RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 SESTD1Q86VW0 696 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 FAM129AQ9BZQ8 928 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 NSRP1Q9H0G5 558 aaKnown RBP9.24□□□□□ -0.93
SKA2-201ENST00000330137 EPB41L5Q9HCM4 733 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 LUC7LQ9NQ29 371 aaKnown RBP9.24□□□□□ -0.93
SKA2-201ENST00000330137 MAGEC2Q9UBF1 373 aaPredicted RBP9.24□□□□□ -0.93
SKA2-201ENST00000330137 PCDHA13Q9Y5I0 950 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 NHSL1Q5SYE7 1610 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 GPR75-ASB3A0A0A6YYF3 556 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 TRIM75PA6NK02 468 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 M0R2C6 588 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 GLI1P08151 1106 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 LINGO3P0C6S8 592 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 NQO1P15559 274 aaKnown RBP9.24□□□□□ -0.93
SKA2-201ENST00000330137 ATP4AP20648 1035 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 CDC25AP30304 524 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 IL15P40933 162 aaPredicted RBP9.24□□□□□ -0.93
SKA2-201ENST00000330137 SLC7A5Q01650 507 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 MAP3K12Q12852 859 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 QPCTQ16769 361 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 RBM12BQ8IXT5 1001 aaKnown RBP9.24□□□□□ -0.93
SKA2-201ENST00000330137 PROM2Q8N271 834 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 SH3TC2Q8TF17 1288 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 NOX5Q96PH1 765 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 IFIH1Q9BYX4 1025 aaKnown RBP9.24□□□□□ -0.93
SKA2-201ENST00000330137 GPHNQ9NQX3 736 aaPredicted RBP9.24□□□□□ -0.93
SKA2-201ENST00000330137 RBM12Q9NTZ6 932 aaKnown RBP9.24□□□□□ -0.93
SKA2-201ENST00000330137 LRRC42Q9Y546 428 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 ASB3Q9Y575 518 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 MARF1Q9Y4F3 1742 aaKnown RBP9.24□□□□□ -0.93
SKA2-201ENST00000330137 ABCB11O95342 1321 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 LRRD1A4D1F6 860 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 CIAO1O76071 339 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 ECM2O94769 699 aaPredicted RBP9.24□□□□□ -0.93
SKA2-201ENST00000330137 CCDC96Q2M329 555 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 SPRED3Q2MJR0 410 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 KRT28Q7Z3Y7 464 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 ZSCAN29Q8IWY8 852 aaPredicted RBP9.24□□□□□ -0.93
SKA2-201ENST00000330137 LMNTD2Q8IXW0 634 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 GRAMD1CQ8IYS0 662 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 NBPF15Q8N660 670 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 NUP133Q8WUM0 1156 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 TLCD1Q96CP7 247 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 ZNF317Q96PQ6 595 aaPredicted RBP9.24□□□□□ -0.93
SKA2-201ENST00000330137 IRAK4Q9NWZ3 460 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 TMEM59LQ9UK28 342 aa9.24□□□□□ -0.93
SKA2-201ENST00000330137 MYH13Q9UKX3 1938 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 SSU72P8A0A1W2PR75 194 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 GOLGA8AA7E2F4 631 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 RBAK-RBAKDNI3L0D1 243 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 OPLAHO14841 1288 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 FOXP2O15409 715 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 SKAP2O75563 359 aaPredicted RBP9.23□□□□□ -0.93
SKA2-201ENST00000330137 IFIT1P09914 478 aaKnown RBP9.23□□□□□ -0.93
SKA2-201ENST00000330137 ATP2A2P16615 1042 aaKnown RBP9.23□□□□□ -0.93
SKA2-201ENST00000330137 XBP1P17861 261 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 HSD17B3P37058 310 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 PEX19P40855 299 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 GUCY2DQ02846 1103 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 TRPM8Q7Z2W7 1104 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 IRF2BP1Q8IU81 584 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 ADSSL1Q8N142 457 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 AGAP11Q8TF27 550 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 OSBP2Q969R2 916 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 AIFM3Q96NN9 605 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 TRAPPC9Q96Q05 1148 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 XPO6Q96QU8 1125 aaKnown RBP9.23□□□□□ -0.93
SKA2-201ENST00000330137 FAM217BQ9NTX9 383 aaPredicted RBP9.23□□□□□ -0.93
SKA2-201ENST00000330137 RPL26L1Q9UNX3 145 aaKnown RBP9.23□□□□□ -0.93
SKA2-201ENST00000330137 MACROD2A1Z1Q3 448 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 BTBD18B2RXH4 712 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 F8W031 263 aaPredicted RBP9.23□□□□□ -0.93
SKA2-201ENST00000330137 RANBP6O60518 1105 aaKnown RBP9.23□□□□□ -0.93
SKA2-201ENST00000330137 ADAMTS2O95450 1211 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 BAG3O95817 575 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 FAM153BP0C7A2 387 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 TRIM21P19474 475 aaKnown RBP9.23□□□□□ -0.93
SKA2-201ENST00000330137 GRIN1Q05586 938 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 ZNF844Q08AG5 666 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 LAMB3Q13751 1172 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 FAM153CQ494X1 144 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 RIC3Q7Z5B4 369 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 HOOK3Q86VS8 718 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 TMTC2Q8N394 836 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 IGDCC4Q8TDY8 1250 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 CASKIN2Q8WXE0 1202 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 DHTKD1Q96HY7 919 aaPredicted RBP9.23□□□□□ -0.93
SKA2-201ENST00000330137 TLR10Q9BXR5 811 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 KRT23Q9C075 422 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 SAMD15Q9P1V8 674 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 FAM153AQ9UHL3 310 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 PCDHB6Q9Y5E3 794 aa9.23□□□□□ -0.93
SKA2-201ENST00000330137 MYH7P12883 1935 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 ATP8B3O60423 1300 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 KIF1AQ12756 1690 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 ENO4A6NNW6 628 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 O00370 1275 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 ATP11AP98196 1134 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 ALX1Q15699 326 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 COBLL1Q53SF7 1204 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms