RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 FAM160B1Q5W0V3 765 aa13.52□□□□□ -0.25
CHD3-203ENST00000380358 USP17L12C9JPN9 530 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 USP17L21D6R901 530 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 ZNF827Q17R98 1081 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 WHAMMP3Q1A5X7 153 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 DEPDC1BQ8WUY9 529 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 ZMAT2Q96NC0 199 aaKnown RBP13.51□□□□□ -0.25
CHD3-203ENST00000380358 OCRLQ01968 901 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 G2E3Q7L622 706 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 NUP58Q9BVL2 599 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 ZWILCHQ9H900 591 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 GTPBP6O43824 516 aaPredicted RBP13.51□□□□□ -0.25
CHD3-203ENST00000380358 ALDH1L1O75891 902 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 SRGAP2BP0DMP2 458 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 LRRC4Q9HBW1 653 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 SMAP1Q8IYB5 467 aaPredicted RBP13.51□□□□□ -0.25
CHD3-203ENST00000380358 GOLGA5Q8TBA6 731 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 AFG1LQ8WV93 481 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 WDR64B1ANS9 1081 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 ZMYND10O75800 440 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 HSPD1P10809 573 aaKnown RBP13.51□□□□□ -0.25
CHD3-203ENST00000380358 PABPC4Q13310 644 aaKnown RBP eCLIP13.51□□□□□ -0.251e-6■■□□□ 13.3
CHD3-203ENST00000380358 CSRNP1Q96S65 589 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 TTC1Q99614 292 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 CAPN10Q9HC96 672 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 PFDN1O60925 122 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 ANP32DO95626 131 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 EEF1DP29692 281 aaKnown RBP13.51□□□□□ -0.25
CHD3-203ENST00000380358 CENPAP49450 140 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 B4GALNT2Q8NHY0 566 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 SH3KBP1Q96B97 665 aa13.51□□□□□ -0.25
CHD3-203ENST00000380358 HEXIM2Q96MH2 286 aaKnown RBP13.51□□□□□ -0.25
CHD3-203ENST00000380358 TRIM14Q14142 442 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 CYTH2Q99418 400 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 NRBP2Q9NSY0 501 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 CAPN11Q9UMQ6 739 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 MOCS3O95396 460 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 SLCO1A2P46721 670 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 OR6B2Q6IFH4 312 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 LINS1Q8NG48 757 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 ARHGEF11O15085 1522 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 ATP2B4P23634 1241 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 SSTR3P32745 418 aaPredicted RBP13.5□□□□□ -0.25
CHD3-203ENST00000380358 ART3Q13508 389 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 SBNO1A3KN83 1393 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 SUPT3HB4E1H0 165 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 MYL7Q01449 175 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 SF3B3Q15393 1217 aaKnown RBP13.5□□□□□ -0.25
CHD3-203ENST00000380358 CEP85Q6P2H3 762 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 RAD50Q92878 1312 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 HIP1RO75146 1068 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 MECOMQ03112 1051 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 ICA1Q05084 483 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 LBRQ14739 615 aaKnown RBP13.5□□□□□ -0.25
CHD3-203ENST00000380358 MARCH10Q8NA82 808 aaPredicted RBP13.5□□□□□ -0.25
CHD3-203ENST00000380358 ERBB3P21860 1342 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 ANKRD44Q8N8A2 993 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 CBX8Q9HC52 389 aa13.5□□□□□ -0.25
CHD3-203ENST00000380358 ARHGAP6O43182 974 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 KITP10721 976 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 TNFAIP1Q13829 316 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 MYOCDQ8IZQ8 938 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 OTUD7AQ8TE49 926 aaPredicted RBP13.49□□□□□ -0.25
CHD3-203ENST00000380358 ZBTB12Q9Y330 459 aaPredicted RBP13.49□□□□□ -0.25
CHD3-203ENST00000380358 MRPL11Q9Y3B7 192 aaKnown RBP13.49□□□□□ -0.25
CHD3-203ENST00000380358 NSFP46459 744 aaKnown RBP13.49□□□□□ -0.25
CHD3-203ENST00000380358 RASSF7Q02833 373 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 FLOT2Q14254 428 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 ARHGEF18Q6ZSZ5 1173 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 KDELC2Q7Z4H8 507 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.49□□□□□ -0.252e-6■■■■■ 54.9
CHD3-203ENST00000380358 KCNJ18B7U540 433 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 KCNJ12Q14500 433 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 LRRC41Q15345 812 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 MAP3K21Q5TCX8 1036 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 KRT80Q6KB66 452 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 DACH2Q96NX9 599 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 CREB3O43889 395 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 CHMLP26374 656 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 BTDP43251 543 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 TCP11X2Q5H9J9 407 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 ELMOD1Q8N336 334 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 GRK7Q8WTQ7 553 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 ZKSCAN5Q9Y2L8 839 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 MAP3K7O43318 606 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 WBP4O75554 376 aaKnown RBP13.49□□□□□ -0.25
CHD3-203ENST00000380358 GCP02774 474 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 SLMAPQ14BN4 828 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 PCGF5Q86SE9 256 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 MAIP1Q8WWC4 291 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 CASKIN1Q8WXD9 1431 aa13.49□□□□□ -0.25
CHD3-203ENST00000380358 CXCR5P32302 372 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 ZNF394Q53GI3 561 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 DCAF15Q66K64 600 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 ADALQ6DHV7 355 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 PHLDB3Q6NSJ2 640 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 CDC37L1Q7L3B6 337 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 SIX6OS1Q8N1H7 587 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 ZNF577Q9BSK1 485 aa13.48□□□□□ -0.25
CHD3-203ENST00000380358 TLK1Q9UKI8 766 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms