RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 DAPK3O43293 454 aa15.11■□□□□ 0.01
NPC1-201ENST00000269228 TMEM191BP0C7N4 346 aa15.11■□□□□ 0.01
NPC1-201ENST00000269228 SLFN14P0C7P3 912 aa15.11■□□□□ 0.01
NPC1-201ENST00000269228 Q3C1V9 767 aa15.11■□□□□ 0.01
NPC1-201ENST00000269228 TRERF1Q96PN7 1200 aa15.11■□□□□ 0.01
NPC1-201ENST00000269228 NAP1L3Q99457 506 aaPredicted RBP15.11■□□□□ 0.01
NPC1-201ENST00000269228 IFIH1Q9BYX4 1025 aaKnown RBP15.11■□□□□ 0.01
NPC1-201ENST00000269228 C1orf112Q9NSG2 853 aa15.11■□□□□ 0.01
NPC1-201ENST00000269228 SMIM23A6NLE4 172 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 INO80B-WBP1J3KQ70 363 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 YWHAEP62258 255 aaKnown RBP15.1■□□□□ 0.01
NPC1-201ENST00000269228 EZH2Q15910 746 aaKnown RBP15.1■□□□□ 0.01
NPC1-201ENST00000269228 SESTD1Q86VW0 696 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 APOBEC3FQ8IUX4 373 aaKnown RBP15.1■□□□□ 0.01
NPC1-201ENST00000269228 INO80BQ9C086 356 aaPredicted RBP15.1■□□□□ 0.01
NPC1-201ENST00000269228 RAVER2Q9HCJ3 691 aaKnown RBP15.1■□□□□ 0.01
NPC1-201ENST00000269228 PNMA3Q9UL41 463 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 IQGAP1P46940 1657 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 USP42Q9H9J4 1324 aaKnown RBP15.1■□□□□ 0.01
NPC1-201ENST00000269228 TFDP1Q14186 410 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 ARHGEF6Q15052 776 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 PPP2R5AQ15172 486 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 PPM1KQ8N3J5 372 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 EPSTI1Q96J88 318 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 APOL6Q9BWW8 343 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 DAGLAQ9Y4D2 1042 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 DCCP43146 1447 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 TLDC2A0PJX2 215 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 RCSD1Q6JBY9 416 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 NACA2Q9H009 215 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 SRPRBQ9Y5M8 271 aaKnown RBP15.1■□□□□ 0.01
NPC1-201ENST00000269228 USP32Q8NFA0 1604 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 F5H6K3 240 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 KLRC3Q07444 240 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 CCDC26Q8TAB7 109 aa15.1■□□□□ 0.01
NPC1-201ENST00000269228 PNPLA7Q6ZV29 1317 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 ITSN1Q15811 1721 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 PALM3A6NDB9 673 aaPredicted RBP15.09■□□□□ 0.01
NPC1-201ENST00000269228 USP17L15C9J2P7 530 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 USP17L13C9JLJ4 530 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 USP17L11C9JVI0 530 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 USP17L18D6R9N7 530 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 USP17L22D6RA61 530 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 USP17L17D6RBQ6 530 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 USP17L19D6RCP7 530 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 USP17L20D6RJB6 530 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 AKR1B1P15121 316 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 POLR2FP61218 127 aaKnown RBP15.09■□□□□ 0.01
NPC1-201ENST00000269228 PPP2R3AQ06190 1150 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 USP17L24Q0WX57 530 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 MTERF2Q49AM1 385 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 USP17L6PQ6QN14 398 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 IQCDQ96DY2 449 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 FER1L4A9Z1Z3 1794 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 CEP104O60308 925 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 CHGBP05060 677 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 ABCB4P21439 1286 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 NR2F2P24468 414 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 TUBB4BP68371 445 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 PFKFB3Q16875 520 aaPredicted RBP15.09■□□□□ 0.01
NPC1-201ENST00000269228 RNF187Q5TA31 235 aaPredicted RBP15.09■□□□□ 0.01
NPC1-201ENST00000269228 STRIP1Q5VSL9 837 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 INTS5Q6P9B9 1019 aaKnown RBP15.09■□□□□ 0.01
NPC1-201ENST00000269228 STK17AQ9UEE5 414 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 N4BP1O75113 896 aaKnown RBP15.09■□□□□ 0.01
NPC1-201ENST00000269228 PLCG1P19174 1290 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 EVCP57679 992 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 TIGD1Q96MW7 591 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 SH3GLB2Q9NR46 395 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 ZBTB12Q9Y330 459 aaPredicted RBP15.09■□□□□ 0.01
NPC1-201ENST00000269228 SLC15A2Q16348 729 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 DPCR1Q3MIW9 517 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 DEFB132Q7Z7B7 95 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 CNOT6LQ96LI5 555 aaKnown RBP15.09■□□□□ 0.01
NPC1-201ENST00000269228 NBPF3Q9H094 633 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 KMT5AQ9NQR1 393 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 HOXC10Q9NYD6 342 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 SUGT1Q9Y2Z0 365 aa15.09■□□□□ 0.01
NPC1-201ENST00000269228 MEGF6O75095 1541 aa15.08■□□□□ 0.01
NPC1-201ENST00000269228 GAP43P17677 238 aa15.08■□□□□ 0.01
NPC1-201ENST00000269228 JPH2Q9BR39 696 aaPredicted RBP15.08■□□□□ 0.01
NPC1-201ENST00000269228 MXD3Q9BW11 206 aa15.08■□□□□ 0.01
NPC1-201ENST00000269228 MYCP01106 439 aaPredicted RBP15.08■□□□□ 0
NPC1-201ENST00000269228 CDC27P30260 824 aa15.08■□□□□ 0
NPC1-201ENST00000269228 MICALL2Q8IY33 904 aa15.08■□□□□ 0
NPC1-201ENST00000269228 RETREG2Q8NC44 543 aa15.08■□□□□ 0
NPC1-201ENST00000269228 FEM1BQ9UK73 627 aa15.08■□□□□ 0
NPC1-201ENST00000269228 PCDHA6Q9UN73 950 aa15.08■□□□□ 0
NPC1-201ENST00000269228 PCDHA8Q9Y5H6 950 aa15.08■□□□□ 0
NPC1-201ENST00000269228 MROH2AA6NES4 1674 aa15.08■□□□□ 0
NPC1-201ENST00000269228 ERCC5P28715 1186 aaPredicted RBP15.08■□□□□ 0
NPC1-201ENST00000269228 SNRNP48Q6IEG0 339 aaKnown RBP15.08■□□□□ 0
NPC1-201ENST00000269228 PDXDC2PQ6P474 469 aa15.08■□□□□ 0
NPC1-201ENST00000269228 CCDC51Q96ER9 411 aa15.08■□□□□ 0
NPC1-201ENST00000269228 CTTNQ14247 550 aaKnown RBP15.08■□□□□ 0
NPC1-201ENST00000269228 C12orf60Q5U649 245 aa15.08■□□□□ 0
NPC1-201ENST00000269228 PEX26Q7Z412 305 aa15.08■□□□□ 0
NPC1-201ENST00000269228 OTUD5Q96G74 571 aa15.08■□□□□ 0
NPC1-201ENST00000269228 TXNDC16Q9P2K2 825 aa15.08■□□□□ 0
NPC1-201ENST00000269228 WDR19Q8NEZ3 1342 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms