RNA–Protein interactions for RNA: ENST00000357880.7

LINC01554-201, Transcript of long intergenic non-protein coding RNA 1554, humanhuman

TSL 1 (best)

Gene LINC01554, Length 804 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554-201ENST00000357880 TRAF1Q13077 416 aa20.36■□□□□ 0.85
LINC01554-201ENST00000357880 DUSP28Q4G0W2 176 aa20.36■□□□□ 0.85
LINC01554-201ENST00000357880 C1orf53Q5VUE5 145 aa20.36■□□□□ 0.85
LINC01554-201ENST00000357880 ARHGEF16Q5VV41 709 aa20.36■□□□□ 0.85
LINC01554-201ENST00000357880 SYNE3Q6ZMZ3 975 aa20.36■□□□□ 0.85
LINC01554-201ENST00000357880 CCDC82Q8N4S0 544 aa20.36■□□□□ 0.85
LINC01554-201ENST00000357880 FANCBQ8NB91 859 aa20.36■□□□□ 0.85
LINC01554-201ENST00000357880 VTI1AQ96AJ9 217 aa20.36■□□□□ 0.85
LINC01554-201ENST00000357880 JAKMIP1Q96N16 626 aaKnown RBP20.36■□□□□ 0.85
LINC01554-201ENST00000357880 GDF15Q99988 308 aa20.36■□□□□ 0.85
LINC01554-201ENST00000357880 BRPF3Q9ULD4 1205 aa20.36■□□□□ 0.85
LINC01554-201ENST00000357880 Q9Y3F1 56 aa20.36■□□□□ 0.85
LINC01554-201ENST00000357880 HMGB1P09429 215 aaKnown RBP20.35■□□□□ 0.85
LINC01554-201ENST00000357880 SMARCA1P28370 1054 aa20.35■□□□□ 0.85
LINC01554-201ENST00000357880 GHRHRQ02643 423 aa20.35■□□□□ 0.85
LINC01554-201ENST00000357880 TLE2Q04725 743 aa20.35■□□□□ 0.85
LINC01554-201ENST00000357880 FSCN1Q16658 493 aaKnown RBP20.35■□□□□ 0.85
LINC01554-201ENST00000357880 APOA5Q6Q788 366 aa20.35■□□□□ 0.85
LINC01554-201ENST00000357880 GLT1D1Q96MS3 346 aa20.35■□□□□ 0.85
LINC01554-201ENST00000357880 PRDM5Q9NQX1 630 aaPredicted RBP20.35■□□□□ 0.85
LINC01554-201ENST00000357880 PXMP2Q9NR77 195 aa20.35■□□□□ 0.85
LINC01554-201ENST00000357880 hCG_1642624A0A1W2PR95 340 aa20.34■□□□□ 0.85
LINC01554-201ENST00000357880 GCOM1H8Y6P7 765 aaPredicted RBP20.34■□□□□ 0.85
LINC01554-201ENST00000357880 PQBP1O60828 265 aaKnown RBP20.34■□□□□ 0.85
LINC01554-201ENST00000357880 POLR2MP0CAP2 368 aa20.34■□□□□ 0.85
LINC01554-201ENST00000357880 MDM2Q00987 491 aaPredicted RBP20.34■□□□□ 0.85
LINC01554-201ENST00000357880 SCFD2Q8WU76 684 aa20.34■□□□□ 0.85
LINC01554-201ENST00000357880 IWS1Q96ST2 819 aa20.34■□□□□ 0.85
LINC01554-201ENST00000357880 MAP3K20Q9NYL2 800 aaKnown RBP20.34■□□□□ 0.85
LINC01554-201ENST00000357880 PRKAG2Q9UGJ0 569 aa20.34■□□□□ 0.85
LINC01554-201ENST00000357880 SEC63Q9UGP8 760 aaKnown RBP20.34■□□□□ 0.85
LINC01554-201ENST00000357880 NR3C2P08235 984 aa20.33■□□□□ 0.85
LINC01554-201ENST00000357880 PPP2R5BQ15173 497 aa20.33■□□□□ 0.85
LINC01554-201ENST00000357880 STXBP2Q15833 593 aa20.33■□□□□ 0.85
LINC01554-201ENST00000357880 CXCL17Q6UXB2 119 aa20.33■□□□□ 0.85
LINC01554-201ENST00000357880 SEPT14Q6ZU15 432 aa20.33■□□□□ 0.85
LINC01554-201ENST00000357880 TMTC3Q6ZXV5 915 aa20.33■□□□□ 0.85
LINC01554-201ENST00000357880 SH3RF1Q7Z6J0 888 aa20.33■□□□□ 0.85
LINC01554-201ENST00000357880 FCHSD1Q86WN1 690 aa20.33■□□□□ 0.85
LINC01554-201ENST00000357880 SAMD3Q8N6K7 520 aa20.33■□□□□ 0.85
LINC01554-201ENST00000357880 COPS5Q92905 334 aa20.33■□□□□ 0.85
LINC01554-201ENST00000357880 PDLIM7Q9NR12 457 aa20.33■□□□□ 0.85
LINC01554-201ENST00000357880 RANBP2P49792 3224 aaKnown RBP20.32■□□□□ 0.84
LINC01554-201ENST00000357880 ELP1O95163 1332 aa20.32■□□□□ 0.84
LINC01554-201ENST00000357880 KLF18A0A0U1RQI7 1052 aa20.32■□□□□ 0.84
LINC01554-201ENST00000357880 ZBTB43O43298 467 aa20.32■□□□□ 0.84
LINC01554-201ENST00000357880 ARIH2O95376 493 aa20.32■□□□□ 0.84
LINC01554-201ENST00000357880 TXNP10599 105 aaKnown RBP20.32■□□□□ 0.84
LINC01554-201ENST00000357880 FGD1P98174 961 aa20.32■□□□□ 0.84
LINC01554-201ENST00000357880 BLOC1S2Q6QNY1 142 aa20.32■□□□□ 0.84
LINC01554-201ENST00000357880 Q6ZUG5 572 aa20.32■□□□□ 0.84
LINC01554-201ENST00000357880 OR6J1Q8NGC5 347 aa20.32■□□□□ 0.84
LINC01554-201ENST00000357880 NAP1L2Q9ULW6 460 aaPredicted RBP20.32■□□□□ 0.84
LINC01554-201ENST00000357880 TRIOBPQ9H2D6 2365 aa20.31■□□□□ 0.84
LINC01554-201ENST00000357880 TRIM43BA6NCK2 446 aa20.31■□□□□ 0.84
LINC01554-201ENST00000357880 ZEB2O60315 1214 aa20.31■□□□□ 0.84
LINC01554-201ENST00000357880 MYCLP12524 364 aaPredicted RBP20.31■□□□□ 0.84
LINC01554-201ENST00000357880 BMP8BP34820 402 aa20.31■□□□□ 0.84
LINC01554-201ENST00000357880 TTLL4Q14679 1199 aa20.31■□□□□ 0.84
LINC01554-201ENST00000357880 TRIM43Q96BQ3 446 aaPredicted RBP20.31■□□□□ 0.84
LINC01554-201ENST00000357880 LBHD1Q9BQE6 289 aaPredicted RBP20.31■□□□□ 0.84
LINC01554-201ENST00000357880 PDCD2LQ9BRP1 358 aa20.31■□□□□ 0.84
LINC01554-201ENST00000357880 USP26Q9BXU7 913 aa20.31■□□□□ 0.84
LINC01554-201ENST00000357880 A0A0U1RQG5 324 aaPredicted RBP20.3■□□□□ 0.84
LINC01554-201ENST00000357880 NKRFO15226 690 aaKnown RBP eCLIP20.3■□□□□ 0.84
LINC01554-201ENST00000357880 EIF3JO75822 258 aaKnown RBP20.3■□□□□ 0.84
LINC01554-201ENST00000357880 CLTBP09497 229 aa20.3■□□□□ 0.84
LINC01554-201ENST00000357880 CDK7P50613 346 aa20.3■□□□□ 0.84
LINC01554-201ENST00000357880 APOBRQ0VD83 1088 aa20.3■□□□□ 0.84
LINC01554-201ENST00000357880 PGM5Q15124 567 aa20.3■□□□□ 0.84
LINC01554-201ENST00000357880 RTN1Q16799 776 aa20.3■□□□□ 0.84
LINC01554-201ENST00000357880 LY6KQ17RY6 165 aa20.3■□□□□ 0.84
LINC01554-201ENST00000357880 CCDC62Q6P9F0 684 aa20.3■□□□□ 0.84
LINC01554-201ENST00000357880 ANKRD33Q7Z3H0 272 aa20.3■□□□□ 0.84
LINC01554-201ENST00000357880 IL31RAQ8NI17 732 aa20.3■□□□□ 0.84
LINC01554-201ENST00000357880 UBE2OQ9C0C9 1292 aaKnown RBP20.3■□□□□ 0.84
LINC01554-201ENST00000357880 RBM28Q9NW13 759 aaKnown RBP20.3■□□□□ 0.84
LINC01554-201ENST00000357880 GOLGA8AA7E2F4 631 aa20.29■□□□□ 0.84
LINC01554-201ENST00000357880 GOLGA8BA8MQT2 603 aa20.29■□□□□ 0.84
LINC01554-201ENST00000357880 DCDC2CA8MYV0 355 aa20.29■□□□□ 0.84
LINC01554-201ENST00000357880 ARVCFO00192 962 aa20.29■□□□□ 0.84
LINC01554-201ENST00000357880 CASTP20810 708 aaKnown RBP20.29■□□□□ 0.84
LINC01554-201ENST00000357880 RPS6KB1P23443 525 aa20.29■□□□□ 0.84
LINC01554-201ENST00000357880 FXR1P51114 621 aaKnown RBP eCLIP20.29■□□□□ 0.84
LINC01554-201ENST00000357880 FAAP100Q0VG06 881 aa20.29■□□□□ 0.84
LINC01554-201ENST00000357880 USP17L6PQ6QN14 398 aa20.29■□□□□ 0.84
LINC01554-201ENST00000357880 BRF1Q92994 677 aa20.29■□□□□ 0.84
LINC01554-201ENST00000357880 ZFP91Q96JP5 570 aaPredicted RBP20.29■□□□□ 0.84
LINC01554-201ENST00000357880 EPB41L2O43491 1005 aaKnown RBP20.28■□□□□ 0.84
LINC01554-201ENST00000357880 CABYRO75952 493 aa20.28■□□□□ 0.84
LINC01554-201ENST00000357880 MYL3P08590 195 aa20.28■□□□□ 0.84
LINC01554-201ENST00000357880 ITGB8P26012 769 aa20.28■□□□□ 0.84
LINC01554-201ENST00000357880 PSMA5P28066 241 aa20.28■□□□□ 0.84
LINC01554-201ENST00000357880 CDC27P30260 824 aa20.28■□□□□ 0.84
LINC01554-201ENST00000357880 CPT1AP50416 773 aa20.28■□□□□ 0.84
LINC01554-201ENST00000357880 PSMC6P62333 389 aa20.28■□□□□ 0.84
LINC01554-201ENST00000357880 VSIG10LQ86VR7 867 aa20.28■□□□□ 0.84
LINC01554-201ENST00000357880 SMARCC2Q8TAQ2 1214 aa20.28■□□□□ 0.84
LINC01554-201ENST00000357880 BADQ92934 168 aa20.28■□□□□ 0.84
LINC01554-201ENST00000357880 TOX2Q96NM4 488 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms