RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 PACS2Q86VP3 889 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 FAM178BQ8IXR5 827 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 CKAP2LQ8IYA6 745 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 NRSN1Q8IZ57 195 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 CLASRPQ8N2M8 674 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 GPATCH11Q8N954 259 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 NPLOC4Q8TAT6 608 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 ZIC5Q96T25 663 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 HOXC10Q9NYD6 342 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 TRHDEQ9UKU6 1024 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 LTBP1Q14766 1721 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 NUP188Q5SRE5 1749 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 NEK3P51956 506 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 ADARP55265 1226 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 LARP1BQ659C4 914 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 FERMT3Q86UX7 667 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 SNX29Q8TEQ0 813 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 GOLGA1Q92805 767 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 ATG4CQ96DT6 458 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 SPON2Q9BUD6 331 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 SUPT16HQ9Y5B9 1047 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 ITIH6Q6UXX5 1313 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 TOR1BO14657 336 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 NME1P15531 152 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 CCNFP41002 786 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 TUBP50607 506 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 DEPTORQ8TB45 409 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 ASB12Q8WXK4 309 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 PPP1R14AQ96A00 147 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 IFT43Q96FT9 208 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 C22orf23Q9BZE7 217 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 CWC25Q9NXE8 425 aaPredicted RBP2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 WSB2Q9NYS7 404 aaPredicted RBP2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 PLCH2O75038 1416 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 UACAQ9BZF9 1416 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 C6orf229H3BNL8 230 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 SUSD5O60279 629 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 MAP3K6O95382 1288 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 ABL1P00519 1130 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 RPN1P04843 607 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 MAP7Q14244 749 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 MEA1Q16626 185 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 ZNF423Q2M1K9 1284 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 PPP4R3BQ5MIZ7 849 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 IL31Q6EBC2 164 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 WAPLQ7Z5K2 1190 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 RASSF3Q86WH2 238 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 ELAC2Q9BQ52 826 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 SOX17Q9H6I2 414 aaPredicted RBP2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 FAM53CQ9NYF3 392 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 SPG7Q9UQ90 795 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 KDM3AQ9Y4C1 1321 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 IBTKQ9P2D0 1353 aaPredicted RBP2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 ATXN7O15265 892 aaPredicted RBP2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 IRAK2O43187 625 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 ACPPP15309 386 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 GSTT1P30711 240 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 MLC1Q15049 377 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 CDAN1Q8IWY9 1227 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 DLG3Q92796 817 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 LRRC59Q96AG4 307 aaKnown RBP2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 RC3H2Q9HBD1 1191 aaKnown RBP2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 PLCB1Q9NQ66 1216 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 VTI1BQ9UEU0 232 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 CBX4O00257 560 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 PPFIA3O75145 1194 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 PTGIRP43119 386 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 GOLGA2Q08379 1002 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 NBPF20Q3BBV1 942 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 TTC6Q86TZ1 520 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 TREML1Q86YW5 311 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 TPH2Q8IWU9 490 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 FAM217AQ8IXS0 508 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 CMIPQ8IY22 773 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 SPPL3Q8TCT6 385 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 SH3KBP1Q96B97 665 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 KCTD15Q96SI1 283 aaPredicted RBP2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 ZKSCAN3Q9BRR0 538 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 C5AR2Q9P296 337 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 PUF60Q9UHX1 559 aaKnown RBP2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 TPX2Q9ULW0 747 aaKnown RBP2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 KCNH4Q9UQ05 1017 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 RPRD2Q5VT52 1461 aaKnown RBP2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 MYOM2P54296 1465 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 PLA2G6O60733 806 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 RAC1P63000 192 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 GPAT2Q6NUI2 795 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 CCDC103Q8IW40 242 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 SP8Q8IXZ3 490 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 CLRN3Q8NCR9 226 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 ATL2Q8NHH9 583 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 PLBD2Q8NHP8 589 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 HPS3Q969F9 1004 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 MRPL38Q96DV4 380 aaKnown RBP2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 SLC9A7Q96T83 725 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 ZDHHC7Q9NXF8 308 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 KLK14Q9P0G3 267 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 FBXO10Q9UK96 956 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 DLC1Q96QB1 1528 aa2.41□□□□□ -2.02
SMARCAD1-202ENST00000359052 KIF20BQ96Q89 1820 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms