RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 TBC1D10BQ4KMP7 808 aaPredicted RBP18.9■□□□□ 0.62
GABRB3-202ENST00000311550 EPB41L5Q9HCM4 733 aa18.9■□□□□ 0.62
GABRB3-202ENST00000311550 TXNDC16Q9P2K2 825 aa18.9■□□□□ 0.62
GABRB3-202ENST00000311550 VGLL3A8MV65 326 aa18.89■□□□□ 0.62
GABRB3-202ENST00000311550 CLIC2O15247 247 aa18.89■□□□□ 0.62
GABRB3-202ENST00000311550 TEX33O43247 280 aa18.89■□□□□ 0.62
GABRB3-202ENST00000311550 CCT5P48643 541 aa18.89■□□□□ 0.62
GABRB3-202ENST00000311550 GPATCH4Q5T3I0 446 aaKnown RBP18.89■□□□□ 0.62
GABRB3-202ENST00000311550 AMNQ9BXJ7 453 aa18.89■□□□□ 0.62
GABRB3-202ENST00000311550 ZNF354CQ86Y25 554 aa18.89■□□□□ 0.61
GABRB3-202ENST00000311550 HEXIM1O94992 359 aaKnown RBP18.89■□□□□ 0.61
GABRB3-202ENST00000311550 ALDH3A1P30838 453 aa18.89■□□□□ 0.61
GABRB3-202ENST00000311550 ABCB5Q2M3G0 1257 aa18.89■□□□□ 0.61
GABRB3-202ENST00000311550 ODR4Q5SWX8 454 aa18.89■□□□□ 0.61
GABRB3-202ENST00000311550 WDR19Q8NEZ3 1342 aa18.89■□□□□ 0.61
GABRB3-202ENST00000311550 ARL6IP4Q66PJ3 421 aaKnown RBP18.89■□□□□ 0.61
GABRB3-202ENST00000311550 DPF2Q92785 391 aa18.89■□□□□ 0.61
GABRB3-202ENST00000311550 GINS2Q9Y248 185 aa18.89■□□□□ 0.61
GABRB3-202ENST00000311550 CAPN7Q9Y6W3 813 aa18.89■□□□□ 0.61
GABRB3-202ENST00000311550 NLRX1Q86UT6 975 aa18.88■□□□□ 0.61
GABRB3-202ENST00000311550 ZNF579Q8NAF0 562 aaKnown RBP18.88■□□□□ 0.61
GABRB3-202ENST00000311550 SREK1Q8WXA9 508 aaKnown RBP18.88■□□□□ 0.61
GABRB3-202ENST00000311550 SERPINB13Q9UIV8 391 aa18.88■□□□□ 0.61
GABRB3-202ENST00000311550 GDF11O95390 407 aa18.88■□□□□ 0.61
GABRB3-202ENST00000311550 XKR9Q5GH70 373 aa18.88■□□□□ 0.61
GABRB3-202ENST00000311550 NDST4Q9H3R1 872 aa18.88■□□□□ 0.61
GABRB3-202ENST00000311550 DKC1O60832 514 aaKnown RBP eCLIP18.88■□□□□ 0.61
GABRB3-202ENST00000311550 MYL1P05976 194 aa18.88■□□□□ 0.61
GABRB3-202ENST00000311550 KRT15P19012 456 aa18.88■□□□□ 0.61
GABRB3-202ENST00000311550 CDK8P49336 464 aa18.88■□□□□ 0.61
GABRB3-202ENST00000311550 PPP1R21Q6ZMI0 780 aa18.88■□□□□ 0.61
GABRB3-202ENST00000311550 SH3RF3Q8TEJ3 882 aaPredicted RBP18.88■□□□□ 0.61
GABRB3-202ENST00000311550 TMOD4Q9NZQ9 345 aa18.88■□□□□ 0.61
GABRB3-202ENST00000311550 STK17AQ9UEE5 414 aa18.88■□□□□ 0.61
GABRB3-202ENST00000311550 SLC7A5Q01650 507 aa18.88■□□□□ 0.61
GABRB3-202ENST00000311550 IQCB1Q15051 598 aa18.88■□□□□ 0.61
GABRB3-202ENST00000311550 PLCB1Q9NQ66 1216 aa18.88■□□□□ 0.61
GABRB3-202ENST00000311550 PALLDQ8WX93 1383 aa18.88■□□□□ 0.61
GABRB3-202ENST00000311550 PPFIA4O75335 1185 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 DLATP10515 647 aaKnown RBP18.87■□□□□ 0.61
GABRB3-202ENST00000311550 RIC8AQ9NPQ8 531 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 CASP8Q14790 479 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 SLC44A5Q8NCS7 719 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 CEP63Q96MT8 703 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 TRIM7Q9C029 511 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 LARSQ9P2J5 1176 aaKnown RBP18.87■□□□□ 0.61
GABRB3-202ENST00000311550 TBC1D8O95759 1140 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 GAS8O95995 478 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 KRT19P08727 400 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 KIF11P52732 1056 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 VSIG1Q86XK7 387 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 NCOA3Q9Y6Q9 1424 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 SRGAP2O75044 1071 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 NAA25Q14CX7 972 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 LRCH2Q5VUJ6 765 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 ABHD10Q9NUJ1 306 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 PCDHA13Q9Y5I0 950 aa18.87■□□□□ 0.61
GABRB3-202ENST00000311550 SERPINB2P05120 415 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 PDE6BP35913 854 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 PRCPP42785 496 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 KSR1Q8IVT5 923 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 TEKT3Q9BXF9 490 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 FAM184BQ9ULE4 1060 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 MINPP1Q9UNW1 487 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 MRPL11Q9Y3B7 192 aaKnown RBP18.86■□□□□ 0.61
GABRB3-202ENST00000311550 CDHR2Q9BYE9 1310 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 DLC1Q96QB1 1528 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 CROCCP2Q86T23 111 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 METTL16Q86W50 562 aaKnown RBP18.86■□□□□ 0.61
GABRB3-202ENST00000311550 DGKHQ86XP1 1220 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 CCDC170Q8IYT3 715 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 INO80Q9ULG1 1556 aaPredicted RBP18.86■□□□□ 0.61
GABRB3-202ENST00000311550 ZC3H13Q5T200 1668 aaKnown RBP18.86■□□□□ 0.61
GABRB3-202ENST00000311550 IFNB1P01574 187 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 CYP19A1P11511 503 aaPredicted RBP18.86■□□□□ 0.61
GABRB3-202ENST00000311550 CLUL1Q15846 466 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 PFKFB3Q16875 520 aaPredicted RBP18.86■□□□□ 0.61
GABRB3-202ENST00000311550 CELF1Q92879 486 aaKnown RBP18.86■□□□□ 0.61
GABRB3-202ENST00000311550 DBNDD1Q9H9R9 158 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 AFPP02771 609 aaKnown RBP18.86■□□□□ 0.61
GABRB3-202ENST00000311550 LLGL1Q15334 1064 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 FAM169AQ9Y6X4 670 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 REREQ9P2R6 1566 aa18.86■□□□□ 0.61
GABRB3-202ENST00000311550 NOP56O00567 594 aaKnown RBP18.85■□□□□ 0.61
GABRB3-202ENST00000311550 PPEF1O14829 653 aaPredicted RBP18.85■□□□□ 0.61
GABRB3-202ENST00000311550 LRRN2O75325 713 aa18.85■□□□□ 0.61
GABRB3-202ENST00000311550 MCTP2Q6DN12 878 aa18.85■□□□□ 0.61
GABRB3-202ENST00000311550 VPS37BQ9H9H4 285 aa18.85■□□□□ 0.61
GABRB3-202ENST00000311550 PP2D1A8MPX8 630 aa18.85■□□□□ 0.61
GABRB3-202ENST00000311550 APBA3O96018 575 aa18.85■□□□□ 0.61
GABRB3-202ENST00000311550 EMILIN3Q9NT22 766 aa18.85■□□□□ 0.61
GABRB3-202ENST00000311550 JRKLQ9Y4A0 524 aa18.85■□□□□ 0.61
GABRB3-202ENST00000311550 HHATQ5VTY9 493 aa18.85■□□□□ 0.61
GABRB3-202ENST00000311550 PLCD3Q8N3E9 789 aa18.85■□□□□ 0.61
GABRB3-202ENST00000311550 RIPOR2Q9Y4F9 1068 aa18.85■□□□□ 0.61
GABRB3-202ENST00000311550 CPDO75976 1380 aa18.85■□□□□ 0.61
GABRB3-202ENST00000311550 FOSP01100 380 aaPredicted RBP18.85■□□□□ 0.61
GABRB3-202ENST00000311550 FERP16591 822 aa18.85■□□□□ 0.61
GABRB3-202ENST00000311550 RSRC1Q96IZ7 334 aaKnown RBP18.85■□□□□ 0.61
GABRB3-202ENST00000311550 PARP2Q9UGN5 583 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms