RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 HPDP32754 393 aaPredicted RBP19.57■□□□□ 0.72
TRAF3IP1-201ENST00000373327 EHHADHQ08426 723 aa19.57■□□□□ 0.72
TRAF3IP1-201ENST00000373327 RNF187Q5TA31 235 aaPredicted RBP19.57■□□□□ 0.72
TRAF3IP1-201ENST00000373327 TLDC2A0PJX2 215 aa19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 RAD17O75943 681 aa19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 KRT13P13646 458 aa19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 CCDC84Q86UT8 332 aaPredicted RBP19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 MLXIPQ9HAP2 919 aa19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 H0YIN7 160 aa19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 SF3B2Q13435 895 aaKnown RBP19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 ASIC2Q16515 512 aa19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 MED1Q15648 1581 aaPredicted RBP19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 NPHP3-ACAD11A0A0J9YXS1 232 aa19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 POTEB3A0JP26 581 aa19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 POTECB2RU33 542 aa19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 EEF1GP26641 437 aaKnown RBP19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 KIAA0753Q2KHM9 967 aa19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 POTEBQ6S5H4 581 aa19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 BICD1Q96G01 975 aa19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 NOX5Q96PH1 765 aa19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 LARGE2Q8N3Y3 721 aa19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 NDST4Q9H3R1 872 aa19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 FAN1Q9Y2M0 1017 aa19.56■□□□□ 0.72
TRAF3IP1-201ENST00000373327 TADA3O75528 432 aa19.55■□□□□ 0.72
TRAF3IP1-201ENST00000373327 TAL1P17542 331 aaPredicted RBP19.55■□□□□ 0.72
TRAF3IP1-201ENST00000373327 SEPT2Q15019 361 aa19.55■□□□□ 0.72
TRAF3IP1-201ENST00000373327 HAUS3Q68CZ6 603 aa19.55■□□□□ 0.72
TRAF3IP1-201ENST00000373327 TMC4Q7Z404 712 aa19.55■□□□□ 0.72
TRAF3IP1-201ENST00000373327 TDRD3Q9H7E2 651 aaKnown RBP19.55■□□□□ 0.72
TRAF3IP1-201ENST00000373327 BBOX1O75936 387 aa19.55■□□□□ 0.72
TRAF3IP1-201ENST00000373327 KIAA0754O94854 1291 aa19.55■□□□□ 0.72
TRAF3IP1-201ENST00000373327 NSMFQ6X4W1 530 aa19.55■□□□□ 0.72
TRAF3IP1-201ENST00000373327 CCDC155Q8N6L0 562 aa19.55■□□□□ 0.72
TRAF3IP1-201ENST00000373327 PIGOQ8TEQ8 1089 aa19.55■□□□□ 0.72
TRAF3IP1-201ENST00000373327 CSRNP1Q96S65 589 aa19.55■□□□□ 0.72
TRAF3IP1-201ENST00000373327 ERLIN2O94905 339 aa19.55■□□□□ 0.72
TRAF3IP1-201ENST00000373327 NR2F2P24468 414 aa19.55■□□□□ 0.72
TRAF3IP1-201ENST00000373327 FBXO11Q86XK2 927 aa19.55■□□□□ 0.72
TRAF3IP1-201ENST00000373327 FAM133AQ8N9E0 248 aa19.55■□□□□ 0.72
TRAF3IP1-201ENST00000373327 ZNF185O15231 689 aa19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 GALNT17Q6IS24 598 aa19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 DHTKD1Q96HY7 919 aaPredicted RBP19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 SMARCAL1Q9NZC9 954 aa19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 FLT1P17948 1338 aa19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 SPATA31A5Q5VU36 1347 aa19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 SPATA31A7Q8IWB4 1347 aa19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 NCK2O43639 380 aa19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 PRPF6O94906 941 aaKnown RBP19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 HARSP12081 509 aaKnown RBP19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 VAV2P52735 878 aa19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 IL17RBQ9NRM6 502 aa19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 INTS13Q9NVM9 706 aa19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 LGALS16A8MUM7 142 aa19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 SH2D3AQ9BRG2 576 aa19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 ADAMTS1Q9UHI8 967 aa19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 AFDNP55196 1824 aaKnown RBP19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 EPB41P11171 864 aaKnown RBP19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 ABCB5Q2M3G0 1257 aa19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 KCTD16Q68DU8 428 aa19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 CC2D1AQ6P1N0 951 aaPredicted RBP19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.54■□□□□ 0.72
TRAF3IP1-201ENST00000373327 SHTN1A0MZ66 631 aa19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 POTEFA5A3E0 1075 aa19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 POTEIP0CG38 1075 aa19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 WHAMMP3Q1A5X7 153 aa19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 POTEGQ6S5H5 508 aa19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 POTEEQ6S8J3 1075 aa19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 TBC1D5Q92609 795 aa19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 ARMCX3Q9UH62 379 aaPredicted RBP19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 RGPD5Q99666 1765 aa19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 CCDC169A6NNP5 214 aa19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 PMS1P54277 932 aaKnown RBP19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 ADGRF4Q8IZF3 695 aa19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 TRIM9Q9C026 710 aa19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 DAGLAQ9Y4D2 1042 aa19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 TERF2Q15554 542 aa19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 SLC30A10Q6XR72 485 aa19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 TBC1D16Q8TBP0 767 aa19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 U2AF1L4Q8WU68 220 aaKnown RBP19.53■□□□□ 0.72
TRAF3IP1-201ENST00000373327 KCNK3O14649 394 aa19.52■□□□□ 0.72
TRAF3IP1-201ENST00000373327 EXOC3O60645 756 aa19.52■□□□□ 0.72
TRAF3IP1-201ENST00000373327 ASPRV1Q53RT3 343 aa19.52■□□□□ 0.72
TRAF3IP1-201ENST00000373327 JCADQ9P266 1359 aa19.52■□□□□ 0.72
TRAF3IP1-201ENST00000373327 STXBP3O00186 592 aa19.52■□□□□ 0.72
TRAF3IP1-201ENST00000373327 GH2P01242 217 aa19.52■□□□□ 0.72
TRAF3IP1-201ENST00000373327 ATP1A1P05023 1023 aaKnown RBP19.52■□□□□ 0.72
TRAF3IP1-201ENST00000373327 ATP1A2P50993 1020 aa19.52■□□□□ 0.72
TRAF3IP1-201ENST00000373327 CDC37Q16543 378 aaPredicted RBP19.52■□□□□ 0.72
TRAF3IP1-201ENST00000373327 CCDC25Q86WR0 208 aa19.52■□□□□ 0.72
TRAF3IP1-201ENST00000373327 FBXL16Q8N461 479 aa19.52■□□□□ 0.72
TRAF3IP1-201ENST00000373327 MAD2L2Q9UI95 211 aa19.52■□□□□ 0.72
TRAF3IP1-201ENST00000373327 PACSIN2Q9UNF0 486 aaPredicted RBP19.52■□□□□ 0.72
TRAF3IP1-201ENST00000373327 MRFAP1Q9Y605 127 aa19.52■□□□□ 0.72
TRAF3IP1-201ENST00000373327 CETN1Q12798 172 aa19.52■□□□□ 0.71
TRAF3IP1-201ENST00000373327 BRD3Q15059 726 aa19.52■□□□□ 0.71
TRAF3IP1-201ENST00000373327 DUSP10Q9Y6W6 482 aa19.52■□□□□ 0.71
TRAF3IP1-201ENST00000373327 GOLGA6BA6NDN3 693 aa19.51■□□□□ 0.71
TRAF3IP1-201ENST00000373327 GAS7O60861 476 aa19.51■□□□□ 0.71
TRAF3IP1-201ENST00000373327 CDR1P51861 262 aa19.51■□□□□ 0.71
TRAF3IP1-201ENST00000373327 CTTNQ14247 550 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms