RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 CCDC25Q86WR0 208 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 AP1M1Q9BXS5 423 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 PCDHA12Q9UN75 941 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 L1RE1Q9UN81 338 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 OPA1O60313 960 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 KRT13P13646 458 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 SFMBT2Q5VUG0 894 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 BRIP1Q9BX63 1249 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 LIMA1Q9UHB6 759 aaKnown RBP15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 DMGDHQ9UI17 866 aaKnown RBP15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 PCDHA6Q9UN73 950 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 PCDHA8Q9Y5H6 950 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 CAMTA2O94983 1202 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 HEXIM1O94992 359 aaKnown RBP15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 RDXP35241 583 aaKnown RBP15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 IL17AQ16552 155 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 CDKAL1Q5VV42 579 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 GPBP1Q86WP2 473 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 MTRQ99707 1265 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 CAPS2Q9BXY5 557 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 ARHGAP23Q9P227 1491 aa15.91■□□□□ 0.14
TNFRSF1B-201ENST00000376259 CLIC2O15247 247 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 CDR1P51861 262 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 USP14P54578 494 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 GSTO1P78417 241 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 MYOCDQ8IZQ8 938 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 CEP95Q96GE4 821 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 BSDC1Q9NW68 430 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 CAPN6Q9Y6Q1 641 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 NPHP3-ACAD11A0A0J9YXS1 232 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 GOLGA6L7A0A1B0GV03 622 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 TRAPPC10P48553 1259 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 FEZ2Q9UHY8 353 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 USP17L15C9J2P7 530 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 USP17L13C9JLJ4 530 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 USP17L11C9JVI0 530 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 USP17L18D6R9N7 530 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 USP17L22D6RA61 530 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 USP17L17D6RBQ6 530 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 USP17L19D6RCP7 530 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 USP17L20D6RJB6 530 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 DDX39AO00148 427 aaKnown RBP15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 SLC1A4P43007 532 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 USP17L24Q0WX57 530 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 NFIXQ14938 502 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 ARHGAP44Q17R89 818 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 PRR16Q569H4 304 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 FAM26FQ5R3K3 315 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 USP17L6PQ6QN14 398 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 WDR66Q8TBY9 1149 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 DDX12PQ92771 950 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 TRIM9Q9C026 710 aa15.9■□□□□ 0.14
TNFRSF1B-201ENST00000376259 OVOS2A0A0G2JMS6 1433 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 RCCD1A6NED2 376 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 EIF3CLB5ME19 914 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 E9PMD0 336 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 TBCAO75347 108 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 KRT14P02533 472 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 CEP57Q86XR8 500 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 SYCP3Q8IZU3 236 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 SPICE1Q8N0Z3 855 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 EIF3CQ99613 913 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 PANK4Q9NVE7 773 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 ZSCAN5CA6NGD5 496 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 NTSR2O95665 410 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 CDK8P49336 464 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 TUBB2AQ13885 445 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 CFAP221Q4G0U5 840 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 TUBB2BQ9BVA1 445 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 E7EVH7 732 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 HERVK_113P62684 666 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 ADAM9Q13443 819 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 PDXDC2PQ6P474 469 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 CCDC84Q86UT8 332 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 SHISA4Q96DD7 197 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 SELENOSQ9BQE4 189 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 MED4Q9NPJ6 270 aa15.89■□□□□ 0.13
TNFRSF1B-201ENST00000376259 GLIS3Q8NEA6 775 aa15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 CTNNBL1Q8WYA6 563 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 DHTKD1Q96HY7 919 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 NYXQ9GZU5 481 aa15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 SETD1AO15047 1707 aaKnown RBP15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 INPP5BP32019 993 aa15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 STAT3P40763 770 aa15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 NKX1-1Q15270 411 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 ASIC2Q16515 512 aa15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 INTS5Q6P9B9 1019 aaKnown RBP15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 VPS36Q86VN1 386 aa15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 FNBP4Q8N3X1 1017 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 TSGA10Q9BZW7 698 aa15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 CAPN7Q9Y6W3 813 aa15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 TUBBP07437 444 aa15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 MYBL2P10244 700 aa15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 TTBK2Q6IQ55 1244 aa15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 ZNF512BQ96KM6 892 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF1B-201ENST00000376259 CETN3O15182 167 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 GCNT3O95395 438 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 ARHGAP25P42331 645 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 VWA3BQ502W6 1294 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms