RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 TSEN34Q9BSV6 310 aaKnown RBP11.93□□□□□ -0.5
COL5A1-202ENST00000371820 IL25Q9H293 177 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 TMEM63CQ9P1W3 806 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 LAMA2P24043 3122 aaKnown RBP11.93□□□□□ -0.5
COL5A1-202ENST00000371820 SYCE3A1L190 88 aa11.92□□□□□ -0.5
COL5A1-202ENST00000371820 GOLGA6L6A8MZA4 724 aa11.92□□□□□ -0.5
COL5A1-202ENST00000371820 DHX16O60231 1041 aaKnown RBP11.92□□□□□ -0.5
COL5A1-202ENST00000371820 F13A1P00488 732 aa11.92□□□□□ -0.5
COL5A1-202ENST00000371820 CYP21A2P08686 494 aa11.92□□□□□ -0.5
COL5A1-202ENST00000371820 HMGB1P09429 215 aaKnown RBP11.92□□□□□ -0.5
COL5A1-202ENST00000371820 AK2P54819 239 aa11.92□□□□□ -0.5
COL5A1-202ENST00000371820 SNAP25P60880 206 aa11.92□□□□□ -0.5
COL5A1-202ENST00000371820 PTH1RQ03431 593 aa11.92□□□□□ -0.5
COL5A1-202ENST00000371820 TLE2Q04725 743 aa11.92□□□□□ -0.5
COL5A1-202ENST00000371820 PKP1Q13835 747 aa11.92□□□□□ -0.5
COL5A1-202ENST00000371820 ZNF697Q5TEC3 545 aa11.92□□□□□ -0.5
COL5A1-202ENST00000371820 CCDC144CPQ8IYA2 1237 aa11.92□□□□□ -0.5
COL5A1-202ENST00000371820 SCAND2PQ9GZW5 306 aaPredicted RBP11.92□□□□□ -0.5
COL5A1-202ENST00000371820 CYP39A1Q9NYL5 469 aa11.92□□□□□ -0.5
COL5A1-202ENST00000371820 SYNRGQ9UMZ2 1314 aa11.91□□□□□ -0.5
COL5A1-202ENST00000371820 A0A0C4DFX4 3053 aa11.91□□□□□ -0.5
COL5A1-202ENST00000371820 PTPDC1A2A3K4 754 aa11.91□□□□□ -0.5
COL5A1-202ENST00000371820 MOXD2PA6NHM9 499 aa11.91□□□□□ -0.5
COL5A1-202ENST00000371820 PTMAP06454 111 aaKnown RBP11.91□□□□□ -0.5
COL5A1-202ENST00000371820 CLTBP09497 229 aa11.91□□□□□ -0.5
COL5A1-202ENST00000371820 CASTP20810 708 aaKnown RBP11.91□□□□□ -0.5
COL5A1-202ENST00000371820 SYT1P21579 422 aa11.91□□□□□ -0.5
COL5A1-202ENST00000371820 ITGB8P26012 769 aa11.91□□□□□ -0.5
COL5A1-202ENST00000371820 CNTN2Q02246 1040 aa11.91□□□□□ -0.5
COL5A1-202ENST00000371820 TRAF1Q13077 416 aa11.91□□□□□ -0.5
COL5A1-202ENST00000371820 MUM1L1Q5H9M0 696 aa11.91□□□□□ -0.5
COL5A1-202ENST00000371820 ATL3Q6DD88 541 aa11.91□□□□□ -0.5
COL5A1-202ENST00000371820 RNF207Q6ZRF8 634 aa11.91□□□□□ -0.5
COL5A1-202ENST00000371820 PCSK9Q8NBP7 692 aaKnown RBP11.91□□□□□ -0.5
COL5A1-202ENST00000371820 NUP133Q8WUM0 1156 aa11.91□□□□□ -0.5
COL5A1-202ENST00000371820 FGD4Q96M96 766 aa11.91□□□□□ -0.5
COL5A1-202ENST00000371820 UPF3BQ9BZI7 483 aaKnown RBP11.91□□□□□ -0.5
COL5A1-202ENST00000371820 RBM8AQ9Y5S9 174 aaKnown RBP11.91□□□□□ -0.5
COL5A1-202ENST00000371820 ELP1O95163 1332 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 ABCB11O95342 1321 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 SOWAHBA6NEL2 793 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 E7EWF7 191 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 IFIT3O14879 490 aaKnown RBP11.9□□□□□ -0.5
COL5A1-202ENST00000371820 KIAA0355O15063 1070 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 PQBP1O60828 265 aaKnown RBP11.9□□□□□ -0.5
COL5A1-202ENST00000371820 GOLGA8HP0CJ92 632 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 CST5P28325 142 aaPredicted RBP11.9□□□□□ -0.5
COL5A1-202ENST00000371820 ACLYP53396 1101 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 KRT85P78386 507 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 BAATQ14032 418 aaPredicted RBP11.9□□□□□ -0.5
COL5A1-202ENST00000371820 HSP90AA2PQ14568 343 aaPredicted RBP11.9□□□□□ -0.5
COL5A1-202ENST00000371820 WTAPQ15007 396 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 SEC23AQ15436 765 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 CDC37Q16543 378 aaPredicted RBP11.9□□□□□ -0.5
COL5A1-202ENST00000371820 CCDC144BQ3MJ40 725 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 BLOC1S2Q6QNY1 142 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 KLHDC9Q8NEP7 349 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 DNERQ8NFT8 737 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 FAM161BQ96MY7 647 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 MTA3Q9BTC8 594 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 VTA1Q9NP79 307 aa11.9□□□□□ -0.5
COL5A1-202ENST00000371820 LRRC37A2A6NM11 1700 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 MCM3APO60318 1980 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 NFIBO00712 420 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 ADCY6O43306 1168 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 C6orf222P0C671 652 aaPredicted RBP11.89□□□□□ -0.51
COL5A1-202ENST00000371820 CALML3P27482 149 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 ALDH5A1P51649 535 aaPredicted RBP11.89□□□□□ -0.51
COL5A1-202ENST00000371820 GJA9P57773 515 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 HMGN5P82970 282 aaKnown RBP11.89□□□□□ -0.51
COL5A1-202ENST00000371820 SMAD3P84022 425 aaKnown RBP11.89□□□□□ -0.51
COL5A1-202ENST00000371820 TNFAIP2Q03169 654 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 USH1GQ495M9 461 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 IQSEC1Q6DN90 963 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 CCSAPQ6IQ19 270 aaPredicted RBP11.89□□□□□ -0.51
COL5A1-202ENST00000371820 NOL8Q76FK4 1167 aaKnown RBP11.89□□□□□ -0.51
COL5A1-202ENST00000371820 CYB5R4Q7L1T6 521 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 ANKRD33Q7Z3H0 272 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 MCF2L2Q86YR7 1114 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 ADGRF4Q8IZF3 695 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 RGS22Q8NE09 1264 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 GLT1D1Q96MS3 346 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 JAKMIP1Q96N16 626 aaKnown RBP11.89□□□□□ -0.51
COL5A1-202ENST00000371820 TOX2Q96NM4 488 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 UBA5Q9GZZ9 404 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 PDCL3Q9H2J4 239 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 ZSCAN16Q9H4T2 348 aaPredicted RBP11.89□□□□□ -0.51
COL5A1-202ENST00000371820 STARD7Q9NQZ5 370 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 USP25Q9UHP3 1055 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 MRPL11Q9Y3B7 192 aaKnown RBP11.89□□□□□ -0.51
COL5A1-202ENST00000371820 UNC80Q8N2C7 3258 aa11.89□□□□□ -0.51
COL5A1-202ENST00000371820 MROH7Q68CQ1 1323 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 MYADML2A6NDP7 307 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 GOLGA6L4A6NEF3 574 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 KLRF2D3W0D1 207 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 ZEB2O60315 1214 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 CCDC192P0DO97 292 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 RAG1P15918 1043 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 GJB2P29033 226 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 EPHB4P54760 987 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms