RNA–Protein interactions for RNA: ENST00000369128.9

VPS45-201, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2 BASIC

Gene VPS45, Length 2,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-201ENST00000369128 USP14P54578 494 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 CUL4BQ13620 913 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 MORC3Q14149 939 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 NCAPHQ15003 741 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 DPY19L2Q6NUT2 758 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 KANK3Q6NY19 840 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 CABP7Q86V35 215 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 CPXCR1Q8N123 301 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 CLEC4DQ8WXI8 215 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 SMARCE1Q969G3 411 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 ATG4CQ96DT6 458 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 C12orf42Q96LP6 360 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 HSD3B7Q9H2F3 369 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 TTC12Q9H892 705 aaPredicted RBP10.2□□□□□ -0.78
VPS45-201ENST00000369128 AS3MTQ9HBK9 375 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 RAVER2Q9HCJ3 691 aaKnown RBP10.2□□□□□ -0.78
VPS45-201ENST00000369128 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.2□□□□□ -0.78
VPS45-201ENST00000369128 COL20A1Q9P218 1284 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 AFG3L2Q9Y4W6 797 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 A0A0G2JMZ2 1700 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 ABCB11O95342 1321 aa10.2□□□□□ -0.78
VPS45-201ENST00000369128 POTEIP0CG38 1075 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 POTEJP0CG39 1038 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 UBXN2AP68543 259 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 ETNPPLQ8TBG4 499 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 CDCA5Q96FF9 252 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 BPIFA3Q9BQP9 254 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 HOMER2Q9NSB8 354 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 HOOK1Q9UJC3 728 aaKnown RBP10.19□□□□□ -0.78
VPS45-201ENST00000369128 VWA5AO00534 786 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 FOSP01100 380 aaPredicted RBP10.19□□□□□ -0.78
VPS45-201ENST00000369128 GRB10Q13322 594 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 PRR16Q569H4 304 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 MUM1L1Q5H9M0 696 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 MOXD1Q6UVY6 613 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 USP50Q70EL3 339 aaPredicted RBP10.19□□□□□ -0.78
VPS45-201ENST00000369128 SMYD4Q8IYR2 804 aaPredicted RBP10.19□□□□□ -0.78
VPS45-201ENST00000369128 REPS2Q8NFH8 660 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 RASSF8Q8NHQ8 419 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 CLMNQ96JQ2 1002 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 MED15Q96RN5 788 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 TAF1DQ9H5J8 278 aaPredicted RBP10.19□□□□□ -0.78
VPS45-201ENST00000369128 LRWD1Q9UFC0 647 aa10.19□□□□□ -0.78
VPS45-201ENST00000369128 MRPL11Q9Y3B7 192 aaKnown RBP10.19□□□□□ -0.78
VPS45-201ENST00000369128 ZC3H4Q9UPT8 1303 aaKnown RBP10.18□□□□□ -0.78
VPS45-201ENST00000369128 IGLV3-22A0A075B6J6 115 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 GCOM1H8Y6P7 765 aaPredicted RBP10.18□□□□□ -0.78
VPS45-201ENST00000369128 POLR2MP0CAP2 368 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 HSD17B4P51659 736 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 FMR1Q06787 632 aaKnown RBP eCLIP10.18□□□□□ -0.78
VPS45-201ENST00000369128 SPIRE1Q08AE8 756 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 ECM1Q16610 540 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 EAPPQ56P03 285 aaPredicted RBP10.18□□□□□ -0.78
VPS45-201ENST00000369128 RRAGBQ5VZM2 374 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 SLC30A10Q6XR72 485 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 ZFP91Q96JP5 570 aaPredicted RBP10.18□□□□□ -0.78
VPS45-201ENST00000369128 PNMA5Q96PV4 448 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 NAT10Q9H0A0 1025 aaKnown RBP10.18□□□□□ -0.78
VPS45-201ENST00000369128 KBTBD4Q9NVX7 518 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 RIPK3Q9Y572 518 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 BECN2A8MW95 431 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 CYP3A4P08684 503 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 ALAS1P13196 640 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 CD44P16070 742 aaKnown RBP10.18□□□□□ -0.78
VPS45-201ENST00000369128 CIITAP33076 1130 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 STAT3P40763 770 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 MAP3K9P80192 1104 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 Q4G0T1 1027 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 KCNK18Q7Z418 384 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 PYM1Q9BRP8 204 aaKnown RBP10.18□□□□□ -0.78
VPS45-201ENST00000369128 BLOC1S4Q9NUP1 217 aa10.18□□□□□ -0.78
VPS45-201ENST00000369128 C19orf81C9J6K1 198 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 GOLGA6L19H0YKK7 550 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 MSH4O15457 936 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 GTPBP6O43824 516 aaPredicted RBP10.17□□□□□ -0.78
VPS45-201ENST00000369128 TRAF1Q13077 416 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 PDIA5Q14554 519 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 TMEM266Q2M3C6 531 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 TREML2Q5T2D2 321 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 MCTP2Q6DN12 878 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 POTEEQ6S8J3 1075 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 PLA2G4DQ86XP0 818 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 TRMT44Q8IYL2 757 aaKnown RBP10.17□□□□□ -0.78
VPS45-201ENST00000369128 TRIML1Q8N9V2 468 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 IL31RAQ8NI17 732 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 SNX29Q8TEQ0 813 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 ZC3H15Q8WU90 426 aaKnown RBP10.17□□□□□ -0.78
VPS45-201ENST00000369128 ELP3Q9H9T3 547 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 ZNF214Q9UL59 606 aaPredicted RBP10.17□□□□□ -0.78
VPS45-201ENST00000369128 PCDHA12Q9UN75 941 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 IRF6O14896 467 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 PPP1R12BO60237 982 aaPredicted RBP10.17□□□□□ -0.78
VPS45-201ENST00000369128 SMC2O95347 1197 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 ATP1A3P13637 1013 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 GHRHRQ02643 423 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 SH3D19Q5HYK7 790 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 GSDMAQ96QA5 445 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 NAP1L4Q99733 375 aaKnown RBP10.17□□□□□ -0.78
VPS45-201ENST00000369128 CCDC39Q9UFE4 941 aa10.17□□□□□ -0.78
VPS45-201ENST00000369128 ADAMTS5Q9UNA0 930 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms