RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 TBC1D22AQ8WUA7 517 aa17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 PUS7LQ9H0K6 701 aaKnown RBP17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 C1orf112Q9NSG2 853 aa17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 FAF1Q9UNN5 650 aaPredicted RBP17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 THRAP3Q9Y2W1 955 aaKnown RBP17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 DAAM1Q9Y4D1 1078 aa17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 AZI2Q9H6S1 392 aa17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 TMEM51Q9NW97 253 aa17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 CD2APQ9Y5K6 639 aa17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 PRPF6O94906 941 aaKnown RBP17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 NLRX1Q86UT6 975 aa17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 CDAN1Q8IWY9 1227 aa17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 SLFN12Q8IYM2 578 aa17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 RETREG2Q8NC44 543 aa17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 PI4K2BQ8TCG2 481 aa17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 GJB4Q9NTQ9 266 aa17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 EIF4A3P38919 411 aaKnown RBP17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 PABPC4Q13310 644 aaKnown RBP eCLIP17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 PPP4R1Q8TF05 950 aa17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 NHEJ1Q9H9Q4 299 aaPredicted RBP17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 PRKAB2O43741 272 aa17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 TRAPPC10P48553 1259 aa17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 DHX9Q08211 1270 aaKnown RBP17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 ZBTB17Q13105 803 aa17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 CLEC11AQ9Y240 323 aa17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 ZBED4O75132 1171 aa17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 SATB1Q01826 763 aa17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 ARMCX5Q6P1M9 558 aa17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 DEPTORQ8TB45 409 aa17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 TESPA1A2RU30 521 aaPredicted RBP17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 SLCO1A2P46721 670 aa17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 BFSP1Q12934 665 aa17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 MAN2A1Q16706 1144 aa17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 SPDL1Q96EA4 605 aa17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 TMOD4Q9NZQ9 345 aa17.93■□□□□ 0.46
SH3RF1-201ENST00000284637 EVI5O60447 810 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 SLC12A2P55011 1212 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 GRM1Q13255 1194 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 XKR9Q5GH70 373 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 GPR108Q9NPR9 543 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 GJA3Q9Y6H8 435 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 PGRMC1O00264 195 aaKnown RBP17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 FAM133AQ8N9E0 248 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 OSBPL5Q9H0X9 879 aaPredicted RBP17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 MAGEF1Q9HAY2 307 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 BZW2Q9Y6E2 419 aaKnown RBP17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 ERVK-7P63135 1459 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 CFAP65Q6ZU64 1925 aaKnown RBP17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 SKIP12755 728 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 GABPB2Q8TAK5 448 aaPredicted RBP17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 RUNDC3BQ96NL0 473 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 YIPF3Q9GZM5 350 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 PCDHA4Q9UN74 947 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 AFG3L2Q9Y4W6 797 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 N4BP1O75113 896 aaKnown RBP17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 NXNQ6DKJ4 435 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 PANX2Q96RD6 677 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 PSD3Q9NYI0 1048 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 SASH1O94885 1247 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 ELF1P32519 619 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 ZBED6P86452 979 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 ACTN3Q08043 901 aaPredicted RBP17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 KRT81Q14533 505 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 EMBQ6PCB8 327 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 PGBD1Q96JS3 809 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 CUEDC2Q9H467 287 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 RWDD2AQ9UIY3 292 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 PPP1R9AQ9ULJ8 1098 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 PCDHA1Q9Y5I3 950 aa17.92■□□□□ 0.46
SH3RF1-201ENST00000284637 USP27XA6NNY8 438 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 UBAP1LF5GYI3 381 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 SH2B2O14492 632 aaPredicted RBP17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 CREB3O43889 395 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 LIG4P49917 911 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 CCDC144BQ3MJ40 725 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 FAM133BQ5BKY9 247 aaKnown RBP17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 ODR4Q5SWX8 454 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 CNPY4Q8N129 248 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 SOS2Q07890 1332 aaPredicted RBP17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 SORBS3O60504 671 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 IFNAR1P17181 557 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 PDCLQ13371 301 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 OTUD6AQ7L8S5 288 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 ZSWIM5Q9P217 1185 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 NSFP46459 744 aaKnown RBP17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 FKBP3Q00688 224 aaKnown RBP17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 IL9RQ01113 521 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 SNX1Q13596 522 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 HADHQ16836 314 aaKnown RBP17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 CNOT10Q9H9A5 744 aaKnown RBP17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 IRAK4Q9NWZ3 460 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 ATP7AQ04656 1500 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 HMGB1P1B2RPK0 211 aaPredicted RBP17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 CIAO1O76071 339 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 BTDP43251 543 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 CAPRIN2Q6IMN6 1127 aaKnown RBP17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 PAGE5Q96GU1 130 aa17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 NOVA2Q9UNW9 492 aaKnown RBP17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 SRPRBQ9Y5M8 271 aaKnown RBP17.91■□□□□ 0.46
SH3RF1-201ENST00000284637 MYO1FO00160 1098 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms