RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 SRBD1Q8N5C6 995 aaKnown RBP19■□□□□ 0.63
PRKCD-201ENST00000330452 DESI2Q9BSY9 194 aa19■□□□□ 0.63
PRKCD-201ENST00000330452 NDUFAB1O14561 156 aa18.99■□□□□ 0.63
PRKCD-201ENST00000330452 ADAMTS3O15072 1205 aa18.99■□□□□ 0.63
PRKCD-201ENST00000330452 SMNDC1O75940 238 aaKnown RBP eCLIP18.99■□□□□ 0.63
PRKCD-201ENST00000330452 SLC8A1P32418 973 aa18.99■□□□□ 0.63
PRKCD-201ENST00000330452 ACCSLQ4AC99 568 aa18.99■□□□□ 0.63
PRKCD-201ENST00000330452 TMTC3Q6ZXV5 915 aa18.99■□□□□ 0.63
PRKCD-201ENST00000330452 TMEM165Q9HC07 324 aa18.99■□□□□ 0.63
PRKCD-201ENST00000330452 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.99■□□□□ 0.632e-8■■■■■ 177.5
PRKCD-201ENST00000330452 DUOX1Q9NRD9 1551 aa18.99■□□□□ 0.63
PRKCD-201ENST00000330452 GOLGA6CA6NDK9 693 aa18.99■□□□□ 0.63
PRKCD-201ENST00000330452 GOLGA6DP0CG33 693 aa18.99■□□□□ 0.63
PRKCD-201ENST00000330452 CYP2D6P10635 497 aa18.99■□□□□ 0.63
PRKCD-201ENST00000330452 ERCC5P28715 1186 aaPredicted RBP18.99■□□□□ 0.63
PRKCD-201ENST00000330452 TPP2P29144 1249 aaPredicted RBP18.99■□□□□ 0.63
PRKCD-201ENST00000330452 SF3B3Q15393 1217 aaKnown RBP18.99■□□□□ 0.63
PRKCD-201ENST00000330452 TNFRSF25Q93038 417 aa18.99■□□□□ 0.63
PRKCD-201ENST00000330452 GOLGA6AQ9NYA3 693 aa18.99■□□□□ 0.63
PRKCD-201ENST00000330452 SPATA31A6Q5VVP1 1343 aa18.99■□□□□ 0.63
PRKCD-201ENST00000330452 STX10O60499 249 aa18.98■□□□□ 0.63
PRKCD-201ENST00000330452 MECOMQ03112 1051 aa18.98■□□□□ 0.63
PRKCD-201ENST00000330452 PTGDRQ13258 359 aa18.98■□□□□ 0.63
PRKCD-201ENST00000330452 MTF1Q14872 753 aa18.98■□□□□ 0.63
PRKCD-201ENST00000330452 TTC38Q5R3I4 469 aa18.98■□□□□ 0.63
PRKCD-201ENST00000330452 SH3RF1Q7Z6J0 888 aa18.98■□□□□ 0.63
PRKCD-201ENST00000330452 NSUN4Q96CB9 384 aaKnown RBP18.98■□□□□ 0.63
PRKCD-201ENST00000330452 COL5A3P25940 1745 aaPredicted RBP18.98■□□□□ 0.63
PRKCD-201ENST00000330452 SSBP05455 408 aaKnown RBP eCLIP18.98■□□□□ 0.63
PRKCD-201ENST00000330452 GGCXP38435 758 aa18.98■□□□□ 0.63
PRKCD-201ENST00000330452 TPTE2Q6XPS3 522 aa18.98■□□□□ 0.63
PRKCD-201ENST00000330452 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.98■□□□□ 0.63
PRKCD-201ENST00000330452 APTXQ7Z2E3 356 aaKnown RBP18.98■□□□□ 0.63
PRKCD-201ENST00000330452 CDC23Q9UJX2 597 aa18.98■□□□□ 0.63
PRKCD-201ENST00000330452 CNTNAP5Q8WYK1 1306 aa18.98■□□□□ 0.63
PRKCD-201ENST00000330452 A0A1B0GTH6 734 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 FGRP09769 529 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 TUBB4BP68371 445 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 FUKQ8N0W3 1084 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 FAM81AQ8TBF8 368 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 CPLX3Q8WVH0 158 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 OSBPL9Q96SU4 736 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 TRPC6Q9Y210 931 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 TUBBP07437 444 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 PRDX5P30044 214 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 DPYDQ12882 1025 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 SF3B2Q13435 895 aaKnown RBP18.97■□□□□ 0.63
PRKCD-201ENST00000330452 CUL4BQ13620 913 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 PIK3AP1Q6ZUJ8 805 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 ACRBPQ8NEB7 543 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 YIPF2Q9BWQ6 316 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 BLZF1Q9H2G9 400 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 MYL1P05976 194 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 SPATA1Q5VX52 437 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 FERMT2Q96AC1 680 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 DCP1AQ9NPI6 582 aaPredicted RBP18.97■□□□□ 0.63
PRKCD-201ENST00000330452 ANKIB1Q9P2G1 1089 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.97■□□□□ 0.63
PRKCD-201ENST00000330452 SYNRGQ9UMZ2 1314 aa18.97■□□□□ 0.63
PRKCD-201ENST00000330452 CALM1P0DP23 149 aa18.96■□□□□ 0.63
PRKCD-201ENST00000330452 CALM2P0DP24 149 aa18.96■□□□□ 0.63
PRKCD-201ENST00000330452 CALM3P0DP25 149 aa18.96■□□□□ 0.63
PRKCD-201ENST00000330452 PAPOLAP51003 745 aaKnown RBP18.96■□□□□ 0.63
PRKCD-201ENST00000330452 KARSQ15046 597 aaKnown RBP18.96■□□□□ 0.63
PRKCD-201ENST00000330452 CCDC178Q5BJE1 867 aa18.96■□□□□ 0.63
PRKCD-201ENST00000330452 RNF187Q5TA31 235 aaPredicted RBP18.96■□□□□ 0.63
PRKCD-201ENST00000330452 MICALCLQ6ZW33 695 aa18.96■□□□□ 0.63
PRKCD-201ENST00000330452 FBXO33Q7Z6M2 555 aa18.96■□□□□ 0.63
PRKCD-201ENST00000330452 TRPC5Q9UL62 973 aaPredicted RBP18.96■□□□□ 0.63
PRKCD-201ENST00000330452 SOWAHDA6NJG2 315 aa18.96■□□□□ 0.63
PRKCD-201ENST00000330452 DDAH1O94760 285 aa18.96■□□□□ 0.63
PRKCD-201ENST00000330452 ALDH1B1P30837 517 aa18.96■□□□□ 0.63
PRKCD-201ENST00000330452 PPP1R3GB7ZBB8 358 aa18.95■□□□□ 0.62
PRKCD-201ENST00000330452 AGPSO00116 658 aa18.95■□□□□ 0.62
PRKCD-201ENST00000330452 TPD52L2O43399 206 aaKnown RBP18.95■□□□□ 0.62
PRKCD-201ENST00000330452 TM4SF1P30408 202 aa18.95■□□□□ 0.62
PRKCD-201ENST00000330452 NLRP5P59047 1200 aa18.95■□□□□ 0.62
PRKCD-201ENST00000330452 ZBED6P86452 979 aa18.95■□□□□ 0.62
PRKCD-201ENST00000330452 STIM1Q13586 685 aa18.95■□□□□ 0.62
PRKCD-201ENST00000330452 GRIK5Q16478 980 aa18.95■□□□□ 0.62
PRKCD-201ENST00000330452 WDR93Q6P2C0 686 aa18.95■□□□□ 0.62
PRKCD-201ENST00000330452 SH3GL2Q99962 352 aa18.95■□□□□ 0.62
PRKCD-201ENST00000330452 PAGR1Q9BTK6 254 aa18.95■□□□□ 0.62
PRKCD-201ENST00000330452 CORO1CQ9ULV4 474 aaPredicted RBP18.95■□□□□ 0.62
PRKCD-201ENST00000330452 RBM47A0AV96 593 aaKnown RBP18.95■□□□□ 0.62
PRKCD-201ENST00000330452 MCM7P33993 719 aa18.95■□□□□ 0.62
PRKCD-201ENST00000330452 ATP2C1P98194 919 aaPredicted RBP18.95■□□□□ 0.62
PRKCD-201ENST00000330452 RBL2Q08999 1139 aa18.95■□□□□ 0.62
PRKCD-201ENST00000330452 ZRSR2Q15696 482 aaKnown RBP18.95■□□□□ 0.62
PRKCD-201ENST00000330452 ARHGAP22Q7Z5H3 698 aa18.95■□□□□ 0.62
PRKCD-201ENST00000330452 NSMCE1Q8WV22 266 aa18.95■□□□□ 0.62
PRKCD-201ENST00000330452 MRPL44Q9H9J2 332 aaKnown RBP18.95■□□□□ 0.62
PRKCD-201ENST00000330452 LAMB2P55268 1798 aa18.94■□□□□ 0.62
PRKCD-201ENST00000330452 XDHP47989 1333 aa18.94■□□□□ 0.62
PRKCD-201ENST00000330452 AKR1B15C9JRZ8 316 aaPredicted RBP18.94■□□□□ 0.62
PRKCD-201ENST00000330452 IL17AQ16552 155 aa18.94■□□□□ 0.62
PRKCD-201ENST00000330452 SPAG5Q96R06 1193 aa18.94■□□□□ 0.62
PRKCD-201ENST00000330452 A0A0U1RQJ8 604 aa18.94■□□□□ 0.62
PRKCD-201ENST00000330452 SCG2P13521 617 aa18.94■□□□□ 0.62
PRKCD-201ENST00000330452 ROR2Q01974 943 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms