RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 KIF2CQ99661 725 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 CNNM2Q9H8M5 875 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 VAV3Q9UKW4 847 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 ZNRF3Q9ULT6 936 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 IFT172Q9UG01 1749 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 SSH2Q76I76 1423 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 TMEM265A0A087WTH1 108 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 MEIS3P2A8K0S8 358 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 GNAT3A8MTJ3 354 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 RGS13O14921 159 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 UBOX5O94941 541 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 MAP4K4O95819 1239 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 CBX7O95931 251 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 DEKP35659 375 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 ETV3P41162 512 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 RGS19P49795 217 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 PRKCQQ04759 706 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 ZNF827Q17R98 1081 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 NBPF6Q5VWK0 638 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 ZNF746Q6NUN9 644 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 ZNF574Q6ZN55 896 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 VSIG10LQ86VR7 867 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 FAM169BQ8N8A8 192 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 VWCEQ96DN2 955 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 CCDC74BQ96LY2 380 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 NBPF4Q96M43 638 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 NMRK2Q9NPI5 230 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 PAK6Q9NQU5 681 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 PRKAG3Q9UGI9 489 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 SNX11Q9Y5W9 270 aa6.45□□□□□ -1.38
ECHDC1-204ENST00000368292 DHX57Q6P158 1386 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 CICQ96RK0 1608 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 CYP7A1P22680 504 aa6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 CD96P40200 585 aa6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 GIPRP48546 466 aa6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 GP2P55259 537 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 NLRC3Q7RTR2 1065 aa6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 NBPF11Q86T75 865 aa6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 PHACTR4Q8IZ21 702 aa6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 MFSD4AQ8N468 514 aa6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 HNRNPLLQ8WVV9 542 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 TMEM40Q8WWA1 233 aa6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 MISP3Q96FF7 219 aa6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 COX4I2Q96KJ9 171 aa6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 SEMA3GQ9NS98 782 aa6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 SLC5A6Q9Y289 635 aa6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 ST14Q9Y5Y6 855 aa6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 OAS3Q9Y6K5 1087 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 PLEKHH1Q9ULM0 1364 aa6.44□□□□□ -1.38
ECHDC1-204ENST00000368292 DAPK1P53355 1430 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 PDE4DIPQ5VU43 2346 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 LMO7Q8WWI1 1683 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 SMAD7O15105 426 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 PPFIA4O75335 1185 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 CD8BP10966 210 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 NME1P15531 152 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 POLR2BP30876 1174 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 KIR3DL1P43629 444 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 EIF6P56537 245 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 TNK2Q07912 1038 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 FOXD4Q12950 439 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 BMS1Q14692 1282 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 CHRNA2Q15822 529 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 AOC3Q16853 763 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 STK11IPQ8N1F8 1099 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 ABHD8Q96I13 439 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 HRASLS5Q96KN8 279 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 HSPA12BQ96MM6 686 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 KREMEN1Q96MU8 473 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 FERD3LQ96RJ6 166 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 MTA3Q9BTC8 594 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 PRDM11Q9NQV5 511 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 ANGEL1Q9UNK9 670 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 USP19O94966 1318 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 PITPNM2Q9BZ72 1349 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 KIAA0232Q92628 1395 aa6.43□□□□□ -1.38
ECHDC1-204ENST00000368292 AKAP12Q02952 1782 aa6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 WNK3Q9BYP7 1800 aa6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 TNFRSF10CO14798 259 aa6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 CREB3O43889 395 aa6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 LRRN2O75325 713 aa6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 ACRP10323 421 aa6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 RAG1P15918 1043 aa6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 CLCN7P51798 805 aa6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 RAB33AQ14088 237 aa6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 MYBPC2Q14324 1141 aa6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 LRRFIP1Q32MZ4 808 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 CDKAL1Q5VV42 579 aa6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 KRBA2Q6ZNG9 492 aa6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 RBBP8NLQ8NC74 664 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 FLCNQ8NFG4 579 aa6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 RNF141Q8WVD5 230 aa6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 FBXL18Q96ME1 805 aa6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 CLTCL1P53675 1640 aa6.42□□□□□ -1.38
ECHDC1-204ENST00000368292 TLDC2A0PJX2 215 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 FAM155AB1AL88 458 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 FOXN1O15353 648 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 SH3BP5O60239 455 aa6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 EIF3JO75822 258 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-204ENST00000368292 GBP1P32455 592 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms