RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 CDC37Q16543 378 aaPredicted RBP9.35□□□□□ -0.91
PTPRK-206ENST00000368215 FOXP4Q8IVH2 680 aaPredicted RBP9.35□□□□□ -0.91
PTPRK-206ENST00000368215 TRIM58Q8NG06 486 aa9.35□□□□□ -0.91
PTPRK-206ENST00000368215 DDX12PQ92771 950 aa9.35□□□□□ -0.91
PTPRK-206ENST00000368215 SCLT1Q96NL6 688 aa9.35□□□□□ -0.91
PTPRK-206ENST00000368215 TCHPQ9BT92 498 aa9.35□□□□□ -0.91
PTPRK-206ENST00000368215 SH2D4AQ9H788 454 aa9.35□□□□□ -0.91
PTPRK-206ENST00000368215 ADGRG1Q9Y653 693 aa9.35□□□□□ -0.91
PTPRK-206ENST00000368215 TTC26A0AVF1 554 aa9.35□□□□□ -0.91
PTPRK-206ENST00000368215 SMIM23A6NLE4 172 aa9.35□□□□□ -0.91
PTPRK-206ENST00000368215 TNNC1P63316 161 aa9.35□□□□□ -0.91
PTPRK-206ENST00000368215 LONRF2Q1L5Z9 754 aa9.35□□□□□ -0.91
PTPRK-206ENST00000368215 VWA3BQ502W6 1294 aa9.35□□□□□ -0.91
PTPRK-206ENST00000368215 CFAP58Q5T655 872 aa9.35□□□□□ -0.91
PTPRK-206ENST00000368215 NBPF11Q86T75 865 aa9.35□□□□□ -0.91
PTPRK-206ENST00000368215 DYDC1Q8WWB3 177 aa9.35□□□□□ -0.91
PTPRK-206ENST00000368215 THAP9Q9H5L6 903 aa9.35□□□□□ -0.91
PTPRK-206ENST00000368215 NHEJ1Q9H9Q4 299 aaPredicted RBP9.35□□□□□ -0.91
PTPRK-206ENST00000368215 PDE11AQ9HCR9 933 aa9.35□□□□□ -0.91
PTPRK-206ENST00000368215 CLIC2O15247 247 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 SORBS3O60504 671 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 NEFHP12036 1026 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 HARSP12081 509 aaKnown RBP9.34□□□□□ -0.91
PTPRK-206ENST00000368215 RASA1P20936 1047 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 ABCB4P21439 1286 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 SBK1Q52WX2 424 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 SLFN12Q8IYM2 578 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 TBC1D16Q8TBP0 767 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 NDST4Q9H3R1 872 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 STK17AQ9UEE5 414 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 ANAPC4Q9UJX5 808 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 TCHHQ07283 1943 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 RIC1Q4ADV7 1423 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 OPA1O60313 960 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 ALAS1P13196 640 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 EIF4A3P38919 411 aaKnown RBP9.34□□□□□ -0.91
PTPRK-206ENST00000368215 FXR1P51114 621 aaKnown RBP eCLIP9.34□□□□□ -0.91
PTPRK-206ENST00000368215 FKBP3Q00688 224 aaKnown RBP9.34□□□□□ -0.91
PTPRK-206ENST00000368215 NCAPHQ15003 741 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 SEPT2Q15019 361 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 MAN2A1Q16706 1144 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 FAM212AQ96EL1 285 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 TNS2Q63HR2 1409 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 E9PMD0 336 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 SRGAP2O75044 1071 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 RDXP35241 583 aaKnown RBP9.34□□□□□ -0.91
PTPRK-206ENST00000368215 ZBED6P86452 979 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 MIGA2Q7L4E1 593 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 FBXL16Q8N461 479 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 TC2NQ8N9U0 490 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 U2AF1L4Q8WU68 220 aaKnown RBP9.34□□□□□ -0.91
PTPRK-206ENST00000368215 GJD4Q96KN9 370 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-206ENST00000368215 TDRD3Q9H7E2 651 aaKnown RBP9.34□□□□□ -0.91
PTPRK-206ENST00000368215 PI4KBQ9UBF8 816 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 DAGLAQ9Y4D2 1042 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 FLT1P17948 1338 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 TLDC2A0PJX2 215 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 LGALS16A8MUM7 142 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 MYL1P05976 194 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 PLA2G4BP0C869 781 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 CETN2P41208 172 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 CRKP46108 304 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 CHURC1Q8WUH1 139 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 ATRIPQ8WXE1 791 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 ANO3Q9BYT9 981 aa9.34□□□□□ -0.91
PTPRK-206ENST00000368215 A0A1B0GTH6 734 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 SFI1A8K8P3 1242 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 GCOM1H8Y6P7 765 aaPredicted RBP9.33□□□□□ -0.92
PTPRK-206ENST00000368215 GH2P01242 217 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 POLR2MP0CAP2 368 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 BMP3P12645 472 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 CD44P16070 742 aaKnown RBP9.33□□□□□ -0.92
PTPRK-206ENST00000368215 EVX2Q03828 476 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 RPS6KA1Q15418 735 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 VPS72Q15906 364 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 PKN1Q16512 942 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 RC3H1Q5TC82 1133 aaKnown RBP9.33□□□□□ -0.92
PTPRK-206ENST00000368215 ZNF710Q8N1W2 664 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 FAM76AQ8TAV0 307 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 RABGAP1Q9Y3P9 1069 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 MOCS3O95396 460 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 PNMA6AP0CW24 399 aaPredicted RBP9.33□□□□□ -0.92
PTPRK-206ENST00000368215 NPR1P16066 1061 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 CFAP221Q4G0U5 840 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 BARGINQ6ZT62 677 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 RASGRP2Q7LDG7 609 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 FAM178BQ8IXR5 827 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 ADGRF4Q8IZF3 695 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 CHP1Q99653 195 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 CACNA1FO60840 1977 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 ATP2C2O75185 946 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 FLOT1O75955 427 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 ECM2O94769 699 aaPredicted RBP9.33□□□□□ -0.92
PTPRK-206ENST00000368215 GNA14O95837 355 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 EHHADHQ08426 723 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 NR1I3Q14994 352 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 AFAP1L1Q8TED9 768 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 EMILIN3Q9NT22 766 aa9.33□□□□□ -0.92
PTPRK-206ENST00000368215 ADD3Q9UEY8 706 aaKnown RBP9.33□□□□□ -0.92
PTPRK-206ENST00000368215 COL4A3BPQ9Y5P4 624 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms