RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 STAG2Q8N3U4 1231 aa21.93■■□□□ 1.1
TMEM53-201ENST00000372235 MTIF3Q9H2K0 278 aaKnown RBP21.93■■□□□ 1.1
TMEM53-201ENST00000372235 RIOX1Q9H6W3 641 aa21.93■■□□□ 1.1
TMEM53-201ENST00000372235 STXBP5LQ9Y2K9 1186 aa21.93■■□□□ 1.1
TMEM53-201ENST00000372235 TMEM265A0A087WTH1 108 aa21.92■■□□□ 1.1
TMEM53-201ENST00000372235 A6NJR5 290 aa21.92■■□□□ 1.1
TMEM53-201ENST00000372235 CFBP00751 764 aa21.92■■□□□ 1.1
TMEM53-201ENST00000372235 SMARCA1P28370 1054 aa21.92■■□□□ 1.1
TMEM53-201ENST00000372235 MCM5P33992 734 aa21.92■■□□□ 1.1
TMEM53-201ENST00000372235 HSD17B4P51659 736 aa21.92■■□□□ 1.1
TMEM53-201ENST00000372235 PURAQ00577 322 aaKnown RBP21.92■■□□□ 1.1
TMEM53-201ENST00000372235 TROAPQ12815 778 aa21.92■■□□□ 1.1
TMEM53-201ENST00000372235 C9orf50Q5SZB4 431 aa21.92■■□□□ 1.1
TMEM53-201ENST00000372235 RNF20Q5VTR2 975 aa21.92■■□□□ 1.1
TMEM53-201ENST00000372235 PSRC1Q6PGN9 363 aaPredicted RBP21.92■■□□□ 1.1
TMEM53-201ENST00000372235 KCNV1Q6PIU1 500 aa21.92■■□□□ 1.1
TMEM53-201ENST00000372235 CTCFLQ8NI51 663 aaPredicted RBP21.92■■□□□ 1.1
TMEM53-201ENST00000372235 TMEM87BQ96K49 555 aa21.92■■□□□ 1.1
TMEM53-201ENST00000372235 LZTS2Q9BRK4 669 aa21.92■■□□□ 1.1
TMEM53-201ENST00000372235 MTMR10Q9NXD2 777 aa21.92■■□□□ 1.1
TMEM53-201ENST00000372235 PNMA6FA0A0J9YX94 578 aa21.91■■□□□ 1.1
TMEM53-201ENST00000372235 DDAH1O94760 285 aa21.91■■□□□ 1.1
TMEM53-201ENST00000372235 CALM1P0DP23 149 aa21.91■■□□□ 1.1
TMEM53-201ENST00000372235 CALM2P0DP24 149 aa21.91■■□□□ 1.1
TMEM53-201ENST00000372235 CALM3P0DP25 149 aa21.91■■□□□ 1.1
TMEM53-201ENST00000372235 GNAQP50148 359 aa21.91■■□□□ 1.1
TMEM53-201ENST00000372235 PTPN11Q06124 597 aaPredicted RBP21.91■■□□□ 1.1
TMEM53-201ENST00000372235 TAAR1Q96RJ0 339 aa21.91■■□□□ 1.1
TMEM53-201ENST00000372235 ESYT1Q9BSJ8 1104 aa21.91■■□□□ 1.1
TMEM53-201ENST00000372235 HIPK3Q9H422 1215 aa21.91■■□□□ 1.1
TMEM53-201ENST00000372235 DDX49Q9Y6V7 483 aaKnown RBP21.91■■□□□ 1.1
TMEM53-201ENST00000372235 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.9■■□□□ 1.1
TMEM53-201ENST00000372235 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.9■■□□□ 1.1
TMEM53-201ENST00000372235 GH1P01241 217 aa21.9■■□□□ 1.1
TMEM53-201ENST00000372235 MYL3P08590 195 aa21.9■■□□□ 1.1
TMEM53-201ENST00000372235 NFRKBQ6P4R8 1299 aa21.9■■□□□ 1.1
TMEM53-201ENST00000372235 MB21D2Q8IYB1 491 aaPredicted RBP21.9■■□□□ 1.1
TMEM53-201ENST00000372235 IGDCC4Q8TDY8 1250 aa21.9■■□□□ 1.1
TMEM53-201ENST00000372235 MYH6P13533 1939 aa21.89■■□□□ 1.09
TMEM53-201ENST00000372235 GCOM1H8Y6P7 765 aaPredicted RBP21.89■■□□□ 1.09
TMEM53-201ENST00000372235 POLR2MP0CAP2 368 aa21.89■■□□□ 1.09
TMEM53-201ENST00000372235 STOX1Q6ZVD7 989 aa21.89■■□□□ 1.09
TMEM53-201ENST00000372235 HOMER1Q86YM7 354 aa21.89■■□□□ 1.09
TMEM53-201ENST00000372235 RPUSD2Q8IZ73 545 aaKnown RBP21.89■■□□□ 1.09
TMEM53-201ENST00000372235 LSG1Q9H089 658 aaKnown RBP21.89■■□□□ 1.09
TMEM53-201ENST00000372235 ALDH8A1Q9H2A2 487 aaPredicted RBP21.89■■□□□ 1.09
TMEM53-201ENST00000372235 PXMP2Q9NR77 195 aa21.89■■□□□ 1.09
TMEM53-201ENST00000372235 CCDC69A6NI79 296 aa21.88■■□□□ 1.09
TMEM53-201ENST00000372235 NR3C2P08235 984 aa21.88■■□□□ 1.09
TMEM53-201ENST00000372235 CCDC62Q6P9F0 684 aa21.88■■□□□ 1.09
TMEM53-201ENST00000372235 NFXL1Q6ZNB6 911 aa21.88■■□□□ 1.09
TMEM53-201ENST00000372235 SEPT14Q6ZU15 432 aa21.88■■□□□ 1.09
TMEM53-201ENST00000372235 Q7L0L9 218 aa21.88■■□□□ 1.09
TMEM53-201ENST00000372235 TBC1D5Q92609 795 aa21.88■■□□□ 1.09
TMEM53-201ENST00000372235 PPP1R12CQ9BZL4 782 aa21.88■■□□□ 1.09
TMEM53-201ENST00000372235 ANO2Q9NQ90 1003 aa21.88■■□□□ 1.09
TMEM53-201ENST00000372235 LAMA3Q16787 3333 aa21.88■■□□□ 1.09
TMEM53-201ENST00000372235 GRIN2DO15399 1336 aa21.87■■□□□ 1.09
TMEM53-201ENST00000372235 SZT2Q5T011 3432 aa21.87■■□□□ 1.09
TMEM53-201ENST00000372235 PRC1O43663 620 aa21.87■■□□□ 1.09
TMEM53-201ENST00000372235 B4GALT4O60513 344 aa21.87■■□□□ 1.09
TMEM53-201ENST00000372235 TGFB3P10600 412 aa21.87■■□□□ 1.09
TMEM53-201ENST00000372235 EIF2AK2P19525 551 aaKnown RBP21.87■■□□□ 1.09
TMEM53-201ENST00000372235 CASTP20810 708 aaKnown RBP21.87■■□□□ 1.09
TMEM53-201ENST00000372235 LIFRP42702 1097 aa21.87■■□□□ 1.09
TMEM53-201ENST00000372235 LAMC2Q13753 1193 aa21.87■■□□□ 1.09
TMEM53-201ENST00000372235 TMEM63BQ5T3F8 832 aa21.87■■□□□ 1.09
TMEM53-201ENST00000372235 CHST3Q7LGC8 479 aa21.87■■□□□ 1.09
TMEM53-201ENST00000372235 EMID1Q96A84 441 aaPredicted RBP21.87■■□□□ 1.09
TMEM53-201ENST00000372235 RRP36Q96EU6 259 aaKnown RBP21.87■■□□□ 1.09
TMEM53-201ENST00000372235 PIGSQ96S52 555 aa21.87■■□□□ 1.09
TMEM53-201ENST00000372235 SPZ1Q9BXG8 430 aa21.87■■□□□ 1.09
TMEM53-201ENST00000372235 IL23AQ9NPF7 189 aa21.87■■□□□ 1.09
TMEM53-201ENST00000372235 COL20A1Q9P218 1284 aa21.87■■□□□ 1.09
TMEM53-201ENST00000372235 SEC63Q9UGP8 760 aaKnown RBP21.87■■□□□ 1.09
TMEM53-201ENST00000372235 MRVI1Q9Y6F6 885 aa21.87■■□□□ 1.09
TMEM53-201ENST00000372235 STAM2O75886 525 aa21.86■■□□□ 1.09
TMEM53-201ENST00000372235 PFKMP08237 780 aa21.86■■□□□ 1.09
TMEM53-201ENST00000372235 CSF2RAP15509 400 aa21.86■■□□□ 1.09
TMEM53-201ENST00000372235 EPHB4P54760 987 aa21.86■■□□□ 1.09
TMEM53-201ENST00000372235 ANTXR2P58335 489 aa21.86■■□□□ 1.09
TMEM53-201ENST00000372235 PSMC6P62333 389 aa21.86■■□□□ 1.09
TMEM53-201ENST00000372235 NECTIN1Q15223 517 aa21.86■■□□□ 1.09
TMEM53-201ENST00000372235 ZNF654Q8IZM8 581 aa21.86■■□□□ 1.09
TMEM53-201ENST00000372235 KATNAL1Q9BW62 490 aa21.86■■□□□ 1.09
TMEM53-201ENST00000372235 LY9Q9HBG7 655 aa21.86■■□□□ 1.09
TMEM53-201ENST00000372235 SLC27A2O14975 620 aa21.85■■□□□ 1.09
TMEM53-201ENST00000372235 DGKDQ16760 1214 aa21.85■■□□□ 1.09
TMEM53-201ENST00000372235 CREB3L3Q68CJ9 461 aa21.85■■□□□ 1.09
TMEM53-201ENST00000372235 SYNE3Q6ZMZ3 975 aa21.85■■□□□ 1.09
TMEM53-201ENST00000372235 CUL5Q93034 780 aa21.85■■□□□ 1.09
TMEM53-201ENST00000372235 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.85■■□□□ 1.09
TMEM53-201ENST00000372235 PDCD2LQ9BRP1 358 aa21.85■■□□□ 1.09
TMEM53-201ENST00000372235 NOC4LQ9BVI4 516 aaKnown RBP21.85■■□□□ 1.09
TMEM53-201ENST00000372235 TRPV6Q9H1D0 765 aa21.85■■□□□ 1.09
TMEM53-201ENST00000372235 DDX41Q9UJV9 622 aaKnown RBP21.85■■□□□ 1.09
TMEM53-201ENST00000372235 OPLAHO14841 1288 aa21.84■■□□□ 1.09
TMEM53-201ENST00000372235 CYTH3O43739 400 aa21.84■■□□□ 1.09
TMEM53-201ENST00000372235 PPP1R11O60927 126 aaPredicted RBP21.84■■□□□ 1.09
TMEM53-201ENST00000372235 FGBP02675 491 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms