RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 SCN5AQ14524 2016 aa11.02□□□□□ -0.64
CNOT9-202ENST00000295701 REV3LO60673 3130 aa11.02□□□□□ -0.64
CNOT9-202ENST00000295701 CHD7Q9P2D1 2997 aa11.02□□□□□ -0.64
CNOT9-202ENST00000295701 LRRC37A2A6NM11 1700 aa11.02□□□□□ -0.65
CNOT9-202ENST00000295701 TMEM265A0A087WTH1 108 aa11.02□□□□□ -0.65
CNOT9-202ENST00000295701 DYNC1LI2O43237 492 aaPredicted RBP11.02□□□□□ -0.65
CNOT9-202ENST00000295701 SMPD1P17405 629 aa11.02□□□□□ -0.65
CNOT9-202ENST00000295701 SLC1A4P43007 532 aa11.02□□□□□ -0.65
CNOT9-202ENST00000295701 STAT2P52630 851 aa11.02□□□□□ -0.65
CNOT9-202ENST00000295701 OAZ1P54368 228 aa11.02□□□□□ -0.65
CNOT9-202ENST00000295701 PDE4BQ07343 736 aa11.02□□□□□ -0.65
CNOT9-202ENST00000295701 IKQ13123 557 aaPredicted RBP11.02□□□□□ -0.65
CNOT9-202ENST00000295701 PPIGQ13427 754 aaKnown RBP eCLIP11.02□□□□□ -0.651e-6■■■□□ 15.5
CNOT9-202ENST00000295701 RASIP1Q5U651 963 aa11.02□□□□□ -0.65
CNOT9-202ENST00000295701 TTBK2Q6IQ55 1244 aa11.02□□□□□ -0.65
CNOT9-202ENST00000295701 FBXO16Q8IX29 292 aaPredicted RBP11.02□□□□□ -0.65
CNOT9-202ENST00000295701 FSD1Q9BTV5 496 aa11.02□□□□□ -0.65
CNOT9-202ENST00000295701 CXXC1Q9P0U4 656 aaPredicted RBP11.02□□□□□ -0.65
CNOT9-202ENST00000295701 FBXO40Q9UH90 709 aa11.02□□□□□ -0.65
CNOT9-202ENST00000295701 GNEQ9Y223 722 aaKnown RBP11.02□□□□□ -0.65
CNOT9-202ENST00000295701 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.02□□□□□ -0.65
CNOT9-202ENST00000295701 TCF20Q9UGU0 1960 aaKnown RBP11.02□□□□□ -0.65
CNOT9-202ENST00000295701 TTC28Q96AY4 2481 aa11.02□□□□□ -0.65
CNOT9-202ENST00000295701 PLIN4Q96Q06 1357 aa11.02□□□□□ -0.65
CNOT9-202ENST00000295701 CCL23P55773 120 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 PSMC6P62333 389 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 NKX3-2P78367 333 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 VPS53Q5VIR6 699 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 RCSD1Q6JBY9 416 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 TAPT1Q6NXT6 567 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 FAM160B2Q86V87 743 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 SLC43A3Q8NBI5 491 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 PPP1R13LQ8WUF5 828 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 CHURC1Q8WUH1 139 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 GMCL1Q96IK5 515 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 NACAP1Q9BZK3 213 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 TRPV6Q9H1D0 765 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 PRDM12Q9H4Q4 367 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 IL21Q9HBE4 155 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 ZNF287Q9HBT7 754 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 PRR12Q9ULL5 1215 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 STX8Q9UNK0 236 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 MROH7Q68CQ1 1323 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 MUC3AQ02505 3323 aa11.01□□□□□ -0.65
CNOT9-202ENST00000295701 TRIP12Q14669 1992 aaPredicted RBP11□□□□□ -0.65
CNOT9-202ENST00000295701 RBAK-RBAKDNI3L0D1 243 aa11□□□□□ -0.65
CNOT9-202ENST00000295701 TLR3O15455 904 aaKnown RBP11□□□□□ -0.65
CNOT9-202ENST00000295701 SLC16A2P36021 539 aa11□□□□□ -0.65
CNOT9-202ENST00000295701 ITGA7Q13683 1181 aa11□□□□□ -0.65
CNOT9-202ENST00000295701 ADGRE1Q14246 886 aa11□□□□□ -0.65
CNOT9-202ENST00000295701 SMYD5Q6GMV2 418 aa11□□□□□ -0.65
CNOT9-202ENST00000295701 TLK2Q86UE8 772 aa11□□□□□ -0.65
CNOT9-202ENST00000295701 TMEM199Q8N511 208 aa11□□□□□ -0.65
CNOT9-202ENST00000295701 VWCEQ96DN2 955 aa11□□□□□ -0.65
CNOT9-202ENST00000295701 NKX2-4Q9H2Z4 354 aa11□□□□□ -0.65
CNOT9-202ENST00000295701 IL23AQ9NPF7 189 aa11□□□□□ -0.65
CNOT9-202ENST00000295701 CYP39A1Q9NYL5 469 aa11□□□□□ -0.65
CNOT9-202ENST00000295701 SYNPO2Q9UMS6 1093 aa11□□□□□ -0.65
CNOT9-202ENST00000295701 TET1Q8NFU7 2136 aa11□□□□□ -0.65
CNOT9-202ENST00000295701 ASB14A6NK59 587 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 TSPY2A6NKD2 308 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 B4GALT4O60513 344 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 FDX1P10109 184 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 MYOGP15173 224 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 RABGGTBP53611 331 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 BAATQ14032 418 aaPredicted RBP10.99□□□□□ -0.65
CNOT9-202ENST00000295701 CCDC85BQ15834 202 aaPredicted RBP10.99□□□□□ -0.65
CNOT9-202ENST00000295701 FSCN1Q16658 493 aaKnown RBP10.99□□□□□ -0.65
CNOT9-202ENST00000295701 TKFCQ3LXA3 575 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 NSMFQ6X4W1 530 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 KIAA1211Q6ZU35 1233 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 OTOP2Q7RTS6 562 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 HERVK_113Q902F9 699 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 SCLYQ96I15 445 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 AP5M1Q9H0R1 490 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 WNT8AQ9H1J5 351 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 HIPK3Q9H422 1215 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 CCPG1Q9ULG6 757 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 YBX2Q9Y2T7 364 aaKnown RBP10.99□□□□□ -0.65
CNOT9-202ENST00000295701 TTC41PQ6P2S7 1318 aa10.99□□□□□ -0.65
CNOT9-202ENST00000295701 ERC2O15083 957 aa10.98□□□□□ -0.65
CNOT9-202ENST00000295701 RANBP6O60518 1105 aaKnown RBP10.98□□□□□ -0.65
CNOT9-202ENST00000295701 PLA2G6O60733 806 aa10.98□□□□□ -0.65
CNOT9-202ENST00000295701 FGBP02675 491 aa10.98□□□□□ -0.65
CNOT9-202ENST00000295701 SLC3A2P08195 630 aaKnown RBP10.98□□□□□ -0.65
CNOT9-202ENST00000295701 CCDC96Q2M329 555 aa10.98□□□□□ -0.65
CNOT9-202ENST00000295701 IQSEC1Q6DN90 963 aa10.98□□□□□ -0.65
CNOT9-202ENST00000295701 PSRC1Q6PGN9 363 aaPredicted RBP10.98□□□□□ -0.65
CNOT9-202ENST00000295701 GAS2L1Q99501 681 aaPredicted RBP10.98□□□□□ -0.65
CNOT9-202ENST00000295701 NOC4LQ9BVI4 516 aaKnown RBP10.98□□□□□ -0.65
CNOT9-202ENST00000295701 GPCPD1Q9NPB8 672 aa10.98□□□□□ -0.65
CNOT9-202ENST00000295701 FRMPD2Q68DX3 1309 aaPredicted RBP10.98□□□□□ -0.65
CNOT9-202ENST00000295701 SALL3Q9BXA9 1300 aa10.98□□□□□ -0.65
CNOT9-202ENST00000295701 NFIBO00712 420 aa10.97□□□□□ -0.65
CNOT9-202ENST00000295701 CYP2C9P11712 490 aa10.97□□□□□ -0.65
CNOT9-202ENST00000295701 MX1P20591 662 aa10.97□□□□□ -0.65
CNOT9-202ENST00000295701 IGFBP4P22692 258 aa10.97□□□□□ -0.65
CNOT9-202ENST00000295701 NOVP48745 357 aa10.97□□□□□ -0.65
CNOT9-202ENST00000295701 LRRFIP1Q32MZ4 808 aaKnown RBP10.97□□□□□ -0.65
CNOT9-202ENST00000295701 RRP12Q5JTH9 1297 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms