RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 SOX1O00570 391 aaPredicted RBP24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 SH2B2O14492 632 aaPredicted RBP24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 CYTH3O43739 400 aa24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 PPP1R11O60927 126 aaPredicted RBP24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 TTLL4Q14679 1199 aa24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 SLC35G1Q2M3R5 365 aa24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 BRDTQ58F21 947 aaPredicted RBP24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 CXCL17Q6UXB2 119 aa24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 HOMER1Q86YM7 354 aa24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 SLC43A3Q8NBI5 491 aa24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 BADQ92934 168 aa24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 TAAR1Q96RJ0 339 aa24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 PIGSQ96S52 555 aa24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 LZTS2Q9BRK4 669 aa24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 SPZ1Q9BXG8 430 aa24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 POLR3EQ9NVU0 708 aa24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 COL20A1Q9P218 1284 aa24.72■■□□□ 1.55
UBE2D3-201ENST00000321805 BAZ2BQ9UIF8 2168 aaKnown RBP24.71■■□□□ 1.55
UBE2D3-201ENST00000321805 PNMA6FA0A0J9YX94 578 aa24.71■■□□□ 1.55
UBE2D3-201ENST00000321805 OPLAHO14841 1288 aa24.71■■□□□ 1.55
UBE2D3-201ENST00000321805 TLR3O15455 904 aaKnown RBP24.71■■□□□ 1.55
UBE2D3-201ENST00000321805 CFBP00751 764 aa24.71■■□□□ 1.55
UBE2D3-201ENST00000321805 CALM1P0DP23 149 aa24.71■■□□□ 1.55
UBE2D3-201ENST00000321805 CALM2P0DP24 149 aa24.71■■□□□ 1.55
UBE2D3-201ENST00000321805 CALM3P0DP25 149 aa24.71■■□□□ 1.55
UBE2D3-201ENST00000321805 RAG1P15918 1043 aa24.71■■□□□ 1.55
UBE2D3-201ENST00000321805 GNAQP50148 359 aa24.71■■□□□ 1.55
UBE2D3-201ENST00000321805 STXBP2Q15833 593 aa24.71■■□□□ 1.55
UBE2D3-201ENST00000321805 TBX21Q9UL17 535 aa24.71■■□□□ 1.55
UBE2D3-201ENST00000321805 CCDC69A6NI79 296 aa24.7■■□□□ 1.54
UBE2D3-201ENST00000321805 NEFLP07196 543 aa24.7■■□□□ 1.54
UBE2D3-201ENST00000321805 TMEM63BQ5T3F8 832 aa24.7■■□□□ 1.54
UBE2D3-201ENST00000321805 ARHGEF16Q5VV41 709 aa24.7■■□□□ 1.54
UBE2D3-201ENST00000321805 FAM126BQ8IXS8 530 aa24.7■■□□□ 1.54
UBE2D3-201ENST00000321805 OR6J1Q8NGC5 347 aa24.7■■□□□ 1.54
UBE2D3-201ENST00000321805 KIAA1217Q5T5P2 1943 aa24.7■■□□□ 1.54
UBE2D3-201ENST00000321805 TSGA10IPQ3SY00 556 aa24.69■■□□□ 1.54
UBE2D3-201ENST00000321805 NFXL1Q6ZNB6 911 aa24.69■■□□□ 1.54
UBE2D3-201ENST00000321805 PXMP2Q9NR77 195 aa24.69■■□□□ 1.54
UBE2D3-201ENST00000321805 KPNA6O60684 536 aa24.68■■□□□ 1.54
UBE2D3-201ENST00000321805 EIF3JO75822 258 aaKnown RBP24.68■■□□□ 1.54
UBE2D3-201ENST00000321805 TXNP10599 105 aaKnown RBP24.68■■□□□ 1.54
UBE2D3-201ENST00000321805 ITGA7Q13683 1181 aa24.68■■□□□ 1.54
UBE2D3-201ENST00000321805 CCDC62Q6P9F0 684 aa24.68■■□□□ 1.54
UBE2D3-201ENST00000321805 SGMS1Q86VZ5 419 aa24.68■■□□□ 1.54
UBE2D3-201ENST00000321805 LRCH3Q96II8 777 aa24.68■■□□□ 1.54
UBE2D3-201ENST00000321805 A6NJR5 290 aa24.67■■□□□ 1.54
UBE2D3-201ENST00000321805 GCOM1H8Y6P7 765 aaPredicted RBP24.67■■□□□ 1.54
UBE2D3-201ENST00000321805 TIMP1P01033 207 aa24.67■■□□□ 1.54
UBE2D3-201ENST00000321805 CD4P01730 458 aa24.67■■□□□ 1.54
UBE2D3-201ENST00000321805 POLR2MP0CAP2 368 aa24.67■■□□□ 1.54
UBE2D3-201ENST00000321805 PTGS1P23219 599 aa24.67■■□□□ 1.54
UBE2D3-201ENST00000321805 ITGB8P26012 769 aa24.67■■□□□ 1.54
UBE2D3-201ENST00000321805 KRT32Q14532 448 aa24.67■■□□□ 1.54
UBE2D3-201ENST00000321805 RRP36Q96EU6 259 aaKnown RBP24.67■■□□□ 1.54
UBE2D3-201ENST00000321805 NEK1Q96PY6 1258 aa24.67■■□□□ 1.54
UBE2D3-201ENST00000321805 GPHNQ9NQX3 736 aaPredicted RBP24.67■■□□□ 1.54
UBE2D3-201ENST00000321805 SCN10AQ9Y5Y9 1956 aa24.66■■□□□ 1.54
UBE2D3-201ENST00000321805 NR3C2P08235 984 aa24.66■■□□□ 1.54
UBE2D3-201ENST00000321805 EIF2AK2P19525 551 aaKnown RBP24.66■■□□□ 1.54
UBE2D3-201ENST00000321805 PURAQ00577 322 aaKnown RBP24.66■■□□□ 1.54
UBE2D3-201ENST00000321805 FPGSQ05932 587 aa24.66■■□□□ 1.54
UBE2D3-201ENST00000321805 PDCD2LQ9BRP1 358 aa24.66■■□□□ 1.54
UBE2D3-201ENST00000321805 MTG1Q9BT17 334 aaPredicted RBP24.66■■□□□ 1.54
UBE2D3-201ENST00000321805 SLC12A7Q9Y666 1083 aa24.66■■□□□ 1.54
UBE2D3-201ENST00000321805 GRIN2DO15399 1336 aa24.65■■□□□ 1.54
UBE2D3-201ENST00000321805 MYL10Q9BUA6 226 aa24.65■■□□□ 1.54
UBE2D3-201ENST00000321805 SEC63Q9UGP8 760 aaKnown RBP24.65■■□□□ 1.54
UBE2D3-201ENST00000321805 ARIH2O95376 493 aa24.64■■□□□ 1.54
UBE2D3-201ENST00000321805 GH1P01241 217 aa24.64■■□□□ 1.54
UBE2D3-201ENST00000321805 MFSD5Q6N075 450 aa24.64■■□□□ 1.54
UBE2D3-201ENST00000321805 SEPT14Q6ZU15 432 aa24.64■■□□□ 1.54
UBE2D3-201ENST00000321805 HMGB1P09429 215 aaKnown RBP24.63■■□□□ 1.53
UBE2D3-201ENST00000321805 COL9A3Q14050 684 aaPredicted RBP24.63■■□□□ 1.53
UBE2D3-201ENST00000321805 SHHQ15465 462 aa24.63■■□□□ 1.53
UBE2D3-201ENST00000321805 KCNV1Q6PIU1 500 aa24.63■■□□□ 1.53
UBE2D3-201ENST00000321805 DHX32Q7L7V1 743 aaKnown RBP24.63■■□□□ 1.53
UBE2D3-201ENST00000321805 EMID1Q96A84 441 aaPredicted RBP24.63■■□□□ 1.53
UBE2D3-201ENST00000321805 FRMPD4Q14CM0 1322 aa24.62■■□□□ 1.53
UBE2D3-201ENST00000321805 MYL3P08590 195 aa24.62■■□□□ 1.53
UBE2D3-201ENST00000321805 HOXA13P31271 388 aaPredicted RBP24.62■■□□□ 1.53
UBE2D3-201ENST00000321805 PGM5Q15124 567 aa24.62■■□□□ 1.53
UBE2D3-201ENST00000321805 C9orf50Q5SZB4 431 aa24.62■■□□□ 1.53
UBE2D3-201ENST00000321805 SYNE3Q6ZMZ3 975 aa24.62■■□□□ 1.53
UBE2D3-201ENST00000321805 COPS5Q92905 334 aa24.62■■□□□ 1.53
UBE2D3-201ENST00000321805 PLEKHA8P1O95397 391 aa24.61■■□□□ 1.53
UBE2D3-201ENST00000321805 PSMC6P62333 389 aa24.61■■□□□ 1.53
UBE2D3-201ENST00000321805 EXOSC10Q01780 885 aaKnown RBP24.61■■□□□ 1.53
UBE2D3-201ENST00000321805 ARHGAP1Q07960 439 aa24.61■■□□□ 1.53
UBE2D3-201ENST00000321805 PPIGQ13427 754 aaKnown RBP eCLIP24.61■■□□□ 1.532e-7■□□□□ 10.5
UBE2D3-201ENST00000321805 VSIG10LQ86VR7 867 aa24.61■■□□□ 1.53
UBE2D3-201ENST00000321805 TMEM199Q8N511 208 aa24.61■■□□□ 1.53
UBE2D3-201ENST00000321805 SRBD1Q8N5C6 995 aaKnown RBP24.61■■□□□ 1.53
UBE2D3-201ENST00000321805 FANCBQ8NB91 859 aa24.61■■□□□ 1.53
UBE2D3-201ENST00000321805 LRRC2Q9BYS8 371 aa24.61■■□□□ 1.53
UBE2D3-201ENST00000321805 ALDH8A1Q9H2A2 487 aaPredicted RBP24.61■■□□□ 1.53
UBE2D3-201ENST00000321805 DDX41Q9UJV9 622 aaKnown RBP24.61■■□□□ 1.53
UBE2D3-201ENST00000321805 MRVI1Q9Y6F6 885 aa24.61■■□□□ 1.53
UBE2D3-201ENST00000321805 LAMA2P24043 3122 aaKnown RBP24.61■■□□□ 1.53
UBE2D3-201ENST00000321805 PIK3CDO00329 1044 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms