RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 HDAC7Q8WUI4 952 aa18.2■□□□□ 0.5
PACS1-201ENST00000320580 IQCDQ96DY2 449 aa18.2■□□□□ 0.5
PACS1-201ENST00000320580 INTS13Q9NVM9 706 aa18.2■□□□□ 0.5
PACS1-201ENST00000320580 USP6P35125 1406 aa18.2■□□□□ 0.5
PACS1-201ENST00000320580 PRPHP41219 470 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 CCDC174Q6PII3 467 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 IP6K1Q92551 441 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 FGD4Q96M96 766 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 FBXL5Q9UKA1 691 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 CALML3P27482 149 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 PPP1R2P41236 205 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 CUL1Q13616 776 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 SLC4A8Q2Y0W8 1093 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 USP49Q70CQ1 688 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 ZC3H18Q86VM9 953 aaKnown RBP18.19■□□□□ 0.5
PACS1-201ENST00000320580 GBP7Q8N8V2 638 aaPredicted RBP18.19■□□□□ 0.5
PACS1-201ENST00000320580 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.19■□□□□ 0.5
PACS1-201ENST00000320580 SNRPA1P09661 255 aaKnown RBP18.19■□□□□ 0.5
PACS1-201ENST00000320580 PAPOLAP51003 745 aaKnown RBP18.19■□□□□ 0.5
PACS1-201ENST00000320580 PDE6CP51160 858 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 DYNC1I2Q13409 638 aaKnown RBP18.19■□□□□ 0.5
PACS1-201ENST00000320580 ZNF449Q6P9G9 518 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 DYMQ7RTS9 669 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 HEATR3Q7Z4Q2 680 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 UBAP1LF5GYI3 381 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 THEMIS2Q5TEJ8 643 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 PHLDB3Q6NSJ2 640 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 MAGEB6Q8N7X4 407 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 ETNK1Q9HBU6 452 aa18.19■□□□□ 0.5
PACS1-201ENST00000320580 PPLO60437 1756 aa18.18■□□□□ 0.5
PACS1-201ENST00000320580 CCND1P24385 295 aa18.18■□□□□ 0.5
PACS1-201ENST00000320580 POLR2FP61218 127 aaKnown RBP18.18■□□□□ 0.5
PACS1-201ENST00000320580 CUL4BQ13620 913 aa18.18■□□□□ 0.5
PACS1-201ENST00000320580 ANKRD20A8PQ5CZ79 823 aa18.18■□□□□ 0.5
PACS1-201ENST00000320580 PTPRUQ92729 1446 aa18.18■□□□□ 0.5
PACS1-201ENST00000320580 FMO2Q99518 471 aa18.18■□□□□ 0.5
PACS1-201ENST00000320580 VAT1LQ9HCJ6 419 aa18.18■□□□□ 0.5
PACS1-201ENST00000320580 A1CFQ9NQ94 594 aaKnown RBP18.18■□□□□ 0.5
PACS1-201ENST00000320580 PACSIN2Q9UNF0 486 aaPredicted RBP18.18■□□□□ 0.5
PACS1-201ENST00000320580 DUSP10Q9Y6W6 482 aa18.18■□□□□ 0.5
PACS1-201ENST00000320580 TSPY2A6NKD2 308 aa18.18■□□□□ 0.5
PACS1-201ENST00000320580 PALMO75781 387 aa18.18■□□□□ 0.5
PACS1-201ENST00000320580 BAG2O95816 211 aa18.18■□□□□ 0.5
PACS1-201ENST00000320580 GDAP1Q8TB36 358 aa18.18■□□□□ 0.5
PACS1-201ENST00000320580 LSM14BQ9BX40 385 aaKnown RBP18.18■□□□□ 0.5
PACS1-201ENST00000320580 LARSQ9P2J5 1176 aaKnown RBP18.18■□□□□ 0.5
PACS1-201ENST00000320580 RTL9Q8NET4 1388 aa18.18■□□□□ 0.5
PACS1-201ENST00000320580 PGRMC1O00264 195 aaKnown RBP18.18■□□□□ 0.5
PACS1-201ENST00000320580 PRPF6O94906 941 aaKnown RBP18.18■□□□□ 0.5
PACS1-201ENST00000320580 MED23Q9ULK4 1368 aa18.18■□□□□ 0.5
PACS1-201ENST00000320580 OPLAHO14841 1288 aa18.17■□□□□ 0.5
PACS1-201ENST00000320580 OTUD6AQ7L8S5 288 aa18.17■□□□□ 0.5
PACS1-201ENST00000320580 TMEM139Q8IV31 216 aa18.17■□□□□ 0.5
PACS1-201ENST00000320580 FOXP4Q8IVH2 680 aaPredicted RBP18.17■□□□□ 0.5
PACS1-201ENST00000320580 MLXIPLQ9NP71 852 aa18.17■□□□□ 0.5
PACS1-201ENST00000320580 SKOR1P84550 965 aa18.17■□□□□ 0.5
PACS1-201ENST00000320580 CCDC105Q8IYK2 499 aa18.17■□□□□ 0.5
PACS1-201ENST00000320580 ZNF654Q8IZM8 581 aa18.17■□□□□ 0.5
PACS1-201ENST00000320580 NEK9Q8TD19 979 aa18.17■□□□□ 0.5
PACS1-201ENST00000320580 ATP7BP35670 1465 aa18.17■□□□□ 0.5
PACS1-201ENST00000320580 IQGAP1P46940 1657 aa18.17■□□□□ 0.5
PACS1-201ENST00000320580 CIB2O75838 187 aa18.17■□□□□ 0.5
PACS1-201ENST00000320580 FYB2Q5VWT5 728 aa18.17■□□□□ 0.5
PACS1-201ENST00000320580 SV2BQ7L1I2 683 aa18.17■□□□□ 0.5
PACS1-201ENST00000320580 TSEN2Q8NCE0 465 aaKnown RBP18.17■□□□□ 0.5
PACS1-201ENST00000320580 MTUS1Q9ULD2 1270 aa18.17■□□□□ 0.5
PACS1-201ENST00000320580 C15orf41Q9Y2V0 281 aa18.17■□□□□ 0.5
PACS1-201ENST00000320580 VWA3BQ502W6 1294 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 TTMPQ5BVD1 217 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 CEP63Q96MT8 703 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 LACRTQ9GZZ8 138 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 ARMT1Q9H993 441 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 AGPAT5Q9NUQ2 364 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 TXLNGQ9NUQ3 528 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 ZFATQ9P243 1243 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 AMFRQ9UKV5 643 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.16■□□□□ 0.5
PACS1-201ENST00000320580 ITIH6Q6UXX5 1313 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 MYO5BQ9ULV0 1848 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 RNMTO43148 476 aaKnown RBP18.16■□□□□ 0.5
PACS1-201ENST00000320580 MSH2P43246 934 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 EIF3BP55884 814 aaKnown RBP18.16■□□□□ 0.5
PACS1-201ENST00000320580 GRIN1Q05586 938 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 PAPD7Q5XG87 772 aaKnown RBP18.16■□□□□ 0.5
PACS1-201ENST00000320580 TMEM154Q6P9G4 183 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 SPATA24Q86W54 205 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 FANCBQ8NB91 859 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 MDM1Q8TC05 714 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 TBC1D5Q92609 795 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 SPDYE3A6NKU9 549 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 FMNL1O95466 1100 aaPredicted RBP18.16■□□□□ 0.5
PACS1-201ENST00000320580 ABL1P00519 1130 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 PRCPP42785 496 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 TRPM8Q7Z2W7 1104 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 ILDR1Q86SU0 546 aaPredicted RBP18.16■□□□□ 0.5
PACS1-201ENST00000320580 ZNF513Q8N8E2 541 aaPredicted RBP18.16■□□□□ 0.5
PACS1-201ENST00000320580 DDX47Q9H0S4 455 aaKnown RBP18.16■□□□□ 0.5
PACS1-201ENST00000320580 SLC39A2Q9NP94 309 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 AATFQ9NY61 560 aaKnown RBP eCLIP18.16■□□□□ 0.5
PACS1-201ENST00000320580 ASIC3Q9UHC3 531 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms