RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 FXR1P51114 621 aaKnown RBP eCLIP23.54■■□□□ 1.36
SHISA4-201ENST00000362011 GHRHRQ02643 423 aa23.54■■□□□ 1.36
SHISA4-201ENST00000362011 CHST13Q8NET6 341 aa23.54■■□□□ 1.36
SHISA4-201ENST00000362011 USP28Q96RU2 1077 aa23.54■■□□□ 1.36
SHISA4-201ENST00000362011 ACAD9Q9H845 621 aa23.54■■□□□ 1.36
SHISA4-201ENST00000362011 ADGRA2Q96PE1 1338 aa23.53■■□□□ 1.36
SHISA4-201ENST00000362011 SPDYE3A6NKU9 549 aa23.53■■□□□ 1.36
SHISA4-201ENST00000362011 GOLGA6L22H0YM25 854 aa23.53■■□□□ 1.36
SHISA4-201ENST00000362011 HOXA13P31271 388 aaPredicted RBP23.53■■□□□ 1.36
SHISA4-201ENST00000362011 TOB1P50616 345 aaPredicted RBP23.53■■□□□ 1.36
SHISA4-201ENST00000362011 HSD17B4P51659 736 aa23.53■■□□□ 1.36
SHISA4-201ENST00000362011 KIF22Q14807 665 aa23.53■■□□□ 1.36
SHISA4-201ENST00000362011 INF2Q27J81 1249 aa23.53■■□□□ 1.36
SHISA4-201ENST00000362011 TBC1D5Q92609 795 aa23.53■■□□□ 1.36
SHISA4-201ENST00000362011 PGBD1Q96JS3 809 aa23.53■■□□□ 1.36
SHISA4-201ENST00000362011 ANO3Q9BYT9 981 aa23.53■■□□□ 1.36
SHISA4-201ENST00000362011 MAF1Q9H063 256 aa23.53■■□□□ 1.36
SHISA4-201ENST00000362011 TXNRD2Q9NNW7 524 aa23.53■■□□□ 1.36
SHISA4-201ENST00000362011 FBXO40Q9UH90 709 aa23.53■■□□□ 1.36
SHISA4-201ENST00000362011 KIAA1217Q5T5P2 1943 aa23.52■■□□□ 1.36
SHISA4-201ENST00000362011 FIBPO43427 364 aa23.52■■□□□ 1.36
SHISA4-201ENST00000362011 PEX10O60683 326 aa23.52■■□□□ 1.36
SHISA4-201ENST00000362011 SLC25A27O95847 323 aa23.52■■□□□ 1.36
SHISA4-201ENST00000362011 CTGFP29279 349 aa23.52■■□□□ 1.36
SHISA4-201ENST00000362011 ERVK-9P63128 1117 aa23.52■■□□□ 1.36
SHISA4-201ENST00000362011 ERVK-24P63145 666 aa23.52■■□□□ 1.36
SHISA4-201ENST00000362011 CSPP1Q1MSJ5 1256 aa23.52■■□□□ 1.36
SHISA4-201ENST00000362011 TTC38Q5R3I4 469 aa23.52■■□□□ 1.36
SHISA4-201ENST00000362011 ANO1Q5XXA6 986 aa23.52■■□□□ 1.36
SHISA4-201ENST00000362011 SH3TC2Q8TF17 1288 aa23.52■■□□□ 1.36
SHISA4-201ENST00000362011 MOV10L1Q9BXT6 1211 aaKnown RBP23.52■■□□□ 1.36
SHISA4-201ENST00000362011 SCAND2PQ9GZW5 306 aaPredicted RBP23.52■■□□□ 1.36
SHISA4-201ENST00000362011 EHMT1Q9H9B1 1298 aa23.52■■□□□ 1.36
SHISA4-201ENST00000362011 POLR3EQ9NVU0 708 aa23.52■■□□□ 1.36
SHISA4-201ENST00000362011 ATP2B1P20020 1258 aa23.51■■□□□ 1.35
SHISA4-201ENST00000362011 CEBPZQ03701 1054 aaKnown RBP23.51■■□□□ 1.35
SHISA4-201ENST00000362011 NSMFQ6X4W1 530 aa23.51■■□□□ 1.35
SHISA4-201ENST00000362011 RNF207Q6ZRF8 634 aa23.51■■□□□ 1.35
SHISA4-201ENST00000362011 NEK8Q86SG6 692 aa23.51■■□□□ 1.35
SHISA4-201ENST00000362011 NCAPG2Q86XI2 1143 aa23.51■■□□□ 1.35
SHISA4-201ENST00000362011 TBCKQ8TEA7 893 aa23.51■■□□□ 1.35
SHISA4-201ENST00000362011 FTOQ9C0B1 505 aaKnown RBP eCLIP23.51■■□□□ 1.35
SHISA4-201ENST00000362011 RTEL1Q9NZ71 1219 aa23.51■■□□□ 1.35
SHISA4-201ENST00000362011 MORF4L1Q9UBU8 362 aa23.51■■□□□ 1.35
SHISA4-201ENST00000362011 CLIC4Q9Y696 253 aa23.51■■□□□ 1.35
SHISA4-201ENST00000362011 YEATS4O95619 227 aa23.5■■□□□ 1.35
SHISA4-201ENST00000362011 MCM4P33991 863 aa23.5■■□□□ 1.35
SHISA4-201ENST00000362011 SF3A1Q15459 793 aaKnown RBP23.5■■□□□ 1.35
SHISA4-201ENST00000362011 FCHSD1Q86WN1 690 aa23.5■■□□□ 1.35
SHISA4-201ENST00000362011 SPATA32Q96LK8 384 aa23.5■■□□□ 1.35
SHISA4-201ENST00000362011 GDPD2Q9HCC8 539 aa23.5■■□□□ 1.35
SHISA4-201ENST00000362011 CEP131Q9UPN4 1083 aa23.5■■□□□ 1.35
SHISA4-201ENST00000362011 NASPP49321 788 aaPredicted RBP23.49■■□□□ 1.35
SHISA4-201ENST00000362011 CCNA1P78396 465 aa23.49■■□□□ 1.35
SHISA4-201ENST00000362011 NBR1Q14596 966 aa23.49■■□□□ 1.35
SHISA4-201ENST00000362011 STK38Q15208 465 aa23.49■■□□□ 1.35
SHISA4-201ENST00000362011 ANKRD13CQ8N6S4 541 aa23.49■■□□□ 1.35
SHISA4-201ENST00000362011 SHCBP1Q8NEM2 672 aa23.49■■□□□ 1.35
SHISA4-201ENST00000362011 GPRC5AQ8NFJ5 357 aa23.49■■□□□ 1.35
SHISA4-201ENST00000362011 LEO1Q8WVC0 666 aaPredicted RBP23.49■■□□□ 1.35
SHISA4-201ENST00000362011 COLQQ9Y215 455 aaPredicted RBP23.49■■□□□ 1.35
SHISA4-201ENST00000362011 PCDHB6Q9Y5E3 794 aa23.49■■□□□ 1.35
SHISA4-201ENST00000362011 DDX11L8A8MPP1 907 aa23.48■■□□□ 1.35
SHISA4-201ENST00000362011 RPS6P62753 249 aaKnown RBP23.48■■□□□ 1.35
SHISA4-201ENST00000362011 Q3C1V9 767 aa23.48■■□□□ 1.35
SHISA4-201ENST00000362011 SLC30A10Q6XR72 485 aa23.48■■□□□ 1.35
SHISA4-201ENST00000362011 TMEM87AQ8NBN3 555 aa23.48■■□□□ 1.35
SHISA4-201ENST00000362011 A1CFQ9NQ94 594 aaKnown RBP23.48■■□□□ 1.35
SHISA4-201ENST00000362011 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.48■■□□□ 1.35
SHISA4-201ENST00000362011 SRRDQ9UH36 339 aa23.48■■□□□ 1.35
SHISA4-201ENST00000362011 LRRC37A2A6NM11 1700 aa23.48■■□□□ 1.35
SHISA4-201ENST00000362011 ZNF236Q9UL36 1845 aa23.48■■□□□ 1.35
SHISA4-201ENST00000362011 PFASO15067 1338 aa23.47■■□□□ 1.35
SHISA4-201ENST00000362011 DOCK3Q8IZD9 2030 aa23.47■■□□□ 1.35
SHISA4-201ENST00000362011 BMP15O95972 392 aa23.47■■□□□ 1.35
SHISA4-201ENST00000362011 ERCC3P19447 782 aa23.47■■□□□ 1.35
SHISA4-201ENST00000362011 SREBF1P36956 1147 aa23.47■■□□□ 1.35
SHISA4-201ENST00000362011 BAATQ14032 418 aaPredicted RBP23.47■■□□□ 1.35
SHISA4-201ENST00000362011 NFKBIBQ15653 356 aa23.47■■□□□ 1.35
SHISA4-201ENST00000362011 FAM110CQ1W6H9 321 aa23.47■■□□□ 1.35
SHISA4-201ENST00000362011 LETM2Q2VYF4 491 aa23.47■■□□□ 1.35
SHISA4-201ENST00000362011 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.47■■□□□ 1.35
SHISA4-201ENST00000362011 LINC00301Q8NCQ3 95 aa23.47■■□□□ 1.35
SHISA4-201ENST00000362011 SYTL5Q8TDW5 730 aaPredicted RBP23.47■■□□□ 1.35
SHISA4-201ENST00000362011 TRIM47Q96LD4 638 aa23.47■■□□□ 1.35
SHISA4-201ENST00000362011 NAP1L4Q99733 375 aaKnown RBP23.47■■□□□ 1.35
SHISA4-201ENST00000362011 MROH8Q9H579 483 aa23.47■■□□□ 1.35
SHISA4-201ENST00000362011 RCOR1Q9UKL0 485 aa23.47■■□□□ 1.35
SHISA4-201ENST00000362011 MCM3APO60318 1980 aa23.47■■□□□ 1.35
SHISA4-201ENST00000362011 ELP1O95163 1332 aa23.46■■□□□ 1.35
SHISA4-201ENST00000362011 WNT7AO00755 349 aa23.46■■□□□ 1.35
SHISA4-201ENST00000362011 ORC2Q13416 577 aaPredicted RBP23.46■■□□□ 1.35
SHISA4-201ENST00000362011 ZNF174Q15697 407 aa23.46■■□□□ 1.35
SHISA4-201ENST00000362011 CYP39A1Q9NYL5 469 aa23.46■■□□□ 1.35
SHISA4-201ENST00000362011 COL20A1Q9P218 1284 aa23.46■■□□□ 1.35
SHISA4-201ENST00000362011 CPA4Q9UI42 421 aa23.46■■□□□ 1.35
SHISA4-201ENST00000362011 PTMSP20962 102 aa23.45■■□□□ 1.34
SHISA4-201ENST00000362011 MCM7P33993 719 aa23.45■■□□□ 1.34
SHISA4-201ENST00000362011 PSMC4P43686 418 aa23.45■■□□□ 1.34
SHISA4-201ENST00000362011 USP11P51784 963 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms