RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 FAM114A1Q8IWE2 563 aa22.1■■□□□ 1.13
LRFN4-201ENST00000309602 SNX29Q8TEQ0 813 aa22.1■■□□□ 1.13
LRFN4-201ENST00000309602 GOLGA1Q92805 767 aa22.1■■□□□ 1.13
LRFN4-201ENST00000309602 CUL5Q93034 780 aa22.1■■□□□ 1.13
LRFN4-201ENST00000309602 ZSWIM4Q9H7M6 989 aa22.1■■□□□ 1.13
LRFN4-201ENST00000309602 DBNDD1Q9H9R9 158 aa22.1■■□□□ 1.13
LRFN4-201ENST00000309602 PCDHAC2Q9Y5I4 1007 aa22.1■■□□□ 1.13
LRFN4-201ENST00000309602 CTAGE9A4FU28 777 aa22.09■■□□□ 1.13
LRFN4-201ENST00000309602 ZBTB5O15062 677 aa22.09■■□□□ 1.13
LRFN4-201ENST00000309602 MTIF2P46199 727 aaKnown RBP22.09■■□□□ 1.13
LRFN4-201ENST00000309602 TBC1D8BQ0IIM8 1120 aa22.09■■□□□ 1.13
LRFN4-201ENST00000309602 PPP4R3AQ6IN85 833 aa22.09■■□□□ 1.13
LRFN4-201ENST00000309602 KCNK18Q7Z418 384 aa22.09■■□□□ 1.13
LRFN4-201ENST00000309602 RABGGTAQ92696 567 aa22.09■■□□□ 1.13
LRFN4-201ENST00000309602 RAD54LQ92698 747 aa22.09■■□□□ 1.13
LRFN4-201ENST00000309602 MTMR8Q96EF0 704 aa22.09■■□□□ 1.13
LRFN4-201ENST00000309602 RAB34Q9BZG1 259 aa22.09■■□□□ 1.13
LRFN4-201ENST00000309602 AGPAT5Q9NUQ2 364 aa22.09■■□□□ 1.13
LRFN4-201ENST00000309602 COL11A2P13942 1736 aaPredicted RBP22.09■■□□□ 1.13
LRFN4-201ENST00000309602 MYH4Q9Y623 1939 aa22.09■■□□□ 1.13
LRFN4-201ENST00000309602 PNMA6AP0CW24 399 aaPredicted RBP22.09■■□□□ 1.13
LRFN4-201ENST00000309602 CACNB3P54284 484 aa22.09■■□□□ 1.13
LRFN4-201ENST00000309602 CENPPQ6IPU0 288 aa22.09■■□□□ 1.13
LRFN4-201ENST00000309602 PVALEFA0A1B0GWK0 134 aa22.08■■□□□ 1.13
LRFN4-201ENST00000309602 FAM196BA6NMK8 535 aa22.08■■□□□ 1.13
LRFN4-201ENST00000309602 SEC31AO94979 1220 aaKnown RBP22.08■■□□□ 1.13
LRFN4-201ENST00000309602 SHROOM1Q2M3G4 852 aaPredicted RBP22.08■■□□□ 1.13
LRFN4-201ENST00000309602 KRT79Q5XKE5 535 aa22.08■■□□□ 1.13
LRFN4-201ENST00000309602 SRGAP1Q7Z6B7 1085 aa22.08■■□□□ 1.13
LRFN4-201ENST00000309602 HAS1Q92839 578 aa22.08■■□□□ 1.13
LRFN4-201ENST00000309602 GJA10Q969M2 543 aa22.08■■□□□ 1.13
LRFN4-201ENST00000309602 NOC4LQ9BVI4 516 aaKnown RBP22.08■■□□□ 1.13
LRFN4-201ENST00000309602 EHD4Q9H223 541 aa22.08■■□□□ 1.13
LRFN4-201ENST00000309602 DDX25Q9UHL0 483 aaKnown RBP22.08■■□□□ 1.13
LRFN4-201ENST00000309602 TMEM119Q4V9L6 283 aa22.08■■□□□ 1.12
LRFN4-201ENST00000309602 TRIM10Q9UDY6 481 aa22.08■■□□□ 1.12
LRFN4-201ENST00000309602 PUF60Q9UHX1 559 aaKnown RBP22.08■■□□□ 1.12
LRFN4-201ENST00000309602 TRIM21P19474 475 aaKnown RBP22.07■■□□□ 1.12
LRFN4-201ENST00000309602 PDE6BP35913 854 aa22.07■■□□□ 1.12
LRFN4-201ENST00000309602 MRPL12P52815 198 aaKnown RBP22.07■■□□□ 1.12
LRFN4-201ENST00000309602 CHMP4BP1P59074 171 aa22.07■■□□□ 1.12
LRFN4-201ENST00000309602 ECM1Q16610 540 aa22.07■■□□□ 1.12
LRFN4-201ENST00000309602 MEA1Q16626 185 aa22.07■■□□□ 1.12
LRFN4-201ENST00000309602 MASTLQ96GX5 879 aa22.07■■□□□ 1.12
LRFN4-201ENST00000309602 NAPGQ99747 312 aaPredicted RBP22.07■■□□□ 1.12
LRFN4-201ENST00000309602 PARD6BQ9BYG5 372 aa22.07■■□□□ 1.12
LRFN4-201ENST00000309602 PSTPIP2Q9H939 334 aa22.07■■□□□ 1.12
LRFN4-201ENST00000309602 MYO1AQ9UBC5 1043 aa22.07■■□□□ 1.12
LRFN4-201ENST00000309602 TFRCP02786 760 aaKnown RBP22.07■■□□□ 1.12
LRFN4-201ENST00000309602 MMP10P09238 476 aa22.07■■□□□ 1.12
LRFN4-201ENST00000309602 TCP10Q12799 353 aa22.07■■□□□ 1.12
LRFN4-201ENST00000309602 TSR1Q2NL82 804 aaKnown RBP22.07■■□□□ 1.12
LRFN4-201ENST00000309602 UTP14CQ5TAP6 766 aaKnown RBP22.07■■□□□ 1.12
LRFN4-201ENST00000309602 ZSCAN29Q8IWY8 852 aaPredicted RBP22.07■■□□□ 1.12
LRFN4-201ENST00000309602 CCDC17Q96LX7 622 aa22.07■■□□□ 1.12
LRFN4-201ENST00000309602 ZDHHC15Q96MV8 337 aa22.07■■□□□ 1.12
LRFN4-201ENST00000309602 RGS17Q9UGC6 210 aaPredicted RBP22.07■■□□□ 1.12
LRFN4-201ENST00000309602 HERVK_113P62684 666 aa22.06■■□□□ 1.12
LRFN4-201ENST00000309602 AKT1S1Q96B36 256 aa22.06■■□□□ 1.12
LRFN4-201ENST00000309602 NUP58Q9BVL2 599 aa22.06■■□□□ 1.12
LRFN4-201ENST00000309602 ST7Q9NRC1 585 aa22.06■■□□□ 1.12
LRFN4-201ENST00000309602 MYH7BA7E2Y1 1941 aa22.06■■□□□ 1.12
LRFN4-201ENST00000309602 KIAA0825Q8IV33 1275 aa22.06■■□□□ 1.12
LRFN4-201ENST00000309602 CEP112Q8N8E3 955 aa22.06■■□□□ 1.12
LRFN4-201ENST00000309602 RETREG2Q8NC44 543 aa22.06■■□□□ 1.12
LRFN4-201ENST00000309602 DDX12PQ92771 950 aa22.06■■□□□ 1.12
LRFN4-201ENST00000309602 ATF5Q9Y2D1 282 aaPredicted RBP22.06■■□□□ 1.12
LRFN4-201ENST00000309602 DDTLA6NHG4 134 aaPredicted RBP22.05■■□□□ 1.12
LRFN4-201ENST00000309602 IDEP14735 1019 aa22.05■■□□□ 1.12
LRFN4-201ENST00000309602 GABPB1Q06547 395 aaPredicted RBP22.05■■□□□ 1.12
LRFN4-201ENST00000309602 TUBB2AQ13885 445 aa22.05■■□□□ 1.12
LRFN4-201ENST00000309602 CC2D1AQ6P1N0 951 aaPredicted RBP22.05■■□□□ 1.12
LRFN4-201ENST00000309602 ERGIC2Q96RQ1 377 aa22.05■■□□□ 1.12
LRFN4-201ENST00000309602 TUBB2BQ9BVA1 445 aa22.05■■□□□ 1.12
LRFN4-201ENST00000309602 TMX4Q9H1E5 349 aaPredicted RBP22.05■■□□□ 1.12
LRFN4-201ENST00000309602 GUCA1BQ9UMX6 200 aa22.05■■□□□ 1.12
LRFN4-201ENST00000309602 SIPA1L1O43166 1804 aa22.05■■□□□ 1.12
LRFN4-201ENST00000309602 RAD21O60216 631 aa22.05■■□□□ 1.12
LRFN4-201ENST00000309602 EEF2P13639 858 aaKnown RBP22.05■■□□□ 1.12
LRFN4-201ENST00000309602 PODNQ7Z5L7 613 aa22.05■■□□□ 1.12
LRFN4-201ENST00000309602 GUF1Q8N442 669 aaKnown RBP22.05■■□□□ 1.12
LRFN4-201ENST00000309602 ZNF622Q969S3 477 aaKnown RBP eCLIP22.05■■□□□ 1.12
LRFN4-201ENST00000309602 PCMTD1Q96MG8 357 aaPredicted RBP22.05■■□□□ 1.12
LRFN4-201ENST00000309602 TFR2Q9UP52 801 aa22.05■■□□□ 1.12
LRFN4-201ENST00000309602 PLA2G4AP47712 749 aa22.04■■□□□ 1.12
LRFN4-201ENST00000309602 ZBED6P86452 979 aa22.04■■□□□ 1.12
LRFN4-201ENST00000309602 EHHADHQ08426 723 aa22.04■■□□□ 1.12
LRFN4-201ENST00000309602 QRICH1Q2TAL8 776 aa22.04■■□□□ 1.12
LRFN4-201ENST00000309602 GLIS3Q8NEA6 775 aa22.04■■□□□ 1.12
LRFN4-201ENST00000309602 FAM198AQ9UFP1 575 aa22.04■■□□□ 1.12
LRFN4-201ENST00000309602 PRDM4Q9UKN5 801 aa22.04■■□□□ 1.12
LRFN4-201ENST00000309602 USP17L15C9J2P7 530 aa22.04■■□□□ 1.12
LRFN4-201ENST00000309602 USP17L13C9JLJ4 530 aa22.04■■□□□ 1.12
LRFN4-201ENST00000309602 USP17L11C9JVI0 530 aa22.04■■□□□ 1.12
LRFN4-201ENST00000309602 USP17L18D6R9N7 530 aa22.04■■□□□ 1.12
LRFN4-201ENST00000309602 USP17L22D6RA61 530 aa22.04■■□□□ 1.12
LRFN4-201ENST00000309602 USP17L17D6RBQ6 530 aa22.04■■□□□ 1.12
LRFN4-201ENST00000309602 USP17L19D6RCP7 530 aa22.04■■□□□ 1.12
LRFN4-201ENST00000309602 USP17L20D6RJB6 530 aa22.04■■□□□ 1.12
LRFN4-201ENST00000309602 USP17L24Q0WX57 530 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms