-202ENST00000394888 MEIS2O14770 477 aa17.23■□□□□ 0.35
CPSF7-202ENST00000394888 CALCRLQ16602 461 aa17.23■□□□□ 0.35
CPSF7-202ENST00000394888 C7orf43Q8WVR3 580 aa17.23■□□□□ 0.35
CPSF7-202ENST00000394888 NPR1P16066 1061 aa17.23■□□□□ 0.35
CPSF7-202ENST00000394888 TAL1P17542 331 aaPredicted RBP17.23■□□□□ 0.35
CPSF7-202ENST00000394888 HNRNPH3P31942 346 aaKnown RBP17.23■□□□□ 0.35
CPSF7-202ENST00000394888 FILIP1LQ4L180 1135 aa17.23■□□□□ 0.35
CPSF7-202ENST00000394888 KRT27Q7Z3Y8 459 aa17.23■□□□□ 0.35
CPSF7-202ENST00000394888 SLF2Q8IX21 1173 aa17.23■□□□□ 0.35
CPSF7-202ENST00000394888 MSANTD4Q8NCY6 345 aa17.23■□□□□ 0.35
CPSF7-202ENST00000394888 FUT8Q9BYC5 575 aa17.23■□□□□ 0.35
CPSF7-202ENST00000394888 SLC39A2Q9NP94 309 aa17.23■□□□□ 0.35
CPSF7-202ENST00000394888 SWAP70Q9UH65 585 aa17.23■□□□□ 0.35
CPSF7-202ENST00000394888 PLEKP08567 350 aaPredicted RBP17.22■□□□□ 0.35
CPSF7-202ENST00000394888 CDC23Q9UJX2 597 aa17.22■□□□□ 0.35
CPSF7-202ENST00000394888 RAB21Q9UL25 225 aa17.22■□□□□ 0.35
CPSF7-202ENST00000394888 UNC13DQ70J99 1090 aa17.22■□□□□ 0.35
CPSF7-202ENST00000394888 CSGALNACT2Q8N6G5 542 aa17.22■□□□□ 0.35
CPSF7-202ENST00000394888 SEC63Q9UGP8 760 aaKnown RBP17.22■□□□□ 0.35
CPSF7-202ENST00000394888 DUSP10Q9Y6W6 482 aa17.22■□□□□ 0.35
CPSF7-202ENST00000394888 CRKP46108 304 aa17.22■□□□□ 0.35
CPSF7-202ENST00000394888 FIGNQ5HY92 759 aa17.22■□□□□ 0.35
CPSF7-202ENST00000394888 ZNF569Q5MCW4 686 aa17.22■□□□□ 0.35
CPSF7-202ENST00000394888 TRAPPC11Q7Z392 1133 aa17.22■□□□□ 0.35
CPSF7-202ENST00000394888 SRGAP1Q7Z6B7 1085 aa17.22■□□□□ 0.35
CPSF7-202ENST00000394888 ZC3H3Q8IXZ2 948 aaKnown RBP17.22■□□□□ 0.35
CPSF7-202ENST00000394888 RABGGTAQ92696 567 aa17.22■□□□□ 0.35
CPSF7-202ENST00000394888 NUP88Q99567 741 aaPredicted RBP17.22■□□□□ 0.35
CPSF7-202ENST00000394888 EPN1Q9Y6I3 576 aaPredicted RBP17.22■□□□□ 0.35
CPSF7-202ENST00000394888 COL2A1P02458 1487 aaPredicted RBP17.21■□□□□ 0.35
CPSF7-202ENST00000394888 ZBTB5O15062 677 aa17.21■□□□□ 0.35
CPSF7-202ENST00000394888 GPR161Q8N6U8 529 aaKnown RBP17.21■□□□□ 0.35
CPSF7-202ENST00000394888 IDI2Q9BXS1 227 aa17.21■□□□□ 0.35
CPSF7-202ENST00000394888 EXOC1Q9NV70 894 aa17.21■□□□□ 0.35
CPSF7-202ENST00000394888 CYP3A7-CYP3A51PA0A087WV96 503 aa17.21■□□□□ 0.35
CPSF7-202ENST00000394888 A0A1W2PQJ5 194 aa17.21■□□□□ 0.35
CPSF7-202ENST00000394888 PSMD14O00487 310 aa17.21■□□□□ 0.35
CPSF7-202ENST00000394888 CYP3A7P24462 503 aa17.21■□□□□ 0.35
CPSF7-202ENST00000394888 BAP1Q92560 729 aa17.21■□□□□ 0.35
CPSF7-202ENST00000394888 LARP4BQ92615 738 aaKnown RBP17.21■□□□□ 0.35
CPSF7-202ENST00000394888 TRIM47Q96LD4 638 aa17.21■□□□□ 0.35
CPSF7-202ENST00000394888 STK17AQ9UEE5 414 aa17.21■□□□□ 0.35
CPSF7-202ENST00000394888 ATRNL1Q5VV63 1379 aa17.21■□□□□ 0.35
CPSF7-202ENST00000394888 WDR81Q562E7 1941 aa17.21■□□□□ 0.35
CPSF7-202ENST00000394888 PSMA7O14818 248 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 DNM2P50570 870 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 KCNMA1Q12791 1236 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 TERF2Q15554 542 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 ARSHQ5FYA8 562 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 OR8K1Q8NGG5 319 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 ETNPPLQ8TBG4 499 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 LCA5LO95447 670 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 ASTE1Q2TB18 679 aaPredicted RBP17.2■□□□□ 0.34
CPSF7-202ENST00000394888 KIAA1755Q5JYT7 1200 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 KRT222Q8N1A0 295 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 DBNDD1Q9H9R9 158 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 LRWD1Q9UFC0 647 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 PVALEFA0A1B0GWK0 134 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 FRMD3A2A2Y4 597 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 MAP2K7O14733 419 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 ASIC1P78348 528 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 NOA1Q8NC60 698 aaKnown RBP17.2■□□□□ 0.34
CPSF7-202ENST00000394888 MRIQ9BWK5 157 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 ARHGAP20Q9P2F6 1191 aa17.2■□□□□ 0.34
CPSF7-202ENST00000394888 HOXD13P35453 343 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 FOXR2Q6PJQ5 311 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 NOC3LQ8WTT2 800 aaKnown RBP17.19■□□□□ 0.34
CPSF7-202ENST00000394888 UBXN4Q92575 508 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 DDX12PQ92771 950 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 HDAC6Q9UBN7 1215 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 NOL4O94818 638 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 POLD1P28340 1107 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 CDK17Q00537 523 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 CCDC155Q8N6L0 562 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 BCAS3Q9H6U6 928 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 USP17L15C9J2P7 530 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 USP17L13C9JLJ4 530 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms