RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 SCN9AQ15858 1988 aa17.49■□□□□ 0.39
TSC22D3-201ENST00000315660 RAD21O60216 631 aa17.49■□□□□ 0.39
TSC22D3-201ENST00000315660 FCER1AP12319 257 aa17.49■□□□□ 0.39
TSC22D3-201ENST00000315660 EEF2P13639 858 aaKnown RBP17.49■□□□□ 0.39
TSC22D3-201ENST00000315660 GCFC2P16383 781 aaKnown RBP17.49■□□□□ 0.39
TSC22D3-201ENST00000315660 KRT9P35527 623 aa17.49■□□□□ 0.39
TSC22D3-201ENST00000315660 MB21D1Q8N884 522 aa17.49■□□□□ 0.39
TSC22D3-201ENST00000315660 LRRC27Q9C0I9 530 aa17.49■□□□□ 0.39
TSC22D3-201ENST00000315660 NYAP2Q9P242 653 aa17.49■□□□□ 0.39
TSC22D3-201ENST00000315660 DDX25Q9UHL0 483 aaKnown RBP17.49■□□□□ 0.39
TSC22D3-201ENST00000315660 FHOD1Q9Y613 1164 aa17.49■□□□□ 0.39
TSC22D3-201ENST00000315660 POTEMA6NI47 508 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 KIF5CO60282 957 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 MARCH6O60337 910 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 SLC1A4P43007 532 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 COBLL1Q53SF7 1204 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 ZNF507Q8TCN5 953 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 DCAF4Q8WV16 495 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 UBXN4Q92575 508 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 LARP4BQ92615 738 aaKnown RBP17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 LZTFL1Q9NQ48 299 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 ST7Q9NRC1 585 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 SLX4Q8IY92 1834 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 NPM3O75607 178 aaKnown RBP17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 DNM2P50570 870 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 MCM6Q14566 821 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 TSR1Q2NL82 804 aaKnown RBP17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 ZNF772Q68DY9 489 aaPredicted RBP17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 ANKRD40Q6AI12 368 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 SNX29Q8TEQ0 813 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 KIFC2Q96AC6 838 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 SERPINA10Q9UK55 444 aa17.48■□□□□ 0.39
TSC22D3-201ENST00000315660 PVALEFA0A1B0GWK0 134 aa17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 MYMKA6NI61 221 aa17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 CHRNA5P30532 468 aa17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 ERVK-24P63145 666 aa17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 QRICH1Q2TAL8 776 aa17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 SLFN13Q68D06 897 aa17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 TATDN1Q6P1N9 297 aa17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 KIAA0895Q8NCT3 520 aa17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 NUDT12Q9BQG2 462 aa17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 ATF5Q9Y2D1 282 aaPredicted RBP17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 PNMA6AP0CW24 399 aaPredicted RBP17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 HOXA7P31268 230 aaPredicted RBP17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 MAP3K9P80192 1104 aa17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 UNC13DQ70J99 1090 aa17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 HAS1Q92839 578 aa17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 HPS3Q969F9 1004 aa17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 TUBGCP2Q9BSJ2 902 aa17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 LUC7L2Q9Y383 392 aaKnown RBP17.47■□□□□ 0.39
TSC22D3-201ENST00000315660 ZNF646O15015 1829 aaPredicted RBP17.46■□□□□ 0.39
TSC22D3-201ENST00000315660 A0A0U1RQJ8 604 aa17.46■□□□□ 0.39
TSC22D3-201ENST00000315660 EFCAB8A8MWE9 144 aa17.46■□□□□ 0.39
TSC22D3-201ENST00000315660 SEPT2Q15019 361 aa17.46■□□□□ 0.39
TSC22D3-201ENST00000315660 AOC3Q16853 763 aa17.46■□□□□ 0.39
TSC22D3-201ENST00000315660 TMEM119Q4V9L6 283 aa17.46■□□□□ 0.39
TSC22D3-201ENST00000315660 TMCO3Q6UWJ1 677 aa17.46■□□□□ 0.39
TSC22D3-201ENST00000315660 SIAH1Q8IUQ4 282 aa17.46■□□□□ 0.39
TSC22D3-201ENST00000315660 OR8K1Q8NGG5 319 aa17.46■□□□□ 0.39
TSC22D3-201ENST00000315660 ATRIPQ8WXE1 791 aa17.46■□□□□ 0.39
TSC22D3-201ENST00000315660 RAD54LQ92698 747 aa17.46■□□□□ 0.39
TSC22D3-201ENST00000315660 CNKSR1Q969H4 720 aa17.46■□□□□ 0.39
TSC22D3-201ENST00000315660 CARD6Q9BX69 1037 aa17.46■□□□□ 0.39
TSC22D3-201ENST00000315660 TADA3O75528 432 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 ICA1Q05084 483 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 TMEM179Q6ZVK1 233 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 IRX2Q9BZI1 471 aaPredicted RBP17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 SLC39A2Q9NP94 309 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 PCDHA1Q9Y5I3 950 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 TTC26A0AVF1 554 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 B4DLN1 442 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 USP17L15C9J2P7 530 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 USP17L13C9JLJ4 530 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 USP17L11C9JVI0 530 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 USP17L18D6R9N7 530 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 USP17L22D6RA61 530 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 USP17L17D6RBQ6 530 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 USP17L19D6RCP7 530 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 USP17L20D6RJB6 530 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 USP17L24Q0WX57 530 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 CDC37Q16543 378 aaPredicted RBP17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 USP17L6PQ6QN14 398 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 KCNK18Q7Z418 384 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 ACRBPQ8NEB7 543 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 C7orf43Q8WVR3 580 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 EEF2KMTQ96G04 330 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 CNOT6LQ96LI5 555 aaKnown RBP17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 NUP58Q9BVL2 599 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 PCDHA12Q9UN75 941 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 MRFAP1Q9Y605 127 aa17.45■□□□□ 0.38
TSC22D3-201ENST00000315660 MTIF2P46199 727 aaKnown RBP17.44■□□□□ 0.38
TSC22D3-201ENST00000315660 DYMQ7RTS9 669 aa17.44■□□□□ 0.38
TSC22D3-201ENST00000315660 CAPN11Q9UMQ6 739 aa17.44■□□□□ 0.38
TSC22D3-201ENST00000315660 ZRANB2O95218 330 aaKnown RBP eCLIP17.44■□□□□ 0.38
TSC22D3-201ENST00000315660 GDF11O95390 407 aa17.44■□□□□ 0.38
TSC22D3-201ENST00000315660 TBC1D8BQ0IIM8 1120 aa17.44■□□□□ 0.38
TSC22D3-201ENST00000315660 CENPPQ6IPU0 288 aa17.44■□□□□ 0.38
TSC22D3-201ENST00000315660 RETREG2Q8NC44 543 aa17.44■□□□□ 0.38
TSC22D3-201ENST00000315660 GJA10Q969M2 543 aa17.44■□□□□ 0.38
TSC22D3-201ENST00000315660 SEMA6BQ9H3T3 888 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms