RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 GJB4Q9NTQ9 266 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 SOWAHDA6NJG2 315 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 AFPP02771 609 aaKnown RBP18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 PLCG1P19174 1290 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 LRRC63Q05C16 580 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 NEDD9Q14511 834 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 SLC17A8Q8NDX2 589 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 RAB3IL1Q8TBN0 382 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 TYW1Q9NV66 732 aaKnown RBP18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 IFNB1P01574 187 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 PSMC2P35998 433 aaKnown RBP18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 EPHB4P54760 987 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 BPIFB4P59827 614 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 HLFQ16534 295 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 FAM196AQ6ZSG2 479 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 ARHGAP24Q8N264 748 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 ACRBPQ8NEB7 543 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 DPH5Q9H2P9 285 aa18.7■□□□□ 0.58
TRAPPC11-201ENST00000334690 DAPK3O43293 454 aa18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 TBC1D8O95759 1140 aa18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 SERPINB2P05120 415 aa18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 USP17L2Q6R6M4 530 aa18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 USP42Q9H9J4 1324 aaKnown RBP18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 TULP4Q9NRJ4 1543 aa18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 IRX3P78415 501 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 GKAP1Q5VSY0 366 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 ZBTB8OSQ8IWT0 167 aa18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 THRAP3Q9Y2W1 955 aaKnown RBP18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 QRICH2Q9H0J4 1663 aa18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 DMP1Q13316 513 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 PTPN21Q16825 1174 aa18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 FAM186BQ8IYM0 893 aa18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 RUNDC3BQ96NL0 473 aa18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 ISCA1Q9BUE6 129 aa18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 OSBPL5Q9H0X9 879 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 VPS37BQ9H9H4 285 aa18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 ANAPC4Q9UJX5 808 aa18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 MFAP3LO75121 409 aa18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 KRT31Q15323 416 aa18.69■□□□□ 0.58
TRAPPC11-201ENST00000334690 PRPF6O94906 941 aaKnown RBP18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 ATP1A2P50993 1020 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 CCDC62Q6P9F0 684 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 MCUR1Q96AQ8 359 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 NDST4Q9H3R1 872 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 CCPG1Q9ULG6 757 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 PPEF1O14829 653 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 LRRC41Q15345 812 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 CC2D2BQ6DHV5 1058 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 RAB20Q9NX57 234 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 TCP10L2B9ZVM9 353 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 PLEKHA8P1O95397 391 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 HSPA1LP34931 641 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 ADCY8P40145 1251 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 IRX5P78411 483 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 DIXDC1Q155Q3 683 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 RABL6Q3YEC7 729 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 TCP11X2Q5H9J9 407 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 ANKRD20A3Q5VUR7 823 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 BBOF1Q8ND07 529 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 PARD6BQ9BYG5 372 aa18.68■□□□□ 0.58
TRAPPC11-201ENST00000334690 RASA3Q14644 834 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 KMT5BQ4FZB7 885 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 DYNLL2Q96FJ2 89 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 NACC1Q96RE7 527 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 PASKQ96RG2 1323 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 POLR2BP30876 1174 aaKnown RBP18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 RASSF2P50749 326 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 SLFNL1Q499Z3 407 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 COA7Q96BR5 231 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 KRT12Q99456 494 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 EMILIN3Q9NT22 766 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 LMTK2Q8IWU2 1503 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 MYL7Q01449 175 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 HADHQ16836 314 aaKnown RBP18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 C10orf76Q5T2E6 689 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 NT5C1BQ96P26 610 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 I3L4J1 428 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 DLATP10515 647 aaKnown RBP18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 PTK2Q05397 1052 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 NAA25Q14CX7 972 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 SGMS1Q86VZ5 419 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 CSRNP1Q96S65 589 aa18.67■□□□□ 0.58
TRAPPC11-201ENST00000334690 SEC31AO94979 1220 aaKnown RBP18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 BMP3P12645 472 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 PSMC4P43686 418 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 NSFP46459 744 aaKnown RBP18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 GRAPQ13588 217 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 PTPROQ16827 1216 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 KCTD1Q719H9 257 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 GRAPLQ8TC17 118 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 MIS12Q9H081 205 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 FAM114A2Q9NRY5 505 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 CRB1P82279 1406 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 CLCN6P51797 869 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 NHEJ1Q9H9Q4 299 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 NRKQ7Z2Y5 1582 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 MYO1FO00160 1098 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 PGRMC1O00264 195 aaKnown RBP18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 HEXIM1O94992 359 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms