RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 PPP1R3GB7ZBB8 358 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 RPN1P04843 607 aaKnown RBP21.46■■□□□ 1.03
CLDND1-203ENST00000394181 DHX8Q14562 1220 aaKnown RBP21.46■■□□□ 1.03
CLDND1-203ENST00000394181 ECM1Q16610 540 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 TMEM266Q2M3C6 531 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 KLHL10Q6JEL2 608 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 LPAR1Q92633 364 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 LENG9Q96B70 501 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 KLRG1Q96E93 195 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 SLF1Q9BQI6 1058 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 KCNMB3Q9NPA1 279 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 IFNKQ9P0W0 207 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 PCDHA12Q9UN75 941 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 ZHX2Q9Y6X8 837 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 MARCH6O60337 910 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 PTGS1P23219 599 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 PDIA5Q14554 519 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 CCDC144BQ3MJ40 725 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 PRPF38AQ8NAV1 312 aaKnown RBP21.46■■□□□ 1.03
CLDND1-203ENST00000394181 MRFAP1L1Q96HT8 127 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 KCNF1Q9H3M0 494 aa21.46■■□□□ 1.03
CLDND1-203ENST00000394181 FOSP01100 380 aaPredicted RBP21.45■■□□□ 1.02
CLDND1-203ENST00000394181 STAT3P40763 770 aa21.45■■□□□ 1.02
CLDND1-203ENST00000394181 STX17P56962 302 aa21.45■■□□□ 1.02
CLDND1-203ENST00000394181 UBXN2AP68543 259 aa21.45■■□□□ 1.02
CLDND1-203ENST00000394181 CCDC186Q7Z3E2 898 aa21.45■■□□□ 1.02
CLDND1-203ENST00000394181 CPXCR1Q8N123 301 aa21.45■■□□□ 1.02
CLDND1-203ENST00000394181 ZFP91Q96JP5 570 aaPredicted RBP21.45■■□□□ 1.02
CLDND1-203ENST00000394181 XPO4Q9C0E2 1151 aaKnown RBP21.45■■□□□ 1.02
CLDND1-203ENST00000394181 RPAP3Q9H6T3 665 aaPredicted RBP21.45■■□□□ 1.02
CLDND1-203ENST00000394181 GINM1Q9NU53 330 aa21.45■■□□□ 1.02
CLDND1-203ENST00000394181 FLOT1O75955 427 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 KCNK18Q7Z418 384 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 WNK4Q96J92 1243 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 PICK1Q9NRD5 415 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 BLOC1S4Q9NUP1 217 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 CCPG1Q9ULG6 757 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 POLR2AP24928 1970 aaKnown RBP21.44■■□□□ 1.02
CLDND1-203ENST00000394181 ADM5C9JUS6 153 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 GCOM1H8Y6P7 765 aaPredicted RBP21.44■■□□□ 1.02
CLDND1-203ENST00000394181 KLRC4O43908 158 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 POLR2MP0CAP2 368 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 BACE1P56817 501 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 FANCCQ00597 558 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 ZNF280CQ8ND82 737 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 ETNPPLQ8TBG4 499 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 SNX29Q8TEQ0 813 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 HOOK2Q96ED9 719 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 WDR18Q9BV38 432 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 RAVER2Q9HCJ3 691 aaKnown RBP21.44■■□□□ 1.02
CLDND1-203ENST00000394181 ADARB2Q9NS39 739 aaKnown RBP21.44■■□□□ 1.02
CLDND1-203ENST00000394181 MAPK8IP1Q9UQF2 711 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 GDAQ9Y2T3 454 aa21.44■■□□□ 1.02
CLDND1-203ENST00000394181 MRPL11Q9Y3B7 192 aaKnown RBP21.44■■□□□ 1.02
CLDND1-203ENST00000394181 ICAM1P05362 532 aa21.43■■□□□ 1.02
CLDND1-203ENST00000394181 SLC30A10Q6XR72 485 aa21.43■■□□□ 1.02
CLDND1-203ENST00000394181 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.43■■□□□ 1.02
CLDND1-203ENST00000394181 CALML4Q96GE6 196 aa21.43■■□□□ 1.02
CLDND1-203ENST00000394181 NFE2L3Q9Y4A8 694 aa21.43■■□□□ 1.02
CLDND1-203ENST00000394181 USP2O75604 605 aaPredicted RBP21.43■■□□□ 1.02
CLDND1-203ENST00000394181 CDC25BP30305 580 aa21.43■■□□□ 1.02
CLDND1-203ENST00000394181 HMGCS2P54868 508 aa21.43■■□□□ 1.02
CLDND1-203ENST00000394181 ENOX1Q8TC92 643 aaKnown RBP21.43■■□□□ 1.02
CLDND1-203ENST00000394181 SAMSN1Q9NSI8 373 aaKnown RBP21.43■■□□□ 1.02
CLDND1-203ENST00000394181 DACH1Q9UI36 760 aa21.43■■□□□ 1.02
CLDND1-203ENST00000394181 NFIBO00712 420 aa21.42■■□□□ 1.02
CLDND1-203ENST00000394181 TPM4P67936 248 aa21.42■■□□□ 1.02
CLDND1-203ENST00000394181 MCM6Q14566 821 aa21.42■■□□□ 1.02
CLDND1-203ENST00000394181 PTPN21Q16825 1174 aa21.42■■□□□ 1.02
CLDND1-203ENST00000394181 KMT5BQ4FZB7 885 aa21.42■■□□□ 1.02
CLDND1-203ENST00000394181 Q4G0T1 1027 aa21.42■■□□□ 1.02
CLDND1-203ENST00000394181 NAP1L4Q99733 375 aaKnown RBP21.42■■□□□ 1.02
CLDND1-203ENST00000394181 MSNP26038 577 aaKnown RBP21.41■■□□□ 1.02
CLDND1-203ENST00000394181 ARID5BQ14865 1188 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 KRT79Q5XKE5 535 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 MCTP2Q6DN12 878 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 MOXD1Q6UVY6 613 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 CLEC4DQ8WXI8 215 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 NAP1L5Q96NT1 182 aaPredicted RBP21.41■■□□□ 1.02
CLDND1-203ENST00000394181 RAB34Q9BZG1 259 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 SLC38A10Q9HBR0 1119 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 HOMER2Q9NSB8 354 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 PPP1R9AQ9ULJ8 1098 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 MSH4O15457 936 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 ERCC5P28715 1186 aaPredicted RBP21.41■■□□□ 1.02
CLDND1-203ENST00000394181 CIITAP33076 1130 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 TRAF1Q13077 416 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 ILDR2Q71H61 639 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 TRIM9Q9C026 710 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 CUEDC2Q9H467 287 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 COL20A1Q9P218 1284 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 PPP2R3BQ9Y5P8 575 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 ABCB11O95342 1321 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 DOCK1Q14185 1865 aa21.41■■□□□ 1.02
CLDND1-203ENST00000394181 CYP3A4P08684 503 aa21.4■■□□□ 1.02
CLDND1-203ENST00000394181 SPIRE1Q08AE8 756 aa21.4■■□□□ 1.02
CLDND1-203ENST00000394181 LRMPQ12912 555 aa21.4■■□□□ 1.02
CLDND1-203ENST00000394181 SUPT20HL1Q3ZLR7 823 aa21.4■■□□□ 1.02
CLDND1-203ENST00000394181 MUM1L1Q5H9M0 696 aa21.4■■□□□ 1.02
CLDND1-203ENST00000394181 ZNF658Q5TYW1 1059 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms