RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 KIAA0895Q8NCT3 520 aa22.35■■□□□ 1.17
CXCL16-201ENST00000293778 RAD54LQ92698 747 aa22.35■■□□□ 1.17
CXCL16-201ENST00000293778 TUBGCP2Q9BSJ2 902 aa22.35■■□□□ 1.17
CXCL16-201ENST00000293778 SERPINA10Q9UK55 444 aa22.35■■□□□ 1.17
CXCL16-201ENST00000293778 SLX4Q8IY92 1834 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 PVALEFA0A1B0GWK0 134 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 SPDYE4A6NLX3 237 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 TATDN1Q6P1N9 297 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 UNC13DQ70J99 1090 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 HPS3Q969F9 1004 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 IRX2Q9BZI1 471 aaPredicted RBP22.34■■□□□ 1.17
CXCL16-201ENST00000293778 GLT8D2Q9H1C3 349 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 ATF5Q9Y2D1 282 aaPredicted RBP22.34■■□□□ 1.17
CXCL16-201ENST00000293778 A0A0U1RQJ8 604 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 TTC26A0AVF1 554 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 KIF5CO60282 957 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 NPM3O75607 178 aaKnown RBP22.34■■□□□ 1.17
CXCL16-201ENST00000293778 CBX1P83916 185 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 SEPT2Q15019 361 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 ATRIPQ8WXE1 791 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 UBXN4Q92575 508 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 HAS1Q92839 578 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 CNOT6LQ96LI5 555 aaKnown RBP22.34■■□□□ 1.17
CXCL16-201ENST00000293778 NUDT12Q9BQG2 462 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 SLC39A2Q9NP94 309 aa22.34■■□□□ 1.17
CXCL16-201ENST00000293778 B4DLN1 442 aa22.33■■□□□ 1.17
CXCL16-201ENST00000293778 MARCH6O60337 910 aa22.33■■□□□ 1.17
CXCL16-201ENST00000293778 TADA3O75528 432 aa22.33■■□□□ 1.17
CXCL16-201ENST00000293778 TMEM119Q4V9L6 283 aa22.33■■□□□ 1.17
CXCL16-201ENST00000293778 ZNF772Q68DY9 489 aaPredicted RBP22.33■■□□□ 1.17
CXCL16-201ENST00000293778 ACRBPQ8NEB7 543 aa22.33■■□□□ 1.17
CXCL16-201ENST00000293778 EEF2KMTQ96G04 330 aa22.33■■□□□ 1.17
CXCL16-201ENST00000293778 NAP1L4Q99733 375 aaKnown RBP22.33■■□□□ 1.17
CXCL16-201ENST00000293778 PCDHA1Q9Y5I3 950 aa22.33■■□□□ 1.17
CXCL16-201ENST00000293778 MRFAP1Q9Y605 127 aa22.33■■□□□ 1.17
CXCL16-201ENST00000293778 ZNF646O15015 1829 aaPredicted RBP22.33■■□□□ 1.16
CXCL16-201ENST00000293778 CHRNA5P30532 468 aa22.33■■□□□ 1.16
CXCL16-201ENST00000293778 AOC3Q16853 763 aa22.33■■□□□ 1.16
CXCL16-201ENST00000293778 ARHGAP29Q52LW3 1261 aa22.33■■□□□ 1.16
CXCL16-201ENST00000293778 TMEM179Q6ZVK1 233 aa22.33■■□□□ 1.16
CXCL16-201ENST00000293778 DYMQ7RTS9 669 aa22.33■■□□□ 1.16
CXCL16-201ENST00000293778 LRRC27Q9C0I9 530 aa22.33■■□□□ 1.16
CXCL16-201ENST00000293778 LUC7L2Q9Y383 392 aaKnown RBP22.33■■□□□ 1.16
CXCL16-201ENST00000293778 EFCAB8A8MWE9 144 aa22.32■■□□□ 1.16
CXCL16-201ENST00000293778 ICA1Q05084 483 aa22.32■■□□□ 1.16
CXCL16-201ENST00000293778 CDC37Q16543 378 aaPredicted RBP22.32■■□□□ 1.16
CXCL16-201ENST00000293778 OR8K1Q8NGG5 319 aa22.32■■□□□ 1.16
CXCL16-201ENST00000293778 CNKSR1Q969H4 720 aa22.32■■□□□ 1.16
CXCL16-201ENST00000293778 USP17L15C9J2P7 530 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 USP17L13C9JLJ4 530 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 USP17L11C9JVI0 530 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 USP17L18D6R9N7 530 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 USP17L22D6RA61 530 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 USP17L17D6RBQ6 530 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 USP17L19D6RCP7 530 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 USP17L20D6RJB6 530 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 MTIF2P46199 727 aaKnown RBP22.31■■□□□ 1.16
CXCL16-201ENST00000293778 USP17L24Q0WX57 530 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 USP17L6PQ6QN14 398 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 SIAH1Q8IUQ4 282 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 DNAJC7Q99615 494 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 SEMA6BQ9H3T3 888 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 CAPN11Q9UMQ6 739 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 MYH7BA7E2Y1 1941 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 H2AFXP16104 143 aaPredicted RBP22.31■■□□□ 1.16
CXCL16-201ENST00000293778 CENPPQ6IPU0 288 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 KCNK18Q7Z418 384 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 OGFRQ9NZT2 677 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 DDX41Q9UJV9 622 aaKnown RBP22.31■■□□□ 1.16
CXCL16-201ENST00000293778 PCDHA12Q9UN75 941 aa22.31■■□□□ 1.16
CXCL16-201ENST00000293778 PPP2R3AQ06190 1150 aa22.3■■□□□ 1.16
CXCL16-201ENST00000293778 ABCB5Q2M3G0 1257 aa22.3■■□□□ 1.16
CXCL16-201ENST00000293778 GJA10Q969M2 543 aa22.3■■□□□ 1.16
CXCL16-201ENST00000293778 GDF11O95390 407 aa22.3■■□□□ 1.16
CXCL16-201ENST00000293778 IDEP14735 1019 aa22.3■■□□□ 1.16
CXCL16-201ENST00000293778 TBC1D8BQ0IIM8 1120 aa22.3■■□□□ 1.16
CXCL16-201ENST00000293778 CHP1Q99653 195 aa22.3■■□□□ 1.16
CXCL16-201ENST00000293778 SLF1Q9BQI6 1058 aa22.3■■□□□ 1.16
CXCL16-201ENST00000293778 TDRD3Q9H7E2 651 aaKnown RBP22.3■■□□□ 1.16
CXCL16-201ENST00000293778 F5H6K3 240 aa22.29■■□□□ 1.16
CXCL16-201ENST00000293778 KLRC3Q07444 240 aa22.29■■□□□ 1.16
CXCL16-201ENST00000293778 ECM1Q16610 540 aa22.29■■□□□ 1.16
CXCL16-201ENST00000293778 TSR1Q2NL82 804 aaKnown RBP22.29■■□□□ 1.16
CXCL16-201ENST00000293778 ZNF569Q5MCW4 686 aa22.29■■□□□ 1.16
CXCL16-201ENST00000293778 GUF1Q8N442 669 aaKnown RBP22.29■■□□□ 1.16
CXCL16-201ENST00000293778 C7orf43Q8WVR3 580 aa22.29■■□□□ 1.16
CXCL16-201ENST00000293778 DDX12PQ92771 950 aa22.29■■□□□ 1.16
CXCL16-201ENST00000293778 NOC4LQ9BVI4 516 aaKnown RBP22.29■■□□□ 1.16
CXCL16-201ENST00000293778 NUP58Q9BVL2 599 aa22.29■■□□□ 1.16
CXCL16-201ENST00000293778 ANO3Q9BYT9 981 aa22.29■■□□□ 1.16
CXCL16-201ENST00000293778 USP11P51784 963 aa22.29■■□□□ 1.16
CXCL16-201ENST00000293778 GMCL1P1Q8NEA9 526 aa22.29■■□□□ 1.16
CXCL16-201ENST00000293778 EPN1Q9Y6I3 576 aaPredicted RBP22.29■■□□□ 1.16
CXCL16-201ENST00000293778 ENTPD3O75355 529 aa22.28■■□□□ 1.16
CXCL16-201ENST00000293778 HOXA7P31268 230 aaPredicted RBP22.28■■□□□ 1.16
CXCL16-201ENST00000293778 MIIPQ5JXC2 388 aa22.28■■□□□ 1.16
CXCL16-201ENST00000293778 RETREG2Q8NC44 543 aa22.28■■□□□ 1.16
CXCL16-201ENST00000293778 KDM3AQ9Y4C1 1321 aa22.28■■□□□ 1.16
CXCL16-201ENST00000293778 ATRNL1Q5VV63 1379 aa22.27■■□□□ 1.16
CXCL16-201ENST00000293778 NDUFA10O95299 355 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms