RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 DGKHQ86XP1 1220 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 VPS16Q9H269 839 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 AGLP35573 1532 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 TYW5A2RUC4 315 aaKnown RBP16.1■□□□□ 0.17
SEC16A-202ENST00000290037 MIER3Q7Z3K6 550 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 GPBP1Q86WP2 473 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 USP31Q70CQ4 1352 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 LDHAP00338 332 aaKnown RBP16.1■□□□□ 0.17
SEC16A-202ENST00000290037 HSPA1LP34931 641 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 EXOC3L4Q17RC7 722 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 LONRF2Q1L5Z9 754 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 NLGN1Q8N2Q7 840 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 GOLGA8JA6NMD2 632 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 PNMA1Q8ND90 353 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 BCORL1Q5H9F3 1711 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 TAP1Q03518 808 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 ISM2Q6H9L7 571 aa16.1■□□□□ 0.17
SEC16A-202ENST00000290037 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.1■□□□□ 0.17
SEC16A-202ENST00000290037 ELF2Q15723 593 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 TRIM72Q6ZMU5 477 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 MGEA5O60502 916 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 SERPING1P05155 500 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 TRIM50Q86XT4 487 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 KCND2Q9NZV8 630 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 PLCB4Q15147 1175 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 CCDC197Q8NCU1 140 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 CCDC160A6NGH7 325 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 NBPF20Q3BBV1 942 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 FAM167AQ96KS9 214 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 TEDDM1Q5T9Z0 273 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 RRAGAQ7L523 313 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 GBP5Q96PP8 586 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 STRIP2Q9ULQ0 834 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 COPB1P53618 953 aaKnown RBP16.09■□□□□ 0.17
SEC16A-202ENST00000290037 STX17P56962 302 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 DHX38Q92620 1227 aaKnown RBP16.09■□□□□ 0.17
SEC16A-202ENST00000290037 MYBL1P10243 752 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 MAP2K2P36507 400 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 JAK3P52333 1124 aa16.09■□□□□ 0.17
SEC16A-202ENST00000290037 DCTN3O75935 186 aa16.08■□□□□ 0.17
SEC16A-202ENST00000290037 NAA25Q14CX7 972 aa16.08■□□□□ 0.17
SEC16A-202ENST00000290037 SYDE1Q6ZW31 735 aaPredicted RBP16.08■□□□□ 0.17
SEC16A-202ENST00000290037 CARD6Q9BX69 1037 aa16.08■□□□□ 0.17
SEC16A-202ENST00000290037 ANKRD26Q9UPS8 1709 aa16.08■□□□□ 0.17
SEC16A-202ENST00000290037 PALM2Q8IXS6 379 aa16.08■□□□□ 0.17
SEC16A-202ENST00000290037 OVOS2A0A0J9YW53 1432 aa16.08■□□□□ 0.16
SEC16A-202ENST00000290037 OVOS2Q6IE36 1432 aa16.08■□□□□ 0.16
SEC16A-202ENST00000290037 RAB44Q7Z6P3 723 aaPredicted RBP16.08■□□□□ 0.16
SEC16A-202ENST00000290037 MIGA1Q8NAN2 632 aa16.08■□□□□ 0.16
SEC16A-202ENST00000290037 KIFC3Q9BVG8 833 aa16.08■□□□□ 0.16
SEC16A-202ENST00000290037 ARL1P40616 181 aaPredicted RBP16.08■□□□□ 0.16
SEC16A-202ENST00000290037 ARHGEF25Q86VW2 580 aa16.08■□□□□ 0.16
SEC16A-202ENST00000290037 ZNF354CQ86Y25 554 aa16.08■□□□□ 0.16
SEC16A-202ENST00000290037 PPP2R5DQ14738 602 aa16.08■□□□□ 0.16
SEC16A-202ENST00000290037 TFCP2L1Q9NZI6 479 aa16.08■□□□□ 0.16
SEC16A-202ENST00000290037 ORC6Q9Y5N6 252 aa16.08■□□□□ 0.16
SEC16A-202ENST00000290037 MMP1P03956 469 aa16.08■□□□□ 0.16
SEC16A-202ENST00000290037 SNCBQ16143 134 aa16.08■□□□□ 0.16
SEC16A-202ENST00000290037 ZMYND15Q9H091 742 aa16.08■□□□□ 0.16
SEC16A-202ENST00000290037 ARMT1Q9H993 441 aa16.08■□□□□ 0.16
SEC16A-202ENST00000290037 PDIA3P30101 505 aaKnown RBP16.07■□□□□ 0.16
SEC16A-202ENST00000290037 RSPH3Q86UC2 560 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 ACCSQ96QU6 501 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 EFCC1Q9HA90 598 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 SLC39A6Q13433 755 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 GEN1Q17RS7 908 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 ATG16L1Q676U5 607 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 A0A087WUV0 522 aaPredicted RBP16.07■□□□□ 0.16
SEC16A-202ENST00000290037 TLDC2A0PJX2 215 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 C16orf71Q8IYS4 520 aaPredicted RBP16.07■□□□□ 0.16
SEC16A-202ENST00000290037 DCAF4Q8WV16 495 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 NT5C1BQ96P26 610 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 LSM14BQ9BX40 385 aaKnown RBP16.07■□□□□ 0.16
SEC16A-202ENST00000290037 PALM3A6NDB9 673 aaPredicted RBP16.07■□□□□ 0.16
SEC16A-202ENST00000290037 TXKP42681 527 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 CDC42EP1Q00587 391 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 PIP4K2CQ8TBX8 421 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 TAF5LO75529 589 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 AFPP02771 609 aaKnown RBP16.07■□□□□ 0.16
SEC16A-202ENST00000290037 KRT81Q14533 505 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 PLS1Q14651 629 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 PCDHA7Q9UN72 937 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 P2RX5Q93086 422 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 PPP1R12AO14974 1030 aaPredicted RBP16.07■□□□□ 0.16
SEC16A-202ENST00000290037 HPDP32754 393 aaPredicted RBP16.07■□□□□ 0.16
SEC16A-202ENST00000290037 FBXO11Q86XK2 927 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 GRAMD1AQ96CP6 724 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 ANGPTL2Q9UKU9 493 aa16.07■□□□□ 0.16
SEC16A-202ENST00000290037 TMEM110-MUSTN1A8MSY1 372 aa16.06■□□□□ 0.16
SEC16A-202ENST00000290037 CLNS1AP54105 237 aaKnown RBP16.06■□□□□ 0.16
SEC16A-202ENST00000290037 SLC4A8Q2Y0W8 1093 aa16.06■□□□□ 0.16
SEC16A-202ENST00000290037 ARHGEF2Q92974 986 aaKnown RBP16.06■□□□□ 0.16
SEC16A-202ENST00000290037 MYCBPQ99417 103 aaPredicted RBP16.06■□□□□ 0.16
SEC16A-202ENST00000290037 TUBGCP2Q9BSJ2 902 aa16.06■□□□□ 0.16
SEC16A-202ENST00000290037 MYO3AQ8NEV4 1616 aa16.06■□□□□ 0.16
SEC16A-202ENST00000290037 TBC1D8O95759 1140 aa16.06■□□□□ 0.16
SEC16A-202ENST00000290037 VSTM4Q8IW00 320 aa16.06■□□□□ 0.16
SEC16A-202ENST00000290037 TNKSO95271 1327 aa16.06■□□□□ 0.16
SEC16A-202ENST00000290037 USP42Q9H9J4 1324 aaKnown RBP16.06■□□□□ 0.16
SEC16A-202ENST00000290037 PNPLA6Q8IY17 1366 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms