RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 CCDC189A1A4V9 331 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 LRRC53A6NM62 1247 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 PDE4DQ08499 809 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 TROAPQ12815 778 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 HLTFQ14527 1009 aaKnown RBP eCLIP10.69□□□□□ -0.7
LRRC40-201ENST00000370952 HLFQ16534 295 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 KLHL7Q8IXQ5 586 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 LPIN2Q92539 896 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 PYM1Q9BRP8 204 aaKnown RBP10.69□□□□□ -0.7
LRRC40-201ENST00000370952 TMEM60Q9H2L4 133 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 SLC24A3Q9HC58 644 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 NMT2O60551 498 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 RHOBTB3O94955 611 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 RPSAP08865 295 aaKnown RBP10.69□□□□□ -0.7
LRRC40-201ENST00000370952 CCNE1P24864 410 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 LONP1P36776 959 aaKnown RBP10.69□□□□□ -0.7
LRRC40-201ENST00000370952 UBA7P41226 1012 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 RCAN1P53805 252 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 EVX2Q03828 476 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 WLSQ5T9L3 541 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 TMTC3Q6ZXV5 915 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 ADGRA1Q86SQ6 560 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 PLA2G12BQ9BX93 195 aa10.69□□□□□ -0.7
LRRC40-201ENST00000370952 CTSWP56202 376 aa10.68□□□□□ -0.7
LRRC40-201ENST00000370952 CDK17Q00537 523 aa10.68□□□□□ -0.7
LRRC40-201ENST00000370952 KCNB1Q14721 858 aa10.68□□□□□ -0.7
LRRC40-201ENST00000370952 PTPROQ16827 1216 aa10.68□□□□□ -0.7
LRRC40-201ENST00000370952 C4orf32Q8N8J7 132 aa10.68□□□□□ -0.7
LRRC40-201ENST00000370952 GPKOWQ92917 476 aaPredicted RBP eCLIP10.68□□□□□ -0.7
LRRC40-201ENST00000370952 ERGIC2Q96RQ1 377 aa10.68□□□□□ -0.7
LRRC40-201ENST00000370952 HMGB1P1B2RPK0 211 aaPredicted RBP10.68□□□□□ -0.7
LRRC40-201ENST00000370952 RAD51CO43502 376 aa10.68□□□□□ -0.7
LRRC40-201ENST00000370952 PPP1R12BO60237 982 aaPredicted RBP10.68□□□□□ -0.7
LRRC40-201ENST00000370952 NEBLO76041 1014 aa10.68□□□□□ -0.7
LRRC40-201ENST00000370952 CLNS1AP54105 237 aaKnown RBP10.68□□□□□ -0.7
LRRC40-201ENST00000370952 PUM3Q15397 648 aaKnown RBP10.68□□□□□ -0.7
LRRC40-201ENST00000370952 TDRD12Q587J7 1177 aaKnown RBP10.68□□□□□ -0.7
LRRC40-201ENST00000370952 DDX42Q86XP3 938 aaKnown RBP eCLIP10.68□□□□□ -0.7
LRRC40-201ENST00000370952 CCDC155Q8N6L0 562 aa10.68□□□□□ -0.7
LRRC40-201ENST00000370952 NOX5Q96PH1 765 aa10.68□□□□□ -0.7
LRRC40-201ENST00000370952 LRP2BPQ9P2M1 347 aa10.68□□□□□ -0.7
LRRC40-201ENST00000370952 KAT6BQ8WYB5 2073 aa10.68□□□□□ -0.7
LRRC40-201ENST00000370952 GMNCA6NCL1 334 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 GOLGA6L10A6NI86 522 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 IRS4O14654 1257 aaPredicted RBP10.67□□□□□ -0.7
LRRC40-201ENST00000370952 PALMO75781 387 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 SCG2P13521 617 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 BCAMP50895 628 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 ASIC1P78348 528 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 PLCB4Q15147 1175 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 GLE1Q53GS7 698 aaKnown RBP10.67□□□□□ -0.7
LRRC40-201ENST00000370952 ANKRD20A8PQ5CZ79 823 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 DTHD1Q6ZMT9 781 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 KIF6Q6ZMV9 814 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 CD302Q8IX05 232 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 NOC3LQ8WTT2 800 aaKnown RBP10.67□□□□□ -0.7
LRRC40-201ENST00000370952 DHTKD1Q96HY7 919 aaPredicted RBP10.67□□□□□ -0.7
LRRC40-201ENST00000370952 TMBIM4Q9HC24 238 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 NLRC4Q9NPP4 1024 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 LEMD3Q9Y2U8 911 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 BCORQ6W2J9 1755 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 A0A1W2PQJ5 194 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 GCFC2P16383 781 aaKnown RBP10.67□□□□□ -0.7
LRRC40-201ENST00000370952 GNAT2P19087 354 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 CYP7A1P22680 504 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 ENOX2Q16206 610 aaKnown RBP10.67□□□□□ -0.7
LRRC40-201ENST00000370952 ODF2Q5BJF6 829 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 MREGQ8N565 214 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 ZNF622Q969S3 477 aaKnown RBP eCLIP10.67□□□□□ -0.71e-6■■■■□ 22.5
LRRC40-201ENST00000370952 SGSM3Q96HU1 749 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 CNOT8Q9UFF9 292 aaKnown RBP10.67□□□□□ -0.7
LRRC40-201ENST00000370952 ABCF2Q9UG63 623 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 SIK3Q9Y2K2 1263 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 MYH1P12882 1939 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 MYH4Q9Y623 1939 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 SKAP2O75563 359 aaPredicted RBP10.67□□□□□ -0.7
LRRC40-201ENST00000370952 HSD17B3P37058 310 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 EHHADHQ08426 723 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 PPP2R5BQ15173 497 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 FIGNQ5HY92 759 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 EMC10Q5UCC4 262 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 FAM114A1Q8IWE2 563 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 TBC1D31Q96DN5 1066 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 FAXDC2Q96IV6 333 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 SEC16BQ96JE7 1060 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 TACO1Q9BSH4 297 aaKnown RBP10.67□□□□□ -0.7
LRRC40-201ENST00000370952 SLC39A2Q9NP94 309 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 KBTBD4Q9NVX7 518 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 RBM28Q9NW13 759 aaKnown RBP10.67□□□□□ -0.7
LRRC40-201ENST00000370952 MYH7BA7E2Y1 1941 aa10.67□□□□□ -0.7
LRRC40-201ENST00000370952 PNPLA7Q6ZV29 1317 aa10.66□□□□□ -0.7
LRRC40-201ENST00000370952 DOCK2Q92608 1830 aa10.66□□□□□ -0.7
LRRC40-201ENST00000370952 PHF20L1A8MW92 1017 aa10.66□□□□□ -0.7
LRRC40-201ENST00000370952 DCDC2CA8MYV0 355 aa10.66□□□□□ -0.7
LRRC40-201ENST00000370952 GCOM1H8Y6P7 765 aaPredicted RBP10.66□□□□□ -0.7
LRRC40-201ENST00000370952 MYZAPP0CAP1 466 aa10.66□□□□□ -0.7
LRRC40-201ENST00000370952 PLCG1P19174 1290 aa10.66□□□□□ -0.7
LRRC40-201ENST00000370952 FGFR2P21802 821 aa10.66□□□□□ -0.7
LRRC40-201ENST00000370952 SCTRP47872 440 aa10.66□□□□□ -0.7
LRRC40-201ENST00000370952 TRAPPC10P48553 1259 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms