RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 SHTN1A0MZ66 631 aa8.7□□□□□ -1.02
GAPVD1-207ENST00000394105 LCA5LO95447 670 aa8.7□□□□□ -1.02
GAPVD1-207ENST00000394105 ARL6IP4Q66PJ3 421 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-207ENST00000394105 GDAP1L1Q96MZ0 367 aa8.7□□□□□ -1.02
GAPVD1-207ENST00000394105 SYT11Q9BT88 431 aa8.7□□□□□ -1.02
GAPVD1-207ENST00000394105 KCNMB3Q9NPA1 279 aa8.7□□□□□ -1.02
GAPVD1-207ENST00000394105 SH3GLB2Q9NR46 395 aa8.7□□□□□ -1.02
GAPVD1-207ENST00000394105 CTNND2Q9UQB3 1225 aa8.7□□□□□ -1.02
GAPVD1-207ENST00000394105 RPN1P04843 607 aaKnown RBP8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 CCT6AP40227 531 aaKnown RBP8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 ZNF658Q5TYW1 1059 aaPredicted RBP8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 KRT26Q7Z3Y9 468 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 MSL3Q8N5Y2 521 aaKnown RBP8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 TBC1D5Q92609 795 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 PSD3Q9NYI0 1048 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 RWDD2AQ9UIY3 292 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 FRMPD2Q68DX3 1309 aaPredicted RBP8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 SYNRGQ9UMZ2 1314 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 CDKL5O76039 1030 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 HNRNPH3P31942 346 aaKnown RBP8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 AARSP49588 968 aaKnown RBP eCLIP8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 TRDNQ13061 729 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 HYIQ5T013 277 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 IGLV3-22A0A075B6J6 115 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 DGKZQ13574 1117 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 DACT2Q5SW24 774 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 SYNE3Q6ZMZ3 975 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 TMTC2Q8N394 836 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 COG1Q8WTW3 980 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 UIMC1Q96RL1 719 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 LEMD3Q9Y2U8 911 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 NPHP3-ACAD11A0A0J9YXS1 232 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 CCDC151A5D8V7 595 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 KLRF2D3W0D1 207 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 FAM86B1E9PN63 330 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 FAM86B2P0C5J1 330 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 GMLQ99445 158 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 SPATA31A6Q5VVP1 1343 aa8.69□□□□□ -1.02
GAPVD1-207ENST00000394105 PLSCR1O15162 318 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 RFC4P35249 363 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 KCNB1Q14721 858 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 CASP8Q14790 479 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 GPIHBP1Q8IV16 184 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 PRPHP41219 470 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 BYSLQ13895 437 aaKnown RBP8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 UBE2SQ16763 222 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 TTMPQ5BVD1 217 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 WDR93Q6P2C0 686 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 EPM2AIP1Q7L775 607 aaPredicted RBP8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 ADGRF4Q8IZF3 695 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 PLCD3Q8N3E9 789 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 CPLX3Q8WVH0 158 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 FERMT2Q96AC1 680 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 RTCBQ9Y3I0 505 aaKnown RBP8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 PPP2R5BQ15173 497 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 ZSCAN26Q16670 478 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 C7orf25Q9BPX7 421 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 CDC23Q9UJX2 597 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 HPCAL4Q9UM19 191 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 FNTAP49354 379 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 ZSWIM2Q8NEG5 633 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 TBCKQ8TEA7 893 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 GLIS2Q9BZE0 524 aaPredicted RBP8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 SIX2Q9NPC8 291 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 TAB2Q9NYJ8 693 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 VAV3Q9UKW4 847 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 ATP6V0A2Q9Y487 856 aa8.68□□□□□ -1.02
GAPVD1-207ENST00000394105 TP73O15350 636 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 SLC16A2P36021 539 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 TRAPPC10P48553 1259 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 MMP14P50281 582 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 COPB1P53618 953 aaKnown RBP8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 TEX35Q5T0J7 233 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 TPTE2Q6XPS3 522 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 UBAC1Q9BSL1 405 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 RBM28Q9NW13 759 aaKnown RBP8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 SSC5DA1L4H1 1573 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 TRIM37O94972 964 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 ZNF543Q08ER8 600 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 PAPD7Q5XG87 772 aaKnown RBP8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 LRRC47Q8N1G4 583 aaKnown RBP8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 RBM46Q8TBY0 533 aaKnown RBP8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 NGLY1Q96IV0 654 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 DOCK1Q14185 1865 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 PARP1P09874 1014 aaKnown RBP8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 TOP1P11387 765 aaKnown RBP8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 MCCD1P59942 119 aaPredicted RBP8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 SNAP25P60880 206 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 VPS16Q9H269 839 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 RNF41Q9H4P4 317 aaPredicted RBP8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 LAMA1P25391 3075 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 USP17L10C9JJH3 530 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 GTPBP6O43824 516 aaPredicted RBP8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 MED24O75448 989 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 FAM153BP0C7A2 387 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 SLC12A3P55017 1021 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 FAM153CQ494X1 144 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 CAVIN4Q5BKX8 364 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 MB21D1Q8N884 522 aa8.67□□□□□ -1.02
GAPVD1-207ENST00000394105 STRA6Q9BX79 667 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms