RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SRLQ86TD4 932 aa16.52■□□□□ 0.23
COL5A1-201ENST00000371817 HOOK2Q96ED9 719 aa16.52■□□□□ 0.23
COL5A1-201ENST00000371817 SNX14Q9Y5W7 946 aa16.52■□□□□ 0.23
COL5A1-201ENST00000371817 H2AFZP0C0S5 128 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 PPP2R5BQ15173 497 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 H2AFVQ71UI9 128 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 USHBP1Q8N6Y0 703 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 CHMP6Q96FZ7 201 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 SPTLC3Q9NUV7 552 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 CAB39Q9Y376 341 aaPredicted RBP16.51■□□□□ 0.23
COL5A1-201ENST00000371817 RNF103-CHMP3A0A140T963 221 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 IQANK1A0A1B0GTG1 560 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 TNNI1P19237 187 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 CA4P22748 312 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 DEFA1P59665 94 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 DEFA3P59666 94 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 RASSF3Q86WH2 238 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 HORMAD1Q86X24 394 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 MRPL50Q8N5N7 158 aaKnown RBP16.51■□□□□ 0.23
COL5A1-201ENST00000371817 TNNC2P02585 160 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 COG4Q9H9E3 785 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 PPARGC1AQ9UBK2 798 aaKnown RBP16.51■□□□□ 0.23
COL5A1-201ENST00000371817 ADCY3O60266 1144 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 ARMCX3Q9UH62 379 aaPredicted RBP16.51■□□□□ 0.23
COL5A1-201ENST00000371817 AOX1Q06278 1338 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 SPDYE16A6NNV3 312 aaPredicted RBP16.51■□□□□ 0.23
COL5A1-201ENST00000371817 PLS3P13797 630 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 SPDYE2Q495Y8 402 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 APOBEC2Q9Y235 224 aaKnown RBP16.51■□□□□ 0.23
COL5A1-201ENST00000371817 EIF4E1BA6NMX2 242 aaKnown RBP16.51■□□□□ 0.23
COL5A1-201ENST00000371817 MORC2Q9Y6X9 1032 aaPredicted RBP16.51■□□□□ 0.23
COL5A1-201ENST00000371817 LAMB3Q13751 1172 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 MCUQ8NE86 351 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 KLC2Q9H0B6 622 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 PCDHB13Q9Y5F0 798 aa16.51■□□□□ 0.23
COL5A1-201ENST00000371817 PRPF6O94906 941 aaKnown RBP16.5■□□□□ 0.23
COL5A1-201ENST00000371817 HSPA6P17066 643 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 FAM69CQ0P6D2 419 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 PCGF5Q86SE9 256 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 WDR75Q8IWA0 830 aaKnown RBP16.5■□□□□ 0.23
COL5A1-201ENST00000371817 ST7Q9NRC1 585 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 SLC52A1Q9NWF4 448 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 CASP14P31944 242 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 POLR2FP61218 127 aaKnown RBP16.5■□□□□ 0.23
COL5A1-201ENST00000371817 ADCK1Q86TW2 530 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 RETREG2Q8NC44 543 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 CASP10Q92851 521 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 PLAAQ9Y263 795 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 EFCAB14O75071 495 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 MYOCDQ8IZQ8 938 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 NOC2LQ9Y3T9 749 aaKnown RBP16.5■□□□□ 0.23
COL5A1-201ENST00000371817 GGCXP38435 758 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 SP4Q02446 784 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 PICALMQ13492 652 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 KIF19Q2TAC6 998 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 KLC3Q6P597 504 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 CDR2LQ86X02 465 aaPredicted RBP16.5■□□□□ 0.23
COL5A1-201ENST00000371817 ARIH1Q9Y4X5 557 aaPredicted RBP16.5■□□□□ 0.23
COL5A1-201ENST00000371817 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.5■□□□□ 0.23
COL5A1-201ENST00000371817 SRGAP2BP0DMP2 458 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 APLFQ8IW19 511 aaPredicted RBP16.5■□□□□ 0.23
COL5A1-201ENST00000371817 RFWD2Q8NHY2 731 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 ATP6V1E2Q96A05 226 aa16.5■□□□□ 0.23
COL5A1-201ENST00000371817 SLC4A1P02730 911 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 MORF4L2Q15014 288 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 ATP6V0A4Q9HBG4 840 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 EPM2AIP1Q7L775 607 aaPredicted RBP16.49■□□□□ 0.23
COL5A1-201ENST00000371817 MRPS26Q9BYN8 205 aaKnown RBP16.49■□□□□ 0.23
COL5A1-201ENST00000371817 LRWD1Q9UFC0 647 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 MID2Q9UJV3 735 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 L3MBTL1Q9Y468 752 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 SFMBT1Q9UHJ3 866 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 TLK1Q9UKI8 766 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 TPCN1Q9ULQ1 816 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 SERPINB3P29508 390 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 NELFCDQ8IXH7 590 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 TUBGCP3Q96CW5 907 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 NR1H4Q96RI1 486 aaPredicted RBP16.49■□□□□ 0.23
COL5A1-201ENST00000371817 SLC13A4Q9UKG4 626 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 B4E1Z4 1266 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 KCNA3P22001 575 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 PODNQ7Z5L7 613 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 TDRD7Q8NHU6 1098 aaKnown RBP16.49■□□□□ 0.23
COL5A1-201ENST00000371817 H7C0C1 242 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 ATP5OP48047 213 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 MSH6P52701 1360 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 KRT7P08729 469 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 KMT5BQ4FZB7 885 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 SCYL2Q6P3W7 929 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 CABP7Q86V35 215 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 ETNK1Q9HBU6 452 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 FIS1Q9Y3D6 152 aa16.49■□□□□ 0.23
COL5A1-201ENST00000371817 NFU1Q9UMS0 254 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 EIF2AK4Q9P2K8 1649 aaKnown RBP16.48■□□□□ 0.23
COL5A1-201ENST00000371817 TTC1Q99614 292 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 FAM83GA6ND36 823 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 LZTS3O60299 673 aaPredicted RBP16.48■□□□□ 0.23
COL5A1-201ENST00000371817 KRT19P08727 400 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 SNRPA1P09661 255 aaKnown RBP16.48■□□□□ 0.23
COL5A1-201ENST00000371817 BZW1Q7L1Q6 419 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms