RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 TDP2O95551 362 aa20.49■□□□□ 0.87
SHISA3-201ENST00000319234 TECP42680 631 aa20.49■□□□□ 0.87
SHISA3-201ENST00000319234 ERCC6LQ2NKX8 1250 aa20.49■□□□□ 0.87
SHISA3-201ENST00000319234 APTXQ7Z2E3 356 aaKnown RBP20.49■□□□□ 0.87
SHISA3-201ENST00000319234 CDAN1Q8IWY9 1227 aa20.49■□□□□ 0.87
SHISA3-201ENST00000319234 IGSF22Q8N9C0 903 aa20.49■□□□□ 0.87
SHISA3-201ENST00000319234 ACER1Q8TDN7 264 aa20.49■□□□□ 0.87
SHISA3-201ENST00000319234 CUEDC2Q9H467 287 aa20.49■□□□□ 0.87
SHISA3-201ENST00000319234 GOPCQ9HD26 462 aa20.49■□□□□ 0.87
SHISA3-201ENST00000319234 AKR1B15C9JRZ8 316 aaPredicted RBP20.48■□□□□ 0.87
SHISA3-201ENST00000319234 ECE1P42892 770 aa20.48■□□□□ 0.87
SHISA3-201ENST00000319234 HSP90AA4PQ58FG1 418 aa20.48■□□□□ 0.87
SHISA3-201ENST00000319234 MIGA2Q7L4E1 593 aa20.48■□□□□ 0.87
SHISA3-201ENST00000319234 FBXO11Q86XK2 927 aa20.48■□□□□ 0.87
SHISA3-201ENST00000319234 MNS1Q8NEH6 495 aa20.48■□□□□ 0.87
SHISA3-201ENST00000319234 NAP1L4Q99733 375 aaKnown RBP20.48■□□□□ 0.87
SHISA3-201ENST00000319234 RMND1Q9NWS8 449 aa20.48■□□□□ 0.87
SHISA3-201ENST00000319234 EFCAB8A8MWE9 144 aa20.48■□□□□ 0.87
SHISA3-201ENST00000319234 SLC37A4O43826 429 aa20.48■□□□□ 0.87
SHISA3-201ENST00000319234 MYL1P05976 194 aa20.48■□□□□ 0.87
SHISA3-201ENST00000319234 CAP2P40123 477 aa20.48■□□□□ 0.87
SHISA3-201ENST00000319234 TXKP42681 527 aa20.48■□□□□ 0.87
SHISA3-201ENST00000319234 FXR2P51116 673 aaKnown RBP eCLIP20.48■□□□□ 0.87
SHISA3-201ENST00000319234 FILIP1LQ4L180 1135 aa20.48■□□□□ 0.87
SHISA3-201ENST00000319234 MCTP2Q6DN12 878 aa20.48■□□□□ 0.87
SHISA3-201ENST00000319234 UBXN4Q92575 508 aa20.48■□□□□ 0.87
SHISA3-201ENST00000319234 MAGEF1Q9HAY2 307 aa20.48■□□□□ 0.87
SHISA3-201ENST00000319234 URI1O94763 535 aaPredicted RBP20.47■□□□□ 0.87
SHISA3-201ENST00000319234 GCFC2P16383 781 aaKnown RBP20.47■□□□□ 0.87
SHISA3-201ENST00000319234 PBX1P40424 430 aa20.47■□□□□ 0.87
SHISA3-201ENST00000319234 ADKP55263 362 aaKnown RBP20.47■□□□□ 0.87
SHISA3-201ENST00000319234 TMEM266Q2M3C6 531 aa20.47■□□□□ 0.87
SHISA3-201ENST00000319234 SPICE1Q8N0Z3 855 aa20.47■□□□□ 0.87
SHISA3-201ENST00000319234 ARGLU1Q9NWB6 273 aaPredicted RBP20.47■□□□□ 0.87
SHISA3-201ENST00000319234 ADD3Q9UEY8 706 aaKnown RBP20.47■□□□□ 0.87
SHISA3-201ENST00000319234 PPP1R3GB7ZBB8 358 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 USP17L15C9J2P7 530 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 USP17L13C9JLJ4 530 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 USP17L11C9JVI0 530 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 USP17L18D6R9N7 530 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 USP17L22D6RA61 530 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 USP17L17D6RBQ6 530 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 USP17L19D6RCP7 530 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 USP17L20D6RJB6 530 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 TADA3O75528 432 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 RPN1P04843 607 aaKnown RBP20.46■□□□□ 0.87
SHISA3-201ENST00000319234 CD44P16070 742 aaKnown RBP20.46■□□□□ 0.87
SHISA3-201ENST00000319234 CASQ1P31415 396 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 SNAP25P60880 206 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 USP17L24Q0WX57 530 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 USP17L6PQ6QN14 398 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 KBTBD4Q9NVX7 518 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 PRR12Q9ULL5 1215 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 ITIH6Q6UXX5 1313 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 AP3B2Q13367 1082 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 PDIA5Q14554 519 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 RASA3Q14644 834 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 BMS1Q14692 1282 aaKnown RBP20.46■□□□□ 0.87
SHISA3-201ENST00000319234 PTPN21Q16825 1174 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 KIAA1755Q5JYT7 1200 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 PPFIBP1Q86W92 1011 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 CCDC51Q96ER9 411 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 PKNOX2Q96KN3 472 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 PLIN2Q99541 437 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 RAB34Q9BZG1 259 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 SH2D4AQ9H788 454 aa20.46■□□□□ 0.87
SHISA3-201ENST00000319234 DDX25Q9UHL0 483 aaKnown RBP20.46■□□□□ 0.87
SHISA3-201ENST00000319234 FANCGO15287 622 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 PLCG1P19174 1290 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 USP11P51784 963 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 STAT2P52630 851 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 TNFAIP1Q13829 316 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 ARHGAP29Q52LW3 1261 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 TOGARAM2Q6ZUX3 1019 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 MMTAG2Q9BU76 263 aaKnown RBP20.45■□□□□ 0.86
SHISA3-201ENST00000319234 LRWD1Q9UFC0 647 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 FZD9O00144 591 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 MEIS2O14770 477 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 KIF20AO95235 890 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 CCDC175P0C221 793 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 PTGER2P43116 358 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 MAP3K9P80192 1104 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 RASSF7Q02833 373 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 SPAG1Q07617 926 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 SEMA3FQ13275 785 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 ZNF658Q5TYW1 1059 aaPredicted RBP20.45■□□□□ 0.86
SHISA3-201ENST00000319234 LRRN4CLQ8ND94 238 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 CALML4Q96GE6 196 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 ANO3Q9BYT9 981 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 VCPKMTQ9H867 229 aa20.45■□□□□ 0.86
SHISA3-201ENST00000319234 GMPSP49915 693 aaPredicted RBP20.44■□□□□ 0.86
SHISA3-201ENST00000319234 GNG11P61952 73 aa20.44■□□□□ 0.86
SHISA3-201ENST00000319234 TRAF1Q13077 416 aa20.44■□□□□ 0.86
SHISA3-201ENST00000319234 FAM83BQ5T0W9 1011 aa20.44■□□□□ 0.86
SHISA3-201ENST00000319234 KLHL10Q6JEL2 608 aa20.44■□□□□ 0.86
SHISA3-201ENST00000319234 LRRC15Q8TF66 581 aa20.44■□□□□ 0.86
SHISA3-201ENST00000319234 ASNSP08243 561 aa20.43■□□□□ 0.86
SHISA3-201ENST00000319234 KCNB1Q14721 858 aa20.43■□□□□ 0.86
SHISA3-201ENST00000319234 USH1GQ495M9 461 aa20.43■□□□□ 0.86
SHISA3-201ENST00000319234 CNGA4Q8IV77 575 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms