RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 SLC4A9Q96Q91 983 aa18.07■□□□□ 0.48
SFXN1-201ENST00000321442 CTTNBP2NLQ9P2B4 639 aa18.07■□□□□ 0.48
SFXN1-201ENST00000321442 FRMD3A2A2Y4 597 aa18.07■□□□□ 0.48
SFXN1-201ENST00000321442 GDF11O95390 407 aa18.07■□□□□ 0.48
SFXN1-201ENST00000321442 EEF1GP26641 437 aaKnown RBP18.07■□□□□ 0.48
SFXN1-201ENST00000321442 LONP1P36776 959 aaKnown RBP18.07■□□□□ 0.48
SFXN1-201ENST00000321442 GRAPQ13588 217 aa18.07■□□□□ 0.48
SFXN1-201ENST00000321442 MYOCDQ8IZQ8 938 aa18.07■□□□□ 0.48
SFXN1-201ENST00000321442 GRAPLQ8TC17 118 aaPredicted RBP18.07■□□□□ 0.48
SFXN1-201ENST00000321442 TSKSQ9UJT2 592 aa18.07■□□□□ 0.48
SFXN1-201ENST00000321442 CPDO75976 1380 aa18.07■□□□□ 0.48
SFXN1-201ENST00000321442 MAP3K9P80192 1104 aa18.07■□□□□ 0.48
SFXN1-201ENST00000321442 MXD3Q9BW11 206 aa18.07■□□□□ 0.48
SFXN1-201ENST00000321442 MTUS1Q9ULD2 1270 aa18.07■□□□□ 0.48
SFXN1-201ENST00000321442 CLTAP09496 248 aa18.06■□□□□ 0.48
SFXN1-201ENST00000321442 SLC16A2P36021 539 aa18.06■□□□□ 0.48
SFXN1-201ENST00000321442 IFNAR2P48551 515 aa18.06■□□□□ 0.48
SFXN1-201ENST00000321442 NNTQ13423 1086 aa18.06■□□□□ 0.48
SFXN1-201ENST00000321442 FAM84BQ96KN1 310 aaPredicted RBP18.06■□□□□ 0.48
SFXN1-201ENST00000321442 MYCBPQ99417 103 aaPredicted RBP18.06■□□□□ 0.48
SFXN1-201ENST00000321442 CHP1Q99653 195 aa18.06■□□□□ 0.48
SFXN1-201ENST00000321442 JPH2Q9BR39 696 aaPredicted RBP18.06■□□□□ 0.48
SFXN1-201ENST00000321442 TTC26A0AVF1 554 aa18.06■□□□□ 0.48
SFXN1-201ENST00000321442 MAGEA9P43362 315 aa18.06■□□□□ 0.48
SFXN1-201ENST00000321442 P2RX5Q93086 422 aa18.06■□□□□ 0.48
SFXN1-201ENST00000321442 RWDD2AQ9UIY3 292 aa18.06■□□□□ 0.48
SFXN1-201ENST00000321442 TRIM28Q13263 835 aaKnown RBP18.06■□□□□ 0.48
SFXN1-201ENST00000321442 INTS5Q6P9B9 1019 aaKnown RBP18.06■□□□□ 0.48
SFXN1-201ENST00000321442 STK38LQ9Y2H1 464 aa18.06■□□□□ 0.48
SFXN1-201ENST00000321442 MIGA2Q7L4E1 593 aa18.06■□□□□ 0.48
SFXN1-201ENST00000321442 ANKRD42Q8N9B4 389 aa18.06■□□□□ 0.48
SFXN1-201ENST00000321442 TC2NQ8N9U0 490 aa18.06■□□□□ 0.48
SFXN1-201ENST00000321442 SLIT1O75093 1534 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 FAM205CA6NFA0 338 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 EPHB4P54760 987 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 ZBED6P86452 979 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 RAD9BQ6WBX8 426 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 DEFB132Q7Z7B7 95 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 TBC1D31Q96DN5 1066 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 RPSAP08865 295 aaKnown RBP18.05■□□□□ 0.48
SFXN1-201ENST00000321442 LACTBP83111 547 aaPredicted RBP18.05■□□□□ 0.48
SFXN1-201ENST00000321442 NIM1KQ8IY84 436 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 ZNF34Q8IZ26 560 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 BICD1Q96G01 975 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 NFU1Q9UMS0 254 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 ESYT3A0FGR9 886 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 FXR1P51114 621 aaKnown RBP eCLIP18.05■□□□□ 0.48
SFXN1-201ENST00000321442 CACNB1Q02641 598 aaPredicted RBP18.05■□□□□ 0.48
SFXN1-201ENST00000321442 ICE2Q659A1 982 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 USP17L2Q6R6M4 530 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 CCDC105Q8IYK2 499 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 SH3RF3Q8TEJ3 882 aaPredicted RBP18.05■□□□□ 0.48
SFXN1-201ENST00000321442 TBC1D22AQ8WUA7 517 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 NKIRAS1Q9NYS0 192 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 SWAP70Q9UH65 585 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 ASIC3Q9UHC3 531 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 IKBKGQ9Y6K9 419 aa18.05■□□□□ 0.48
SFXN1-201ENST00000321442 N4BP1O75113 896 aaKnown RBP18.04■□□□□ 0.48
SFXN1-201ENST00000321442 CFBP00751 764 aa18.04■□□□□ 0.48
SFXN1-201ENST00000321442 ADCY7P51828 1080 aa18.04■□□□□ 0.48
SFXN1-201ENST00000321442 SEL1L2Q5TEA6 688 aa18.04■□□□□ 0.48
SFXN1-201ENST00000321442 GKAP1Q5VSY0 366 aaPredicted RBP18.04■□□□□ 0.48
SFXN1-201ENST00000321442 L2HGDHQ9H9P8 463 aa18.04■□□□□ 0.48
SFXN1-201ENST00000321442 SENP2Q9HC62 589 aa18.04■□□□□ 0.48
SFXN1-201ENST00000321442 FAM184BQ9ULE4 1060 aa18.04■□□□□ 0.48
SFXN1-201ENST00000321442 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.04■□□□□ 0.48
SFXN1-201ENST00000321442 PRCPP42785 496 aa18.04■□□□□ 0.48
SFXN1-201ENST00000321442 VPS41P49754 854 aa18.04■□□□□ 0.48
SFXN1-201ENST00000321442 NEK8Q86SG6 692 aa18.04■□□□□ 0.48
SFXN1-201ENST00000321442 MB21D1Q8N884 522 aa18.04■□□□□ 0.48
SFXN1-201ENST00000321442 FAM169AQ9Y6X4 670 aa18.04■□□□□ 0.48
SFXN1-201ENST00000321442 GRIN1Q05586 938 aa18.04■□□□□ 0.48
SFXN1-201ENST00000321442 COL9A3Q14050 684 aaPredicted RBP18.04■□□□□ 0.48
SFXN1-201ENST00000321442 VSIG1Q86XK7 387 aa18.04■□□□□ 0.48
SFXN1-201ENST00000321442 MICAL1Q8TDZ2 1067 aa18.04■□□□□ 0.48
SFXN1-201ENST00000321442 FHOD1Q9Y613 1164 aa18.04■□□□□ 0.48
SFXN1-201ENST00000321442 MROH7-TTC4A0A0A0MT08 1334 aa18.04■□□□□ 0.48
SFXN1-201ENST00000321442 RGS16O15492 202 aaPredicted RBP18.03■□□□□ 0.48
SFXN1-201ENST00000321442 GCNT3O95395 438 aa18.03■□□□□ 0.48
SFXN1-201ENST00000321442 TADA2BQ86TJ2 420 aa18.03■□□□□ 0.48
SFXN1-201ENST00000321442 LY9Q9HBG7 655 aa18.03■□□□□ 0.48
SFXN1-201ENST00000321442 TRIM10Q9UDY6 481 aa18.03■□□□□ 0.48
SFXN1-201ENST00000321442 UBE2Q2LH0YL09 131 aa18.03■□□□□ 0.48
SFXN1-201ENST00000321442 DDX39AO00148 427 aaKnown RBP18.03■□□□□ 0.48
SFXN1-201ENST00000321442 BBOX1O75936 387 aa18.03■□□□□ 0.48
SFXN1-201ENST00000321442 SETDB1Q15047 1291 aa18.03■□□□□ 0.48
SFXN1-201ENST00000321442 INTS8Q75QN2 995 aaKnown RBP18.03■□□□□ 0.48
SFXN1-201ENST00000321442 LEMD3Q9Y2U8 911 aa18.03■□□□□ 0.48
SFXN1-201ENST00000321442 DCAF8L1A6NGE4 600 aa18.03■□□□□ 0.48
SFXN1-201ENST00000321442 SORBS3O60504 671 aa18.03■□□□□ 0.48
SFXN1-201ENST00000321442 NKX1-1Q15270 411 aaPredicted RBP18.03■□□□□ 0.48
SFXN1-201ENST00000321442 FAM26FQ5R3K3 315 aa18.03■□□□□ 0.48
SFXN1-201ENST00000321442 ARHGAP27Q6ZUM4 889 aa18.03■□□□□ 0.48
SFXN1-201ENST00000321442 KRT26Q7Z3Y9 468 aa18.03■□□□□ 0.48
SFXN1-201ENST00000321442 CCDC170Q8IYT3 715 aa18.03■□□□□ 0.48
SFXN1-201ENST00000321442 KIFC2Q96AC6 838 aa18.03■□□□□ 0.48
SFXN1-201ENST00000321442 NAP1L3Q99457 506 aaPredicted RBP18.03■□□□□ 0.48
SFXN1-201ENST00000321442 ARPP21Q9UBL0 812 aaPredicted RBP18.03■□□□□ 0.48
SFXN1-201ENST00000321442 ADAMTS1Q9UHI8 967 aa18.03■□□□□ 0.48
SFXN1-201ENST00000321442 PCDHA12Q9UN75 941 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms