RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 TRERF1Q96PN7 1200 aa26.24■■□□□ 1.79
SDF4-202ENST00000360001 GRPEL1Q9HAV7 217 aa26.24■■□□□ 1.79
SDF4-202ENST00000360001 CCDC192P0DO97 292 aa26.23■■□□□ 1.79
SDF4-202ENST00000360001 CIITAP33076 1130 aa26.23■■□□□ 1.79
SDF4-202ENST00000360001 DEKP35659 375 aaKnown RBP26.23■■□□□ 1.79
SDF4-202ENST00000360001 TYRO3Q06418 890 aa26.23■■□□□ 1.79
SDF4-202ENST00000360001 SNRNP48Q6IEG0 339 aaKnown RBP26.23■■□□□ 1.79
SDF4-202ENST00000360001 HAS1Q92839 578 aa26.23■■□□□ 1.79
SDF4-202ENST00000360001 ERCC4Q92889 916 aaPredicted RBP26.23■■□□□ 1.79
SDF4-202ENST00000360001 GBA2Q9HCG7 927 aaPredicted RBP26.23■■□□□ 1.79
SDF4-202ENST00000360001 SERTAD1Q9UHV2 236 aa26.23■■□□□ 1.79
SDF4-202ENST00000360001 A0A0G2JMZ2 1700 aa26.22■■□□□ 1.79
SDF4-202ENST00000360001 ACTN4O43707 911 aaKnown RBP26.22■■□□□ 1.79
SDF4-202ENST00000360001 CDC25AP30304 524 aa26.22■■□□□ 1.79
SDF4-202ENST00000360001 TXKP42681 527 aa26.22■■□□□ 1.79
SDF4-202ENST00000360001 POTEEQ6S8J3 1075 aa26.22■■□□□ 1.79
SDF4-202ENST00000360001 AK8Q96MA6 479 aa26.22■■□□□ 1.79
SDF4-202ENST00000360001 COL20A1Q9P218 1284 aa26.22■■□□□ 1.79
SDF4-202ENST00000360001 AGTPBP1Q9UPW5 1226 aa26.22■■□□□ 1.79
SDF4-202ENST00000360001 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.22■■□□□ 1.79
SDF4-202ENST00000360001 PP2D1A8MPX8 630 aa26.22■■□□□ 1.79
SDF4-202ENST00000360001 CELF2O95319 508 aaKnown RBP26.22■■□□□ 1.79
SDF4-202ENST00000360001 TECP42680 631 aa26.22■■□□□ 1.79
SDF4-202ENST00000360001 FXR2P51116 673 aaKnown RBP eCLIP26.22■■□□□ 1.79
SDF4-202ENST00000360001 ELOA2Q8IYF1 753 aaPredicted RBP26.22■■□□□ 1.79
SDF4-202ENST00000360001 SAMD3Q8N6K7 520 aa26.22■■□□□ 1.79
SDF4-202ENST00000360001 IGSF22Q8N9C0 903 aa26.22■■□□□ 1.79
SDF4-202ENST00000360001 RNF146Q9NTX7 359 aa26.22■■□□□ 1.79
SDF4-202ENST00000360001 FAM86B1E9PN63 330 aa26.21■■□□□ 1.79
SDF4-202ENST00000360001 FAM86B2P0C5J1 330 aa26.21■■□□□ 1.79
SDF4-202ENST00000360001 Q4G0T1 1027 aa26.21■■□□□ 1.79
SDF4-202ENST00000360001 LENG9Q96B70 501 aa26.21■■□□□ 1.79
SDF4-202ENST00000360001 DHX58Q96C10 678 aa26.21■■□□□ 1.79
SDF4-202ENST00000360001 TEX13BQ9BXU2 312 aa26.21■■□□□ 1.79
SDF4-202ENST00000360001 EHMT1Q9H9B1 1298 aa26.21■■□□□ 1.79
SDF4-202ENST00000360001 KCNMB3Q9NPA1 279 aa26.21■■□□□ 1.79
SDF4-202ENST00000360001 MAP3K20Q9NYL2 800 aaKnown RBP26.21■■□□□ 1.79
SDF4-202ENST00000360001 KIAA1468Q9P260 1216 aa26.21■■□□□ 1.79
SDF4-202ENST00000360001 MRE11P49959 708 aa26.2■■□□□ 1.79
SDF4-202ENST00000360001 SASS6Q6UVJ0 657 aa26.2■■□□□ 1.79
SDF4-202ENST00000360001 CCSER1Q9C0I3 900 aa26.2■■□□□ 1.79
SDF4-202ENST00000360001 E2F4Q16254 413 aa26.2■■□□□ 1.78
SDF4-202ENST00000360001 LBX2Q6XYB7 198 aa26.2■■□□□ 1.78
SDF4-202ENST00000360001 FASTKD5Q7L8L6 764 aaKnown RBP26.2■■□□□ 1.78
SDF4-202ENST00000360001 SYTL5Q8TDW5 730 aaPredicted RBP26.2■■□□□ 1.78
SDF4-202ENST00000360001 ITGBL1O95965 494 aaPredicted RBP26.19■■□□□ 1.78
SDF4-202ENST00000360001 TXLNAP40222 546 aa26.19■■□□□ 1.78
SDF4-202ENST00000360001 MDM2Q00987 491 aaPredicted RBP26.19■■□□□ 1.78
SDF4-202ENST00000360001 SNAPC2Q13487 334 aa26.19■■□□□ 1.78
SDF4-202ENST00000360001 PRR16Q569H4 304 aa26.19■■□□□ 1.78
SDF4-202ENST00000360001 L1TD1Q5T7N2 865 aaKnown RBP26.19■■□□□ 1.78
SDF4-202ENST00000360001 C2orf69Q8N8R5 385 aa26.19■■□□□ 1.78
SDF4-202ENST00000360001 ASCC2Q9H1I8 757 aaPredicted RBP26.19■■□□□ 1.78
SDF4-202ENST00000360001 RPTORQ8N122 1335 aa26.19■■□□□ 1.78
SDF4-202ENST00000360001 FOXN1O15353 648 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 SLFN14P0C7P3 912 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 RPS6P62753 249 aaKnown RBP26.18■■□□□ 1.78
SDF4-202ENST00000360001 IRX3P78415 501 aaPredicted RBP26.18■■□□□ 1.78
SDF4-202ENST00000360001 TMEM266Q2M3C6 531 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 GPAT2Q6NUI2 795 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 SLC30A10Q6XR72 485 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 ETNPPLQ8TBG4 499 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 GJA10Q969M2 543 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 TTC12Q9H892 705 aaPredicted RBP26.18■■□□□ 1.78
SDF4-202ENST00000360001 STAT3P40763 770 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 UBA7P41226 1012 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 UBXN2AP68543 259 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 PNOCQ13519 176 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 PDIA5Q14554 519 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 KARSQ15046 597 aaKnown RBP26.18■■□□□ 1.78
SDF4-202ENST00000360001 TKFCQ3LXA3 575 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 CHADLQ6NUI6 762 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 MB21D1Q8N884 522 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 CYP2W1Q8TAV3 490 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 PYM1Q9BRP8 204 aaKnown RBP26.18■■□□□ 1.78
SDF4-202ENST00000360001 USP25Q9UHP3 1055 aa26.18■■□□□ 1.78
SDF4-202ENST00000360001 IGLV3-22A0A075B6J6 115 aa26.17■■□□□ 1.78
SDF4-202ENST00000360001 IQUBQ8NA54 791 aa26.17■■□□□ 1.78
SDF4-202ENST00000360001 BTBD7Q9P203 1132 aa26.17■■□□□ 1.78
SDF4-202ENST00000360001 ZNF76P36508 570 aa26.16■■□□□ 1.78
SDF4-202ENST00000360001 PLS1Q14651 629 aa26.16■■□□□ 1.78
SDF4-202ENST00000360001 CST9Q5W186 159 aa26.16■■□□□ 1.78
SDF4-202ENST00000360001 KANK3Q6NY19 840 aa26.16■■□□□ 1.78
SDF4-202ENST00000360001 NSMFQ6X4W1 530 aa26.16■■□□□ 1.78
SDF4-202ENST00000360001 RNF207Q6ZRF8 634 aa26.16■■□□□ 1.78
SDF4-202ENST00000360001 DISC1Q9NRI5 854 aa26.16■■□□□ 1.78
SDF4-202ENST00000360001 FRMPD4Q14CM0 1322 aa26.16■■□□□ 1.78
SDF4-202ENST00000360001 TBX3O15119 743 aa26.16■■□□□ 1.78
SDF4-202ENST00000360001 MARCH6O60337 910 aa26.16■■□□□ 1.78
SDF4-202ENST00000360001 XRCC6P12956 609 aaKnown RBP eCLIP26.16■■□□□ 1.78
SDF4-202ENST00000360001 CABP7Q86V35 215 aa26.16■■□□□ 1.78
SDF4-202ENST00000360001 RNF214Q8ND24 703 aa26.16■■□□□ 1.78
SDF4-202ENST00000360001 MMTAG2Q9BU76 263 aaKnown RBP26.16■■□□□ 1.78
SDF4-202ENST00000360001 RAB34Q9BZG1 259 aa26.16■■□□□ 1.78
SDF4-202ENST00000360001 LRWD1Q9UFC0 647 aa26.16■■□□□ 1.78
SDF4-202ENST00000360001 TUBE1Q9UJT0 475 aa26.16■■□□□ 1.78
SDF4-202ENST00000360001 PEX10O60683 326 aa26.15■■□□□ 1.78
SDF4-202ENST00000360001 HERVK_113P62684 666 aa26.15■■□□□ 1.78
SDF4-202ENST00000360001 POSTNQ15063 836 aa26.15■■□□□ 1.78
SDF4-202ENST00000360001 PDXDC2PQ6P474 469 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms